Pungitius pungitius (ninespine stickleback): 119222125
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Entry
119222125 CDS
T07626
Symbol
xpc
Name
(RefSeq) DNA repair protein complementing XP-C cells
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
119222125 (xpc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119222125 (xpc)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
119222125 (xpc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Motif
Other DBs
NCBI-GeneID:
119222125
NCBI-ProteinID:
XP_037334393
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All DBs
Position
1:25686257..25695164
Genome browser
AA seq
927 aa
AA seq
DB search
MAKRRGSAETEVDTKKPKQVPKAKSSATKARAKTKSAGNVIPEDDEVLKRKVKPKPRAST
KRVSGKTSSTSSPTATAVKTSKYFSSPVKEEQDASEDDSHAVTSAAPPVQGNAKETKREE
KEQQEESEEDDDDDWEEVEELSGPLGPVEPPEPVLPSQPVQIEIETAEVRKKKKRQAEFE
TYMRRMVNRLKKDVLIDTHKVHLMCLIANAMFRGRLCSEPDLLAITLSLLPTHFSMVAKE
RIDHNYLSGLLKWFSSTFSLNPSLSCEESLNPRTLLERRLASLSARTHQEMTHLFLLVLR
SLQLFCRLVISLQPIPLKTPSAKGKGARTPTSAPGASNASQQTSRTTSPDQKVSPGTKRP
AGGGAVRGGHGGKKAKTIEIKEEHDEIKEKTKASGGQRPKNSKRRSIASKVSYKEESESE
GEKEEGLSEDDDFQVTSEEDSEDSERGAESTKSRKEKGGSKANAANSKRRSGGGKEPIKD
EQRKEGEADEEEGTTGNRTKRRSGRKNDGPRADEWLEVYLVKTSSWVCVDTEQGVGMPHL
CSQNATAPITYVVSVDGDGFVKDLGKKYDPTWLTSSRKRRVDEEWWEETLQPFLGPEDER
DVKEEKELQNKLLNKPLPVSIAEYKNHPLYALKRHLLKYEAIYPSTATSLGYCRGEPVYS
RDCVHTLHSKDTWLKEARTVRLGEEPYKMVKGFSNRSRKARMASEQKEDNDLSLFGEWQT
EEYQPPLAMDGKVPRNDYGNVYLFKPCMIPVGCVHLKLPNLHRVARKLNMDAAPAVTGFD
FHGGYSHAVNDGYIVCEEHEEILRAAWVEDQEIQKQKEREKKEKRVISNWTLLVKGLLIR
ERLQQRYGKKNQGLGNLQETCGLSSDEEVAEAGSPSATTASETLAMSWPQNRQAEEDGGS
ISGLKKKKTTKREKRGQEKHMFPFEKV
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcggagggggagtgcagagactgaggtcgatacaaagaaaccgaagcaggtg
ccgaaggcaaagagcagcgcaacaaaagcgagagcgaagacgaaaagtgcaggtaatgtc
atcccagaggacgatgaggtgctgaagaggaaggtcaaacccaaaccacgggcctccacc
aagcgagtgtcggggaaaacctcttccacctcctctccaaccgcaacggctgtcaaaacg
agtaaatacttctcgtcgccagtgaaggaggagcaagatgccagtgaggatgactcgcac
gcggtgacctcggcagcccctccggttcaagggaacgccaaagaaaccaagagagaagaa
aaagagcagcaggaggagagcgaggaagacgacgatgacgattgggaggaagtggaagag
ctttctgggccgctgggtccagtcgaaccaccggaacccgtcctgccgtcccagccggtt
cagatagagatcgagactgcagaagtcagaaaaaagaaaaagaggcaggcagagtttgag
acttatatgagacggatggtgaaccgactcaagaaggacgtgctgatagacacacacaag
gtccacctgatgtgcctgatagccaatgcgatgttccgcggccgtctgtgcagtgaaccg
gacttgctcgccatcactctgtcgctgctgcccacccacttcagcatggtcgccaaggaa
cgcatcgaccacaactacctctctgggctgctcaaatggttttcatcaacgttctccctg
aaccccagtctttcctgtgaggagagtctgaacccccgcactctgctggagaggcggctc
gccagcctctctgccaggacccaccaggagatgactcatctgtttcttttggtcctgagg
tctctgcagctcttctgccgactggttatttctttgcagccgattcctctcaaaacccca
tctgccaagggaaaaggtgctcggacacctaccagcgctccgggagcgagcaacgcaagc
cagcaaacctccaggaccacctcccctgaccagaaggtctctcctggcaccaagagaccg
gctggagggggggcggtcagaggaggccatggaggaaagaaagctaagacgatagaaata
aaggaggagcatgacgagataaaggaaaagactaaagcatctggagggcagaggccaaag
aactccaaacgccgcagtatcgcctctaaagtcagctacaaggaagaaagcgagagcgaa
ggggaaaaggaggaggggcttagcgaagacgacgactttcaggtgaccagcgaggaagac
agtgaggattcagagagaggggctgaatcaacaaagtcgaggaaagagaaaggagggagc
aaagccaacgcggcaaacagcaagagaagaagtggtggagggaaagaaccgatcaaagac
gagcagcgaaaagagggggaagctgatgaagaagagggaaccacaggcaacagaacaaag
cgaaggagtgggagaaagaacgacgggcccagagcggacgagtggctggaggtgtacctg
gtgaagacgtcatcctgggtttgcgtcgacacggagcagggcgtcgggatgcctcacctc
tgctcccagaatgcaacggcgccgattacctacgtggtgtcggtggacggagacggcttt
gtgaaggacttgggaaagaagtacgaccccacctggctgacctcttccaggaagaggcgc
gtggacgaagagtggtgggaggagacgcttcagccgttccttggacccgaggacgagagg
gacgtgaaggaggaaaaggagctccagaacaaactgctgaacaaacccctgcccgtctca
atagcggagtataagaaccacccgctgtacgccttaaagagacacctgctgaaatatgaa
gccatctacccatcaactgccacttcactgggatactgcaggggagagccggtgtactcc
agggattgtgtgcacacgctccactccaaagacacttggttgaaagaggcacggactgtc
agactaggagaggaaccatacaagatggtgaagggcttctctaatcggtcccgcaaagcc
aggatggcatctgagcagaaggaggacaatgacctgtctctgtttggagagtggcagact
gaagagtaccagccgcctttagctatggacgggaaggttccccgtaacgactacggcaac
gtctacctgtttaagccctgcatgataccggtgggctgcgttcacctcaagctgcccaac
ctgcaccgcgtggccaggaagctgaacatggacgcagcccccgcggtcactggcttcgac
ttccatggaggatactcgcatgctgtgaatgacggctacattgtgtgtgaggagcatgag
gagattctcagagcggcctgggtggaagatcaagagattcagaaacagaaggagagagag
aaaaaagagaagagggtgatttccaactggactttgctggtgaaggggctcctgatcaga
gaaagacttcaacagcgctacggaaagaagaaccagggtctggggaacctccaggagact
tgcgggctttcgtcagatgaagaggtggctgaggccggaagtccttccgctacgacggcg
tctgagactctggccatgtcctggcctcagaacagacaagcagaggaggacggagggagc
atcagcggactgaagaagaagaagacgacaaagcgagaaaagaggggacaggagaaacac
atgttcccctttgagaaagtgtga
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