Pungitius pungitius (ninespine stickleback): 119221764
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Entry
119221764 CDS
T07626
Symbol
acin1b
Name
(RefSeq) apoptotic chromatin condensation inducer 1b isoform X1
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
ppug03015
mRNA surveillance pathway
ppug03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119221764 (acin1b)
09122 Translation
03013 Nucleocytoplasmic transport
119221764 (acin1b)
03015 mRNA surveillance pathway
119221764 (acin1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119221764 (acin1b)
03041 Spliceosome [BR:
ppug03041
]
119221764 (acin1b)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
119221764 (acin1b)
Spliceosome [BR:
ppug03041
]
Complex C
Other components
EJC/TREX
119221764 (acin1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RSB_motif
SAP
Motif
Other DBs
NCBI-GeneID:
119221764
NCBI-ProteinID:
XP_037333723
LinkDB
All DBs
Position
1:4143195..4159841
Genome browser
AA seq
1272 aa
AA seq
DB search
MADEDITLDGKPLQSLRVADLKLALEQRNLPKSGQKNALLKRLKGALMLENLQKSSSSHS
GLQPNSQIGEEMSQNSFIKQYLAKQQELLRQRLEREAQQEEEAEESPAVVEEDEDHSEDN
DCSPYVSDKKHPKIPPKPSMTRADEGKAGGELVMGHVMMACGPASGPGPILHPQEFSEAP
GVRMQRGTFHQGHKEPPAPSPPRAVASLSVRVLGQPDRQGLPPVVPRAQEKEGTAPSEPG
SAHPVLHLSRSAGVSGGGGGGGGGQAPEDSDDDDDDDESEDDEDWGPGPGGARRGNRAPP
QPQQIPPSAPSTVARSKRKLQPPQHIPPPQVHHTPMQLRHPTPPPSPPPDLFPLPDTPKQ
SPPDTDDQEGEAPEASCGPRVPPFPPSTMQRQDSDSSSRSSSPEPSINRRPGPLSLLVHK
MESEGAFRAAEASAAVDMSGQTAHSAAGSATSSESSLLRMERKRLQENREVEEERRLKEE
KEREQHQKQERERKKVQEQEREKKRLEEEKEKERKRLEEEEKQRQKEERENERKRQQEEK
ERERKHQQEEKERERKQQQEDKEKEKKQEEKRREEKLLKEKSQETASKGKVAVTEAQDSG
SSSDSDSKSDSSSQSSSSSCGDKIIPVKKLKKAERDAEDEKNPNGNKAERQFLSKREVSE
PSAAAATEAEPDTEGSNAQQPPSGADPENSEARLEESTTPKAFAARKISLTSSKTSPAAA
DGAAGETDAGTAAGRKRRWGSSTAVTAKKPSISITTDSLKSLIPDIKVNQEAVVELNPEE
LQMSGDEDGMDTSRGDQDKGLKIRRTVTQVVSGDGQENGQVNEEEEEGEEADVAEKERPR
RTSRDKRKDGVSEDASQTPAPVKLEAEPKKVTPSDSLVRRSISQQKSGVSVTLDDPVRAA
RQPSPPHGKVSNIIHVINLVRPFTLGQLKELLNRTGAVVEEGFWIDKIKSHCYVTYATSE
EAVATRAALHGVKWPPSNPKVLRVDFCEQDQLDIQKGIVKPEREEDHVPPPAGPLPRLPP
LMPEREHERDRGAAGVRDLWAERQREMERRERARGEREWDRDKIREFARPGEDEPRSRSR
DRERRRRERAKSKERKTDKKATEKPDEPPVKLLDDLFLKTKAAPCIYWLPLSEEQAVQRL
LDRTERQKERERRRKEQQEEEEKKREEERKERLKGREKEGGAASVGGAVAAAGTASVGAA
GRGGGERERERGGDRERERGGERSRERERDGDRSRDRDGDKKRDDSSRPRRPSAGAGGRR
SRSRSNPRDRRR
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagatattacgcttgatgggaaacctctacaatcgctgcgagtggcggat
ttaaaactcgccctggagcaaagaaacctcccgaagagcgggcagaaaaatgctctcctc
aagcgactgaaaggggctctgatgctggaaaatcttcagaagtcatcctcctctcacagt
gggctgcagcccaactctcagatcggtgaggagatgagccagaatagcttcataaaacag
tacctggccaagcagcaggagctcctccgccagagactggagagagaagctcaacaagag
gaggaggcagaagaaagcccagcagtggtggaggaagatgaagaccactcggaggacaat
gactgctctccctatgtctctgacaagaagcatcccaaaatcccccctaagccgtcaatg
acaagggcagacgagggcaaagcaggaggagagctagtgatgggtcatgtgatgatggca
tgcggccccgcctctggccccggccctatccttcacccccaggagttcagtgaggctccc
ggagtaaggatgcagcgaggcacctttcaccaaggacataaggaaccgccggccccatct
cctccccgcgctgtagcctcgctgtcggtgcgcgtcctgggtcagcctgaccgccagggt
ctgccccccgtagtaccccgagcccaggagaaagagggcactgcaccgagtgagcctgga
tccgctcatcccgtgctccaccttagccgttctgccggagtgtcaggaggaggaggagga
ggagggggaggtcaggcccccgaggacagtgatgatgacgacgatgatgacgagagcgag
gatgacgaggattggggacccggccctggcggggcgcgcagggggaatcgagcgcctcct
cagccgcagcagatacctccgagcgccccgtcaacagttgcgagatccaaacgcaagctt
cagcctccgcagcacatcccacctccacaggtacaccacacaccaatgcaactgcgccac
cccactcctcctccctctccacctcctgacttgtttcccctacctgacactcccaaacag
agcccaccagacacagacgaccaggaaggagaagcccccgaggcttcatgtggtccgagg
gtgccacccttcccaccttccaccatgcagaggcaagactctgactccagctctcgctcc
agcagtcctgagccctctataaatcgcaggccagggcccctttctctgctggtacacaag
atggagtcagagggggcttttcgtgcagcagaggcctccgctgctgtggatatgtctggg
cagaccgcacactccgctgctgggtccgccacttccagtgaatcttcactgctcagaatg
gagagaaagaggctccaagagaacagagaagtggaggaagaaaggcgcctgaaggaggag
aaagagagggagcaacaccagaagcaagagagagaaaggaagaaggtccaagaacaggag
agagagaagaaacgcttggaagaagagaaggaaaaggagaggaaacggctggaagaggag
gagaaacagcgtcagaaagaggagcgagagaatgagagaaaacgccagcaagaggaaaag
gaaagggagaggaaacaccagcaagaagaaaaggaaagggagaggaaacaacagcaagag
gataaagaaaaagagaaaaaacaagaggagaagagaagggaggagaaactgctcaaggaa
aagagccaggagacggccagcaaaggaaaggtggccgtgaccgaggcccaagactccggt
tcctcctcagattctgactccaaatcagactcttcttcccaatcgtcttcttcctcctgt
ggggataaaatcatccccgtcaaaaagctgaagaaggccgagcgtgatgcagaggatgag
aaaaaccccaacgggaacaaggcagagagacaatttctttccaaaagggaggtgtccgag
cccagcgcagcagcagcgacggaggcggagccagacaccgagggctccaacgcccagcag
ccgccctccggggcggacccggagaacagcgaggctcgtctggaggagagcaccactccg
aaggcctttgctgctcgcaagatatccttgaccagcagcaagacgtctccagccgccgcg
gatggggcagccggcgagacggacgcggggactgcagccgggaggaagaggcggtggggc
tccagcacagcggtcaccgccaagaagccgtccatcagcatcaccaccgactcgctgaag
tctctgatcccggacatcaaggtgaaccaggaggcggtggtggagctgaaccccgaggag
ctgcagatgtccggggacgaggacggcatggacaccagccggggcgaccaggacaaaggc
ctcaagatcagacgcaccgtcacgcaggtcgtctctggtgacggccaagaaaacggacag
gtgaacgaggaggaggaggagggcgaggaggcggacgtagcggagaaagagcgaccacgt
cgaacctccagagacaagcggaaggacggcgtgtccgaggacgcctcgcagaccccggcg
cccgtcaagctggaggcggagccaaagaaagttaccccgagcgacagtcttgtgcgccgc
tccatcagccaacagaagtccggcgtgtcggtgaccctcgacgaccccgtccgcgcggcg
cgccagccctcgccgcctcacggcaaagtctcaaacatcatccacgtcatcaatctggtg
cgacccttcaccctgggccaactcaaagagctgctgaacaggacgggcgccgtggtggag
gagggcttctggatcgacaagatcaagtctcactgctacgtcacctacgccacctcagag
gaggcggtcgccaccagagccgccctgcacggggtcaaatggcctccgagcaatcccaaa
gtcctcagggtggacttctgtgagcaggatcagctggacattcaaaaaggcatcgtgaag
ccagaaagggaggaggaccacgtgcccccaccggccggtccgctgccccggctccccccc
ctgatgcccgagcgggagcacgagagggaccgaggcgcggcgggagtgcgggacctgtgg
gcggagcgccagagagagatggagcgccgagaacgggcccgcggcgagcgggaatgggac
cgcgataagatccgcgagttcgccaggccgggggaagacgagccgcggtcccggtccagg
gaccgagagcggaggaggagagagcgggccaagagcaaggagaggaagaccgacaagaag
gcgacagagaaacccgacgagcctcctgtgaagctgctcgacgacttgttcctgaagacc
aaagcggcgccgtgcatctactggctcccgctctccgaggagcaggcggtgcagaggctt
ctggaccgcacggagcgccagaaggagcgcgagcggcggcgcaaggagcagcaagaggag
gaggagaagaagcgggaggaggagaggaaggagaggctgaagggccgggagaaggagggc
ggggcggcgagcgtcgggggggcggtggcggcggcagggaccgcgagcgtcggggcagcc
gggcgcggcggcggcgagagagagcgggaacgcggcggcgacagagagagggaacgcggc
ggcgagcgcagccgcgagagagagagggacggggaccgcagccgagacagggacggggac
aagaagagggacgacagcagccgcccccggcggccctccgcgggcgccggcggacgccgc
tcccgtagccgtagcaaccccagggataggcgccgctga
DBGET
integrated database retrieval system
