Pungitius pungitius (ninespine stickleback): 119222274
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Entry
119222274 CDS
T07626
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119222274 (rbm39b)
Spliceosome [BR:
ppug03041
]
Common components
Common spliceosomal components
General mRNP proteins
119222274 (rbm39b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
119222274
NCBI-ProteinID:
XP_037334667
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All DBs
Position
1:complement(15319670..15325757)
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AA seq
538 aa
AA seq
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MADDFDVEAMLEAPFRKDEIKSSHANGHNEQNKKKRRSRSKSRSPGSRKRRSRSKDKKKS
KKRSKSRERKRSRSRERHRSGSRSKERSGRYRARKSPIRKRSKSRSPFKKEKSPIRNFED
AIGPFNKVREQPIDNLTPEERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRMISDRN
SRRSKGIAYIEFVESSSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAANNLQKGSSGP
MRLYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALE
QLNGFELAGRPMKVGHVTERSDSSTASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGL
KIPPAAQQALQMTGSIPFGNISAPPCELPDDHRTLGACVSVCYFIVFLFVSALPTPSQSQ
AMNLPSQPLATHCLQLSNLFNPQAENDLTWAVEIQDDVIEECNKHGGIVHIYVDKNSAQG
NVYVKCPSIPAAMATVNALHGRWFAGKMITAAYVPLPTYHNLFPDSVTAKQLLMPARR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgattttgacgttgaggccatgctggaggctccattcagaaaggatgagatc
aagtcctctcatgcaaatggacacaatgagcaaaataagaaaaaaaggaggagtcgaagc
aaaagccgaagccctggttctaggaagcgaaggagccgaagcaaagacaaaaagaagagc
aagaagaggagcaagagccgagaaagaaagcgaagccgcagcagagagcgccatcgcagc
ggctcccgcagcaaggagcgctcgggccgctacagagcacgcaagagccccatccggaaa
cgttcaaaaagtaggagcccctttaaaaaagagaagagtcccatcagaaactttgaagat
gctatcgggccgtttaacaaagtcagggagcaaccgattgacaacctcacgccggaggag
agggatgctcgcacagttttctgcatgcagctcgctgcacgaatccgagccagagacctg
gaggacttcttctccgccgtgggaaaagtcagagatgtcagaatgatctcggacagaaac
tccaggaggtcaaagggcatcgcgtacatagagttcgtggagtcgtcctccgtgccgctg
gccatcggtctgaccggacagaggctgctcggagttcccatcatcgtccaggcctcgcag
gcggagaaaaatagagcggcagcggctgccaacaatctgcagaagggcagctcgggccca
atgcggctctacgtgggctcgctgcacttcaacatcacggaagaaatgctccgagggatc
ttcgagccttttgggaagatcgagggcatccagctgatgatggacagcgaaacgggccgg
tccaaaggatacggcttcatatcgtttgcagacgccgaatgcgccaagaaggccctggag
cagctgaacggctttgagctggcgggccggcccatgaaggtgggtcacgtgacagagcgc
tcggactcctccacggcctcctccttcctggacaacgacgagctggagcggaccggcatc
gacctcggcaccacaggccgcctgcagctcatggcccggctagcggaaggaaccggcctg
aagatcccccccgctgctcagcaggctctgcagatgaccggctccattcccttcgggaac
atttctgctccaccatgtgagttgccagatgaccaccggacgctcggcgcgtgtgtgtct
gtgtgttatttcattgtttttctttttgtttcagctctcccgactccgtctcagagccaa
gcgatgaacctcccgtcccagccgctggccacacactgcctgcagctctccaacctcttc
aacccacaagcggagaacgatctgacctgggctgtggagatccaggacgacgtgatcgag
gagtgcaacaaacacggaggaatcgttcacatttatgtcgacaagaactctgctcaaggc
aacgtgtacgtgaagtgtccctcgataccagcggcgatggcgactgtgaacgctcttcac
ggacgctggtttgcaggtaaaatgataacggcggcttacgtcccgctcccgacgtaccac
aaccttttccccgactcggtgacggcgaagcagctcctgatgccggcgcgccgatag
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