Pungitius pungitius (ninespine stickleback): 119221902
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Entry
119221902 CDS
T07626
Symbol
rbm15
Name
(RefSeq) RNA-binding protein 15
KO
K13190
RNA-binding protein 15
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119221902 (rbm15)
03041 Spliceosome [BR:
ppug03041
]
119221902 (rbm15)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
119221902 (rbm15)
Spliceosome [BR:
ppug03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119221902 (rbm15)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
SPOC
RRM_3
Nup35_RRM_2
RRM_7
RRM_10
Motif
Other DBs
NCBI-GeneID:
119221902
NCBI-ProteinID:
XP_037333991
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All DBs
Position
1:28949494..28957061
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AA seq
851 aa
AA seq
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MKGKERSPIKKRSRALDDIRDRGGCHPTSKKMGALSVSSGSNNGNSSTKSDGGSTRRSLL
GEKRDRDFDGHSRTANNHSCQSAAASSIGKNHNLSLTLDLASPRTASRGEQRVQPPSTES
EYKTLKISDLGTQLSDEDIEDGLFHEFKKFGDVSVKISRSNDERIAFVNFRKPEDARAAK
HARGRLVLYDRPLKIEAVYINRRRSRSPVERDLYGAAQGHRHLQRPLSPTGLGYRDYRLQ
QLALGRLPPPPPPPPLPRELEREREFALFEARARPAFIAERAAFREEDFISPEDDQRANR
TLFLGNLDISVTEADLRRAFDRFGVITEVDIKRPTRGQTSTYGFLKFENLDMAHRAKLSM
SGKIVGHNPIKIGYGKATPTTRLWVGGLGPWVPVAALAREFDRFGTIRTIDYRKGDTWAY
IQYESLDAAQAACTHMRGFPLGGPERRLRVDFADTEHRYQQQFLQPLPIPPFDMVAESFV
HRATPEPLRVRERTPPPLHFRERELFPGTEWPNPAIRDRVRASPFEPLEHLERERRAREP
WSLERELQGREPARKRRLMEDGRHLDHSPDSTERTVRRRRASPDGSPGGSSRDGGRFSDS
ERPLRAERPSPAQERHGSLERGVAERRLKSQILSDKGAPSSTVSAVGERKRKAGDVGKGP
AKRERSEINSKGGQLSKPVGTKLGLAWHGMLLLKNSNFPANMHLLEGDHNVASDLLIEGT
SGRQVSELKITQRLRLDQPKLDEVSRRIKVAGPGGYAILLAVPGTTEDSSTSDPAASTQR
PLRNLVSYLNQKQAAGVISLPVGGSRDKDNTGVLHAFPPCDFSQQFLDSSAKALAKSEED
YLVMIVVRGAS
NT seq
2556 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtaaagagcggtcgccgatcaaaaaacgctcccgggccttggacgatatacga
gacaggggaggatgccacccgaccagcaagaaaatgggggctctctccgtttccagtggg
agtaataatggaaatagctcgaccaaaagcgacggcggctcgacgagaaggagtttactc
ggggaaaaaagagacagggactttgacggccacagtcggactgcaaataaccacagttgt
cagtcagctgccgccagctccatcggcaaaaaccacaacctaagcctgacgctggactta
gcctcgccgaggaccgcttcccggggggagcagcgggtgcagccgcccagcaccgagagt
gagtacaaaaccctcaaaataagcgacctcggcacccagctgagcgacgaagacatagag
gacggactctttcacgagtttaaaaaattcggcgacgtgagcgttaaaatcagccgtagc
aacgacgagcggatagccttcgtgaacttcaggaagccggaggacgcccgcgccgccaag
cacgcgagggggcggttggtgctctacgatcgtccgttaaaaatcgaggcggtgtacatc
aaccggaggagaagccgctccccggtggagagggacctgtacggcgcggctcaaggccac
agacacttgcagagacccctctcgcccaccgggctcggatacagagactaccggctgcag
cagctggccctggggcggctcccgcctcccccgccgccgccgcctttgccccgagagctg
gagcgggagcgggagttcgccctgttcgaggcccgggcgcgtccggctttcatagcggag
cgagcggcgttccgtgaggaggatttcatatcgccagaagacgaccaaagagccaacagg
acgttgtttttaggcaacctggacatttccgtcaccgaggcagacctgaggagagctttt
gacaggttcggggtcatcaccgaggtggacatcaaaagacccacgcgaggacagaccagc
acgtatggatttctgaaatttgagaatcttgacatggcccaccgggctaaacttagtatg
tcgggcaaaatagtaggccacaaccccataaagataggttatgggaaagctactcccacc
acgcgcctttgggtgggtggactgggaccctgggtacctgtagctgccctagcgagagag
tttgaccgctttggcaccataaggaccattgactacagaaagggggacacttgggcctac
atccagtacgaaagtttggatgccgcacaggcggcatgcacacacatgaggggctttccg
ctgggaggtccagagagaagacttcgagtagactttgctgacactgagcatcgttaccag
cagcagttcctgcagcctctcccaatcccaccgtttgacatggtggccgaatcatttgtc
catcgtgcaacacctgaacccctgcgggtcagggaacggactccaccgccacttcacttt
agggaaagagagctctttcctggaactgagtggcccaatccagctattcgtgatcgggta
cgcgcttcccctttcgagcccctggagcacttggaacgtgagcggcgggcgcgggagccg
tggtctctggagcgagagctgcagggacgagaacctgcacgcaaacggcgcttaatggag
gacggacgccacttagaccactctcctgacagcacggagaggacagtgaggcgtaggcgt
gcttctccagatggcagtcctggaggcagcagcagagatggcgggcgcttcagcgactcg
gagcgccctctgcgggccgagagaccctctccagcacaagaacgtcacggcagcctggaa
agaggtgtggccgagcggagactcaaaagccagatactctccgacaagggcgcgccaagc
agcaccgtttcagcggttggagagcgcaagcgcaaagccggcgacgttggtaaagggccg
gccaaaagagaacgttctgagatcaattccaagggaggccagctgtccaaacccgtcggc
acaaaactcggcttggcctggcacggtatgctgctgctcaagaacagcaatttcccagcc
aacatgcacctgctggagggcgatcacaacgtggccagcgacctgctcatcgagggcacc
tccgggcggcaggtgagcgagctcaagatcacccaacgtctccgtctggaccagcccaag
ctcgacgaggtgtcccggcgcatcaaggtggcgggtcccggtggctacgccatcctgctg
gcagttcctggcaccacagaggattcgtctacgtccgaccccgcggcctccactcagcgc
ccgctccgtaacctggtgtcctacctcaaccaaaaacaagccgcgggagtcatcagccta
cctgtgggagggagcagagataaggacaacacgggggtgcttcatgctttccccccctgt
gatttctcccagcagttcctggattcctctgccaaagctctggctaaaagtgaagaggac
tatttggtcatgattgtggttcgtggagcatcttaa
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