Pungitius pungitius (ninespine stickleback): 119222292
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Entry
119222292 CDS
T07626
Name
(RefSeq) alpha-actinin-4 isoform X1
KO
K05699
actinin alpha 1/4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04510
Focal adhesion
ppug04517
IgSF CAM signaling
ppug04518
Integrin signaling
ppug04519
Cadherin signaling
ppug04520
Adherens junction
ppug04530
Tight junction
ppug04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
119222292
04518 Integrin signaling
119222292
04519 Cadherin signaling
119222292
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
119222292
04520 Adherens junction
119222292
04530 Tight junction
119222292
09142 Cell motility
04810 Regulation of actin cytoskeleton
119222292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119222292
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ppug04812
]
119222292
04147 Exosome [BR:
ppug04147
]
119222292
Membrane trafficking [BR:
ppug04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
119222292
Cytoskeleton proteins [BR:
ppug04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
119222292
Exosome [BR:
ppug04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
119222292
Exosomal proteins of colorectal cancer cells
119222292
Exosomal proteins of bladder cancer cells
119222292
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CH
Spectrin
EFhand_Ca_insen
EF-hand_1
EF-hand_8
EF-hand_6
EF-hand_7
EF-hand_5
XisI
CAMSAP_CH
Motif
Other DBs
NCBI-GeneID:
119222292
NCBI-ProteinID:
XP_037334708
LinkDB
All DBs
Position
3:complement(17023078..17061336)
Genome browser
AA seq
917 aa
AA seq
DB search
MVDYHASNNQSSTGHMEQENDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKSGTQIENIEE
DFRDGLKLMLLLEVIAGERLPKPERGKMRVHKINNVNKALDFIASKGVKLVSIGAEEIVD
GNAKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNVQNFHMSWKDGL
AFNALIHRHRPDLIDYDSLRKDDPVTNLNNAFEVAEKHLDIPKMLDAEDIVNTGRPDEKA
IMTYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQMMEDYEKLASELLEWIRRTIPWL
ENRTQEKTVNDMQAKQEDFRDYRCVHKPPKVQEKCQLEISFNTLQTKLRLSNRPAFMPSE
GRMVSDINGAWHTLEGAEKGYEEWILSEIRRLERLEHLAEKFHQKAAIHESWTDGKEAML
TQKDYETSTLSEVKALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSASVNARCQ
KICDQWDTLGAFTHGRKESLERTEKQLESIDELYLEYAKRAAPFNNWMEGAMEDLQDMFI
VHNIEEIQGLITAHEQFKSTLAEANKEREAIQAIQAEVQKIAQSNGIKLSGANPYTTITP
KSIDSKWEKAMDMVPLRDTALQGELNKQNSNDSLRAKFATQANTVGAYIKAKMEEIGRIS
IEMNGTLEDQLTSLKEYQKTIMSYMPEINTLEGYHQLIQEALIFDNQYTSYTMEHLRVGW
EQLLTTIARTINEVENQILTRDAKGISQEQLYEYRASFNHFDKDHSGALMAEEFKACLIS
LGYDVENDKQKRSGQMVSEDFRALLISTGNSLGESEFARIMSIVDPNGSGAVTFQAFIDF
MSRETTDTDTADQVIASFKILAADKTFITAEELRRELPPDQAEYCIARMAPYVGADAVPG
ALDYMSFSTALYGESDL
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggtagattatcacgcgtctaataaccaatcgtcgaccggacacatggagcaagagaac
gactgggaccgggaccttctgctggacccggcctgggagaagcagcagaggaagacgttc
acggcgtggtgcaactctcacctgaggaagtctggcacgcagattgagaacatcgaggag
gacttcagggatgggctaaaactcatgctgctgctggaggtcattgcaggcgaacggtta
cccaaacctgagcgaggcaagatgagggtgcacaagatcaacaacgttaacaaagccctg
gacttcatcgccagcaaaggagtcaagctggtctctattggagctgaggaaattgtagac
ggaaatgccaagatgaccctgggaatgatctggaccatcatcctccgcttcgccatccag
gacatctctgtagaggagacttctgcaaaggagggtcttctcctgtggtgccagaggaag
accgctccttacaagaatgttaacgtgcagaacttccacatgagctggaaggatggtctc
gccttcaacgctctgatccacagacacagaccagatctcattgattatgacagcctcaga
aaggacgacccagtgaccaatctgaacaacgcctttgaagtggccgagaagcacctggac
atccccaagatgttggacgcagaagacattgtgaacactggtcgtccggatgagaaagcc
ataatgacttatgtgtccagtttctaccatgccttctctggagcacagaaggccgagacc
gccgccaatcgcatctgcaaggtgctggctgttaaccaggagaacgagcagatgatggag
gactatgagaagctggccagcgagctgctggagtggatccgtcgcaccatcccctggctg
gagaaccgaacccaggagaagaccgtgaacgacatgcaggccaagcaggaagacttcaga
gactaccgctgtgtccacaaaccccccaaggtccaagagaagtgccagctggagatcagc
ttcaacactctgcaaaccaaactgagactcagcaacagacctgccttcatgccgtcagag
gggcgcatggtgtctgatatcaacggagcttggcacactctggagggagcggagaagggc
tacgaggagtggatcctcagcgagatccgccgtctggagagactggagcacctggctgag
aagtttcaccagaaggccgccatccacgaatcctggacagacggtaaggaggccatgctg
actcagaaagactacgagacctccaccctgtcagaggtcaaggcgttgctacggaaacac
gaggcctttgagagcgacctggcagcccaccaggaccgagtggagcagatcgcagccatt
gcacaggaactcaacgagctggactattacgactcagccagcgtcaacgctcgctgtcag
aagatctgcgaccagtgggacaccctgggggcctttacccatgggcgcaaggagtcattg
gagcggacagagaagcagctggagtcgatcgacgaactctacctggagtacgctaagaga
gcagcacccttcaacaactggatggagggagcgatggaggacctgcaggacatgttcatc
gtccacaatattgaggagatccagggcctcatcacagcccacgagcagttcaagtccacc
ctggccgaggcaaacaaggagcgtgaggccatccaggcaatccaggccgaggtgcagaag
attgcccaaagcaacggcatcaagctgagcggagccaacccctacaccaccatcacacct
aagagcattgacagcaagtgggaaaaagcgatggacatggtgccgctgcgagacactgcc
ctgcagggcgagctcaacaagcagaactccaacgactccctgagagccaagttcgctact
caggccaacacggtcggcgcctacattaaggccaaaatggaggaaatcggcaggatatcc
attgagatgaacggcaccctggaggaccagctgaccagccttaaggagtaccagaagacc
atcatgtcctacatgcccgagatcaacacgctggaggggtaccaccagctcatccaggag
gccctcatcttcgacaaccagtacacctcctacacgatggagcatcttcgcgtgggctgg
gagcagctgctgaccaccatcgccagaaccatcaacgaggtggaaaaccagatcctgact
cgcgacgccaaaggaatcagccaggagcagctctacgagtaccgcgcctccttcaaccac
tttgacaaggaccacagcggcgcgctgatggccgaggagttcaaggcctgcttgatcagt
cttggctacgacgtggagaacgacaagcagaagcgatcgggacagatggtctcagaggac
ttccgagctctactcatttcaaccggaaacagcctgggagagagcgagtttgcacgcatc
atgagcatagtggaccccaacggcagcggtgctgtgaccttccaggccttcattgacttt
atgtccagggaaacgactgacacagacactgcggaccaggtcatcgcctccttcaagatc
ctggctgctgataagactttcatcacggctgaggagctgaggagggagctcccccccgac
caggcagagtactgcatcgcccgcatggcgccttacgtgggggccgacgccgtccccggc
gccctggactacatgtccttctccaccgccctgtacggagagagcgacctgtag
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