Pungitius pungitius (ninespine stickleback): 119221824
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Entry
119221824 CDS
T07626
Symbol
rarga
Name
(RefSeq) retinoic acid receptor gamma-A isoform X1
KO
K08529
retinoic acid receptor gamma
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119221824 (rarga)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ppug03310
]
119221824 (rarga)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119221824 (rarga)
Nuclear receptors [BR:
ppug03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
119221824 (rarga)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
119221824
NCBI-ProteinID:
XP_037333823
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Position
1:complement(31372312..31411438)
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AA seq
509 aa
AA seq
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MATNREQQVGHMTGFPPAVYPFAFNSMRSHSPFDLLANSSLFGRFGADLPKEMAALSVET
QSTSSEEMVPSSPSPPPPPRVYKPCFVCQDKSSGYHYGVSSCEGCKGFFRRSIQKNMVYT
CHRDKNCQINKVTRNRCQYCRLQKCFEVGMSKEAVRNDRNKKKKDVKEELVLPESYELSG
ELEELVNKVSKAHKETFPSLGQLGKYTTNSSSDTRVQLDLGLWDKFSELSTKCIIKIVEF
AKRLPGFTTLTIADQITLLKSACLDILMLRICTRYTPEQDTMTFSDGLTLNRTQMHNAGF
GPLTDLVFAFAGQLLPLEMDDTETGLLSAICLICGDRMDLEEPQKVDKLQEPLLEALKIY
ARRRRPNKPHMFPRMLMKITDLRGISTKGAERAITLKMEIPGPMPPLIREMLENPEAFED
QTEGNESPPPPPPPPPPPAPPAQVKQEAEDEEDSWATENGSEPSPEEDEDEDEDAGDEDR
DRGSDSDGEPWGVLDGADGSRKGLVGRAQ
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggctaccaacagggaacagcaggtgggtcacatgaccggcttcccacctgctgtctat
cccttcgccttcaactccatgagaagccactcccccttcgacctgctggccaacagcagc
ctgtttgggagatttggtgctgaccttcccaaagagatggccgctctctcggtggagacc
cagagcaccagctcagaggagatggtacccagttctccgtctccacctcccccacctcgt
gtctacaagccctgctttgtgtgccaggacaagtcttcggggtaccactacggggtcagc
tcctgtgagggctgcaagggtttcttccgacggagtatccagaagaacatggtgtacacc
tgccacagagacaagaactgtcagatcaacaaggtcacacgcaaccgctgccagtactgc
cggctgcagaagtgctttgaggtcggcatgtccaaggaagcggtgcgcaacgacagaaac
aagaagaagaaggatgtgaaggaggagttagtgcttccagagagctatgagctaagtgga
gaactcgaggagttggtcaataaagtcagcaaagctcacaaagaaaccttcccgtcactt
ggccaattgggcaaatacaccaccaactccagctcagacacccgggtccagctggatctg
ggtttgtgggacaagttcagtgagctgtccaccaaatgcatcatcaagattgtggaattt
gccaaacggctgcccggtttcaccaccctcaccatcgctgaccagatcaccctgctgaag
tcggcctgtctggacatactgatgctgaggatctgcacacgctacactccagagcaggac
acgatgaccttctcagacggcctgactctgaaccggacccagatgcacaacgccggtttt
ggacctctcacagacctggtgttcgcctttgccggccagcttctacccctggagatggac
gacacagagactggactcctgagcgccatctgcctcatctgtggagaccgcatggatctc
gaggagccccagaaagtggacaagctgcaagagcctctgcttgaggctctgaagatctac
gcccgtcgccgtcgccccaacaaacctcacatgtttccccgcatgctgatgaagatcact
gacctgcggggcatcagcaccaagggcgcagagagagccatcactctgaagatggagatc
ccggggccaatgcctcctttgatcagggagatgctggagaacccagaggcctttgaggac
cagacagagggcaacgagagcccgccccctccgccacccccgccgcccccgcctgcgccg
ccggcgcaggtcaagcaggaggcggaggacgaggaagacagctgggccaccgagaacggc
agcgagccatcgccggaagaggacgaagacgaggacgaggacgcgggggacgaggatcgg
gacaggggctcggacagtgacggggagccctggggcgtgctggacggcgccgacgggtcg
aggaagggcctcgttgggagggcgcagtga
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