Pungitius pungitius (ninespine stickleback): 119222244
Help
Entry
119222244 CDS
T07626
Name
(RefSeq) dynactin subunit 1-like isoform X1
KO
K04648
dynactin 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04814
Motor proteins
ppug05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
119222244
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
119222244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119222244
03036 Chromosome and associated proteins [BR:
ppug03036
]
119222244
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119222244
Membrane trafficking [BR:
ppug04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
119222244
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
119222244
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
119222244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
CCDC93_CC
Gemin7
Motif
Other DBs
NCBI-GeneID:
119222244
NCBI-ProteinID:
XP_037334619
LinkDB
All DBs
Position
1:complement(9091391..9103016)
Genome browser
AA seq
1258 aa
AA seq
DB search
MSSAGTVEATRPPKIGSIVEVTGKGQRGTVAYIGATLFASGKWVGVILDDAKGKNDGTVQ
GKRYFTCEENHGIFVRQSQLQVVEDATSPDTPESGTTKIARQKDIPETPRTSKQTPVNVK
KWGTPSRLTPATSLPSLLMRPTGRSSLMASRESLASSLSGDVSEAGHQGALGAPVTPQPS
GSPAAMAAPAPATPSKVEPAGSKQEEESMRAQVKDLEEKLETLKMKRTEDKAKLKELEKH
KIQLEQLQEWKTKMQEQQAELQKQLKEAKKEAREAHESKDHYMEEMADTADAIEMATLDK
EMAEERAESLQVEVDSLKEKVEELSMDLEILRHEISEKGSDGAASSYHVKQLEEQNGRLK
EALVRMRDLSTSEKQEHVKLQKQMEKKNTELETLRTQKEKLQEEVKQADATIDELKEQVD
AALGSEEMVESLTERNLDLEEKVRELRETVTDLEAINEMNDELQENGRETEMELREQVDL
SGAKVREAEKRVEAAQETVADYQQTINKYRDLTASLQEANRELISQQNMNAEVQQPPAEL
FDFKIKFAETKAYAKAIEMELRKMEVAQSNRQVSLLTSFMPDSFLRHGGDHDCILVLLLI
PRLICKAELISKQAQEKFDLNGNLAQVTGLRGPAGEQRSFASGLVYSLSLLQATLHKYEQ
ALNTCSVEVFKRMGTLYSEMNFHERSLDYFIDLLHKDQLDETVQVEPLTKAIKYYQQLYS
VHLADHTEDCTVQLADHIKFTQSVLDCMGVEVSRLRAFMAAGQETSGFGVLLKDLDTSCS
DIKQFCKKIRRRMPGMDVAGVPAALNFGPQVSELLTECRRQQTRVVAVLQEVAAAGAQMI
APLAEQEGLNALKLEDIACKVVEQVYGSQGLNGPECLRQSCSSIIITMNKMATAMQEGEY
DADKPQAKTHPVEIRASTVRAEMTDAEGLGVKLEDRETASKELKKALKIKGEELSEASVR
LSLLEKKLDTSTKDADERVEKIQTKLDENLALLKKKEKEFEETMDALQADIDQLEAEKGE
LKQRINNQSKMTIEGLRAPPASGIASIVQGSAGGVPQSLTGPLQVVDSPLLMQQVEAQRL
GIKHLKNENNRLKSEKMRAQLASLPPLCPPKLPKAPQESSMQPDGLNTGIYRRTDQLLAT
LLKLSSEVKVVDITGKTAVSAGAQLLEQTARLQYLSDALDKLKGEVAEHVVSSQSGAKAS
SDFATFPVSCFVKAKEEKQGGTVFVGRVAIPCTRGQEQVHRLVLSQQQLQKVHRLLMV
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgcaggaacagtggaggcgaccagacctcccaaaattggctctatagtggag
gtgacggggaagggtcagcgtggtactgttgcctacattggggccaccctctttgcctct
ggaaaatgggtgggcgtcatactggacgatgccaaaggcaagaacgatggcaccgtgcag
gggaagcgctacttcacctgtgaggaaaatcacgggatatttgtcagacagtcccagctc
caggtggtggaagacgccacctcaccggatactcctgagtcaggtactacaaagattgcc
agacagaaagatattcctgaaactcccagaacatccaagcagacacctgtgaacgttaag
aagtggggcactccaagtcgtctcacacctgccacctccctcccctccctcttgatgcgt
cccaccggccgctccagcctcatggcctctcgtgagagcctggcgtcctctctgtctggc
gatgtcagtgaagcaggtcaccagggtgcactgggggctcctgtcacgcctcagcccagc
gggtcgccagcagcaatggcagccccggcgccggctactccaagcaaggtggaacctgcc
ggttccaagcaggaggaggaatctatgcgagctcaggtcaaagacctggaggagaagctg
gaaacactgaagatgaagcggacagaggacaaagccaagctgaaagaactcgagaaacac
aagatccagctggagcagcttcaagagtggaagaccaaaatgcaggagcagcaggcggag
ctacagaaacagctcaaagaggccaagaaggaagcccgtgaggcacacgagtccaaggac
cactacatggaggagatggcggacacggcagacgccatagagatggccacactggacaaa
gagatggccgaagagcgggcagagtcactgcaagtggaggtggactcgctgaaagagaaa
gtggaggagctctcaatggacctggagatactgagacatgagatttcagagaaaggctca
gatggagctgcctccagttaccatgtcaaacagctggaggagcagaatggcagactgaag
gaggccttggttcggatgcgtgacctgtctacttcagagaagcaggagcatgtgaagctg
cagaaacagatggagaagaagaacactgagcttgagactctgaggactcagaaggagaaa
ctgcaggaggaggtcaagcaggcagacgctactattgatgaactcaaggagcaggtggat
gctgctttggggtcagaggagatggtggagagcttgacagagaggaaccttgacctggag
gagaaagtcagagagctgagagaaaccgtcaccgatttggaggccatcaacgagatgaac
gatgagctccaggagaatggccgggaaacggaaatggagctgagggagcaggtggatctg
agtggagcaaaggtcagagaggctgaaaaaagggtggaggctgcccaggagactgtagct
gattaccagcagaccatcaacaaatacagagatctcaccgccagcctacaggaggccaac
agagagctgatcagtcagcagaatatgaatgctgaagttcagcaaccgcctgctgaactg
tttgacttcaagatcaagtttgcagagaccaaggcctacgccaaggccattgagatggag
ctgaggaaaatggaagtggcccagtcaaaccgacaggtgtctctcctcacctccttcatg
ccggactccttcctccgtcatggtggagatcacgactgcattctggtccttctgctcatc
cccaggctcatctgcaaggctgagctgatcagtaaacaggcccaagagaagtttgacctg
aatgggaacttggcccaggtaacgggcctacgaggacctgcaggagagcagcgcagtttt
gcctcaggactggtctactccctcagcctcctgcaggccactctgcacaaatatgaacag
gctctgaatacctgcagcgtggaggttttcaagcgcatgggtacactctactctgaaatg
aactttcatgagcgctctctggattatttcattgacctgctgcataaggatcagctagat
gagacggttcaggtggagcctctgactaaggccatcaagtattatcagcaactatacagc
gtacatctggcagatcacactgaagactgcacagtgcagctggctgaccacatcaagttc
acccagagtgtgctggactgcatgggggtggaggtctctcgtctgcgggcctttatggcg
gcaggtcaggagacctctggcttcggcgtccttctgaaggacctggacacctcctgctct
gacatcaaacagttctgtaagaagatccgccgtcgcatgcctggaatggatgtagctgga
gtacccgctgctctcaattttggaccacaggtgtcagagttgctgacggagtgcaggcgc
cagcagacccgcgtggtggctgtgctgcaggaagtggctgcagctggagctcagatgatc
gctcctctggcagagcaagaggggctcaacgctctcaaactggaggatattgcctgcaag
gttgtggagcaggtgtatggttctcaaggcctgaacggcccagaatgtctgcggcagtcc
tgcagctccatcatcattactatgaacaagatggccacagccatgcaggaaggagagtac
gatgctgacaaaccccaggccaagactcatccagtggagataagagcgtccaccgtcagg
gcggagatgactgatgctgagggtctgggagttaaactagaagatagagagaccgccagc
aaggagctaaagaaggccctgaagatcaagggtgaggagctaagtgaggccagcgtccgt
ctgagcctgctggagaagaagctggacacctccaccaaggacgcagatgagcgggtggag
aagattcagaccaaactggacgagaacctcgccctgctaaagaagaaagagaaggagttt
gaggaaacaatggatgccctgcaagctgatattgaccagctggaggcggagaagggagag
ctgaaacaacgcattaataaccaatcaaagatgacaatcgaaggcctgagagccccgcct
gcctctggaatcgcctccattgttcaaggatctgcaggaggtgtgcctcagtccctgact
ggaccgttgcaggttgtggactctcctcttctgatgcagcaggttgaagcacagaggcta
ggaattaaacaccttaagaatgaaaacaacagactcaagtcggagaagatgagagcccag
ctggcttctttgcctccactctgccctcccaaactaccaaaagcaccccaagaaagttcc
atgcaaccagatggactaaacacaggcatctatcgaaggaccgaccaactgctggctacc
ctgctcaagctgagttcagaggttaaagtggtggacattacaggaaagacagcagtcagt
gccggtgcccagctgctggagcagacggctcgactgcagtacctcagcgatgctctggac
aaactcaagggagaagttgctgaacatgtggtctcaagtcagtctggggcaaaggcttcc
tcggactttgccacctttccagtgtcctgttttgtcaaggctaaggaggagaagcaggga
gggacggtgttcgtaggacgtgttgccattccgtgtacccgtggacaagaacaagttcac
cgcctcgtcctatcacagcagcagctgcagaaagtgcaccgactcctcatggtctaa
DBGET
integrated database retrieval system
