Pungitius pungitius (ninespine stickleback): 119222195
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Entry
119222195 CDS
T07626
Symbol
samhd1
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03250
Viral life cycle - HIV-1
ppug04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
119222195 (samhd1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
119222195 (samhd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119222195 (samhd1)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
119222195 (samhd1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
SAM_1
SAM_2
HD_assoc_2
PDEase_I
Motif
Other DBs
NCBI-GeneID:
119222195
NCBI-ProteinID:
XP_037334500
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Position
1:14161239..14173298
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AA seq
601 aa
AA seq
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MASRKRSFPPDSSLSTPGKRAPGPGASETDYARWGAEETCLYLRAEGLGEWEEAFREQRI
TGVGLRCLADADLEKMGLKLLGDRLRVLHSLRKLWQMEAGPSKVFNDPIHGHMEMHPLLV
RIIDTPQFQRLRHIKQLGGAYFVFPGASHNRFEHSLGVGHLAGELVRALHQRQPELQITP
RDILCVQIAGLCHDLGHGPFSHMFDGKFIPKARPGHTWKHEEASVDMFDHLVKVNDLEPV
MREHGLVLPEDLDFIKEQIAGPLDPKESKWPYKGRPEDKSFLYEIVSNKRNGIDVDKWDY
FARDCYHLGIKNNFDYSRCLMFARVCEVDGQKHICTRDKEVGNLYDMFHTRNCLHRRAYQ
HKVANIVETMITEAFLKADGHILFEGSDGKMFSLSEAIDDMEAYTKVTDNVFEQILNSSS
AELKNSREILKNIVCRRLYKCLGHTQADQHENVPQERIASWEAALARCVSQDVVLDSEDF
IIDVINLDYGMKEKNPINSVRFYSKDDPSKAVQIRKNQVSKLLPEQFAEQLIRVYCKKND
SKSLEAAKKNFVQWCMDENFSKPQDGDIIAPELTPLKPSWQDDNDKEKITFGKARIQLFK
R
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccgaaagcgatcgtttccccccgacagcagcctcagcactccggggaagaga
gccccggggcccggtgcgtcagagacggactacgcgcgatggggagcggaagaaacgtgt
ctgtacctgcgggcagaaggtcttggagagtgggaagaggcattcagagagcagagaatc
accggggtagggctgcgctgcctggcggatgctgatttggagaagatgggcttgaagctc
cttggggaccgcctgcgagttctacacagcctcaggaagctgtggcagatggaggcaggg
ccgagcaaggtgttcaacgatcccatccacggccacatggagatgcaccctctgctcgtc
agaatcatcgacacgcctcagttccagaggctccgtcacatcaagcagctcgggggggcc
tactttgttttccccggagcgtcccacaaccgcttcgagcactccctaggggtggggcat
ctggctggagaactggtccgagctctgcatcagaggcagccggagctccaaataaccccc
agagacatcctctgcgtgcagatcgccgggctctgccacgacctcggacacgggcctttc
tcccacatgtttgatggaaagttcatccccaaagcacgtccaggtcacacctggaagcat
gaggaggcctccgtggacatgtttgaccacctggtaaaggtcaacgatctggagccggtg
atgagggagcacggcctggtgctgcccgaggacctggacttcatcaaggaacagattgcc
gggccactggacccaaaggagtcgaagtggccctataaaggccgtccagaggacaagtcc
ttcctctatgagattgtgtccaacaaaagaaacggcatcgatgtggacaagtgggactac
tttgccagggactgctaccatctgggcatcaagaacaactttgactatagccgctgcctg
atgttcgccagagtgtgtgaggtagacgggcagaagcacatctgcaccagagacaaggaa
gtgggaaatctgtatgacatgttccacacaaggaactgtctccaccggagagcctaccag
cacaaagtggccaacattgtggagactatgatcactgaggcctttttgaaagcagacgga
cacatcctgttcgaaggctctgatggaaagatgttctctctctctgaggccatcgacgac
atggaggcctacaccaaggtgacagataacgtctttgaacaaatactcaactcgtcctcc
gcggagctgaagaactcgagggagattcttaaaaacattgtgtgtcgacgcctctacaaa
tgtctcggccacacccaggcggaccaacacgagaacgtcccccaggagaggattgcgagc
tgggaagccgctctggctcgatgcgtctctcaggacgtggttctggattcagaggacttc
atcatcgatgtcatcaacttggactatgggatgaaggagaagaaccccattaacagcgtg
cgcttttacagcaaggacgacccgagcaaagccgtccagatccgcaagaaccaggtgtct
aaacttctcccagagcagtttgctgagcagctgatccgggtctactgcaagaagaatgac
agcaagagtctggaggcggcaaagaagaactttgttcagtggtgcatggacgagaacttc
tcaaagcctcaggacggagacataatagcccccgagctgactcctctgaagcccagctgg
caggacgacaacgacaaggaaaaaataacatttggtaaagccagaattcagctctttaaa
agataa
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