Pungitius pungitius (ninespine stickleback): 119221948
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Entry
119221948 CDS
T07626
Symbol
brpf1
Name
(RefSeq) peregrin isoform X1
KO
K11348
bromodomain and PHD finger-containing protein 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ppug03036
]
119221948 (brpf1)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
119221948 (brpf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-HC5HC2H_2
EPL1
zf-HC5HC2H
Bromodomain
PWWP
PHD_2
PHD
PHD_NSD
PHD-1st_NSD
Motif
Other DBs
NCBI-GeneID:
119221948
NCBI-ProteinID:
XP_037334082
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All DBs
Position
1:complement(15824915..15834710)
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AA seq
1296 aa
AA seq
DB search
MGLDFDVKTFCHNLRATKPPYECPVETCRKVYKSYSGIEYHLYHYDHDNPTPAQTLPQKR
RKGRPPRASLAGSGDTDDGGGNGGGGPGHGGNTPHSPSRSDRSHSPGRETMTYAQAQRMV
ELEFQGRLHRISIFENIDVVSEEDSDAEDTPPSGTGGGGSGGVCNGGDGGAGGSELGGGG
KDRPDVPSSNGGKSTPKSGKQKGKEKKKDGSSHHHSVQSGPAVKLPEAVFRELDQERPDA
PPRPSSYYRYIDKSVEELDEEVEYDIDEEDYIWLDIMNDKRRRDAVTPIPQEVFEYLMDR
LEKESYFESHNKADPSTLIDEDAVCCICNDGECQNSNVILFCDMCNLAVHQECYGVPYIP
EGQWLCRRCLQSPSRAVDCALCPNKGGAFKQTDDARWAHVVCALWIPEVCFANTVFLEPI
DSIEHIPPARWKLTCYICKQRGSGACIQCHKANCYTAFHVTCAQQAGLYMKMEPVRETGA
NGTSFSVRKTAYCDIHTPPGSARPLAGGQGCASMGSSNSDGELDDDDEPSICQDDDSKGW
SSERAKRAKAKSRLKMKRARKILAERRAAAPVVSVPCIPPHRLSKITSNLTVPRKSQFMQ
RLHSYWTLKRQSRNGVPLLRRLQTHLQSQRHIDPPTPQQPPSLLPPVSCAIRDGEEKASA
LKEQLKAWQRLRHDLERARLLVELIRKREKLKRETIKVQQMALEMQLTPFLVLLRSTLEQ
LQERDINNFFTEPVPLAEVPDYLDHIDTPMDFQTMWNLLESHRYLTFEAFESDFGLIVNN
CLKYNAKDTVFYRAALRLREMGGAVMRTARRHAERIGFDYEAGLHLPREPSPDGQRDQER
ERERERDREWERERERERERDRERDRDHPLSSNEDADLLLPENRRRLPVEEQLHYLQARL
DEVSLGKHSIGQSRRAKALRKEISIIKRKLAHQREGGAGIGGREAAGGGDRGSSLPHHPS
SSGHHDEGGESSSQEIGGKDMSVSSSALAPEVGRRTSVLFSKKNQKMAGPPKRPGRPPKN
RDAVYAAAGLGQSPIGPPQLPLLSPSRQRKRPRSPRTSSSSDSDSDDDDLLPGLPSNGFD
GGNQPVTESFLVYRSESRLPRSSSDSESTTSSSSSAASDRTSTTPSKQGRGKASFSRSAF
PEDSSEETSGTENDSYSVGGPRSVSHSLDLVWAKCRGYPSYPALIIDPKMPREGVFHRGV
PIPVPPLDVLKLGEQMTQEAREHLFLVLFFDNKRTWQWLPRSKLVPLGVDQELDKEKMLE
GRKSNIRKSVQVAYHRAMQHRSKVQGDPSSETSDSD
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atggggctggactttgacgtaaagaccttctgccacaatctgcgggccaccaagccccct
tacgagtgccccgtggagacctgccgtaaggtctacaagagctacagtggcatcgagtat
cacctctaccactatgaccacgacaacccgacgcccgcgcagactctgccccagaagagg
agaaaggggcggcctcctcgcgcctccttggccggctccggggatacggacgacggcggg
ggcaacgggggcggaggacccggccacggggggaacacgccgcatagccccagccggtcg
gaccgctctcactccccgggcagagagaccatgacctacgcccaggcccagcgcatggtg
gagctggagtttcaaggacgcctccaccgcatcagcatctttgagaacatcgacgtggtg
tcggaggaggacagcgacgcggaggacacccctccgtccggtacgggaggcggcggcagc
ggaggcgtgtgcaacggcggcgacggcggagccggcggcagcgagctgggagggggtggc
aaggaccggccagacgtcccatcctccaacggtggcaaatccacccccaagtccgggaag
caaaaaggcaaagagaagaagaaggacggctcgtctcaccatcacagcgtccagtcgggc
cccgcggtcaagctccccgaggcggtgttcagagagctggaccaagagaggccggacgcc
cccccccgaccatcgtcctactacaggtacatcgataagtcggtggaggagctggacgag
gaggtggagtacgacatcgacgaggaagactacatctggctcgacatcatgaacgacaag
cggcggcgtgacgccgtgacgcccatcccccaggaggtctttgaatacctcatggaccgc
ttggagaaggagtcctacttcgagagccacaacaaggcagaccccagcaccctgatcgac
gaggacgccgtctgctgcatctgcaacgacggcgagtgccagaacagcaacgtgatcctc
ttctgcgacatgtgcaacctggcggtgcaccaggagtgctacggcgtgccgtacatcccg
gagggccagtggctgtgccgccgctgcctgcagtcgccgagtcgcgccgtggactgcgcc
ctgtgtcccaacaaggggggcgccttcaagcagacggacgacgcgcgctgggcccacgtc
gtgtgcgccctctggatcccggaggtctgcttcgccaacaccgtcttcctggagccgatc
gacagcatcgagcacattccccccgcccgctggaagctcacctgctacatctgcaagcag
cgcggctccggcgcctgcatccagtgccacaaagccaactgctacaccgccttccacgtc
acctgcgcccagcaggcgggcctctacatgaagatggagcccgtccgagagacgggggcc
aacggcacgtccttcagcgtccgcaagacggcgtactgcgacatccacacgccgcccggc
tcggcccggcccctggcgggggggcagggctgcgccagcatgggctcgtcgaacagcgac
ggggagctggacgacgacgacgagccgagcatctgccaggacgacgactccaagggctgg
agctccgagcgggccaagagggccaaggccaagtcccggctgaagatgaagagggcgcgg
aagatcctggcagagaggagagcggccgcgccggtggtgtctgtgccctgcatacctccc
cataggctcagcaaaatcaccagcaacctgacggtgcccaggaagagccagttcatgcag
cggctccacagctactggacgctgaagaggcaaagtcgcaacggtgtcccgctgctgcgc
cggctgcagacccacctgcagtcccagcggcacatcgaccccccgacgccacagcagcct
ccgtcgctgctcccgccggtgtcctgcgcaattcgggacggcgaggagaaagcgtcggcg
ctgaaggagcagctgaaggcgtggcagaggctgaggcacgacctggagagagccaggctg
ctggtggagctcatccgcaagagggagaaactcaagagggagacgatcaaagtgcagcag
atggcgctggagatgcagctgacgccgttcctggtgctgctgaggagcacgctggagcag
ctgcaggagagggacatcaacaactttttcaccgagccggtcccgctggcagaggtgccg
gactacctcgaccacatcgacacgccgatggacttccagaccatgtggaacctgctggag
tcccaccgctacctcacgttcgaggccttcgagtccgacttcggcctcatcgtcaacaac
tgcctcaagtacaacgccaaggacaccgtcttctaccgcgctgccctgcggctcagggag
atgggcggggccgtcatgcggaccgccaggcgccacgccgagcgcatcggcttcgactac
gaggccggcctgcacctcccacgggagcccagcccagacggtcagcgggaccaggagagg
gagagggagcgggagcgggaccgagaatgggagcgagaacgggagagagagagggagcgg
gacagagagcgagaccgagaccacccgctgtcctctaacgaagatgcagacctgctcctg
ccagagaacaggcggcgcctcccggtggaggagcagctgcactacctgcaggcgcgcctg
gacgaggtcagcttggggaagcacagcatcggccagtcgcgcagagccaaggccctgagg
aaggagatcagcatcatcaagaggaagctggcgcaccagcgggagggaggcgccggcatc
gggggccgggaggctgcggggggaggggaccggggttcctccctcccccatcacccgtcc
tcctcggggcaccacgacgaagggggagaaagcagcagccaggagatcggtgggaaagat
atgagtgtgtcctcctccgccctggctccagaggtgggccgtcgcacatccgtcctcttc
tccaagaagaaccaaaagatggccggaccccccaaaaggccagggcggccccccaagaac
cgggacgccgtgtacgccgctgcggggttgggccaaagccccatcggcccccctcagctg
cccctgctgtcaccgagcaggcagaggaagaggccccgcagcccccgcaccagctccagc
tcggacagcgacagcgacgacgacgacctgctgccgggtctgccgagtaacgggttcgat
ggaggaaaccagccggtgactgagagcttccttgtgtacaggagcgagtcccgcctcccg
cgctccagctccgactccgagtcgacgaccagcagcagcagcagcgcggcgtcggaccgg
accagtacgaccccctccaagcagggccgggggaaggcctcgttctcccgctccgccttc
ccagaggacagcagcgaggagacgtcgggcacggagaacgattcctactcagtggggggg
ccgcgcagcgtctcgcactctctggatctggtgtgggccaagtgcagaggctatccctcc
tatcccgctctgataatcgacccgaagatgcccagggaaggggtgttccaccggggcgtc
ccgatacccgtcccgcctttggacgtgctgaaactaggggagcagatgacgcaggaggcc
agagagcacctgttcctggtcctcttcttcgacaacaaaagaacatggcagtggctgccg
cgctccaagctggtgccgctcggtgtggaccaggagctggacaaggagaagatgctggag
ggccgcaagtccaacatccgcaagtcggtgcaggtggcgtaccaccgggccatgcagcac
cgcagcaaggtgcagggagacccgagcagcgagaccagcgacagcgactga
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