| Entry |
|
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| Symbol |
ogg1
|
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| Name |
(RefSeq) N-glycosylase/DNA lyase
|
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| KO |
|
|---|
| Organism |
ppug Pungitius pungitius (ninespine stickleback)
|
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| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:ppug00001]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
119222012 (ogg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:ppug03400]
119222012 (ogg1)
Enzymes [BR:ppug01000]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
119222012 (ogg1)
DNA repair and recombination proteins [BR:ppug03400]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
119222012 (ogg1)
|
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| SSDB |
|
|---|
| Motif |
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| Other DBs |
|
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| LinkDB |
|
|---|
| Position |
1:15579458..15583851
|
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| AA seq |
398 aa
MAEHALLSSGGNGWRSLACAKSELRLDLTLACGQSFRWRETAAGHWTGVMGGRVWTLTQT
DEALWYHVYRSSGGGAGQVRCRKRSEGVPLHTGGLSGKGFAGAVKKEEEEPVAVTEGDTD
EEGQMLRDYFQLSVSLGDLYQQWAAADPHFEHIAGFFPGVRMLRQDPTECLFSLICTTNN
NIPRIHNMVDSLCQALGAPLVQLDGTSYHDFPSLSELADGGVEARLRDLRFGYRARFLQQ
SAQILAKKEPRWLEGLRTTAYPLAHDALRELPGVGPKVANCVCLMSLDKAEAVPVDTHVR
QIAERDYGYAAGKARKTITDRQQWELGDFFRKLWGPRAGWAQSVLFCADLKRFQALKEAD
LKRPKKEEDDEMEVSVAHEGTKTEEEGSGNAKKGKTSV |
|---|
| NT seq |
1197 nt +upstreamnt +downstreamnt
atggccgagcatgcgctgctgtcatcggggggaaacgggtggagatccctggcctgtgcc
aagtccgagctgcggctggatctcactctcgcctgcggacaatccttccgctggagggaa
accgctgcgggccactggaccggagtgatggggggacgagtgtggactctgacccagacg
gacgaggctctctggtaccacgtttacaggagctcgggcggaggagcaggacaggtgagg
tgccggaagaggagcgaaggtgttcccctccatacgggagggttgtcagggaagggattc
gcaggagctgtgaagaaggaggaggaggagccggtggctgtgaccgagggggacaccgat
gaggaaggacagatgctgagggactacttccagctgagtgtcagtctcggggatctgtac
cagcagtgggcagcagcagacccccacttcgagcacatcgcaggcttcttcccaggcgtg
cgaatgcttcgccaggaccccaccgagtgtcttttctccctcatctgcaccaccaacaac
aacatcccgcggatccacaacatggtggacagtttgtgtcaggctctgggcgccccgctc
gtccaactggacggaacctcgtaccacgacttcccctccctgtctgagctcgccgacggc
ggcgtggaggcccgtctcagagatctgcgtttcggatacagggctcggttccttcagcag
agcgcgcagatcttggccaaaaaagagccccggtggctcgagggcctccgaaccaccgcg
tacccgctggctcacgacgccctgcgcgaactgcccggcgtgggccccaaggtggcgaac
tgcgtgtgcctgatgtccctggacaaggccgaggccgtgcccgtggacacgcacgtgcgg
cagatcgccgaacgggactacggatacgcggccggcaaagcacggaagaccatcaccgac
agacagcagtgggagctcggggatttcttcaggaagctgtggggtcctcgcgccgggtgg
gcgcagtcggtgctgttctgtgccgacctcaagaggttccaagcgctgaaggaagcggac
ctgaagcggccgaagaaagaggaggatgacgagatggaggtgtcggtcgctcacgagggc
acgaagaccgaggaggaaggaagtgggaacgcgaagaaagggaagacgtctgtctga |
|---|
