Pungitius pungitius (ninespine stickleback): 119222294
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Entry
119222294 CDS
T07626
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug00310
Lysine degradation
ppug01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
119222294 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119222294 (prdm2a)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119222294 (prdm2a)
Enzymes [BR:
ppug01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
119222294 (prdm2a)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
119222294 (prdm2a)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
119222294 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-C2HE
zf-C2H2_6
zf-C2H2_8
zf-C2H2_jaz
Zn_Ribbon_YjdM
zf-C2H2_ZNF462_1st
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
119222294
NCBI-ProteinID:
XP_037334705
LinkDB
All DBs
Position
1:complement(27251360..27259239)
Genome browser
AA seq
1399 aa
AA seq
DB search
MEDSPHLYISEIGTSEDMDEGEKEEEEDEDEEEENEDDINQEETNMQPDMINALFPDIHK
HTNQDTERGRNSFPCQHCERQFTSKQGLEQHMHIHALENHEAHAYKSHQSNTSLVQSQHE
KTRPLDSGDSVEQFHSSSPATSNTFIVSPGDLSALPDRPGALEGHHACKYCEKVFTTQTK
KRRHERRIHEQHLQVTRVEQTQQAQEEHFQKMLPEPSQQDTKIGDSTEPAAVLENDVVCT
EHYMLDVSSNISENLSFYIDGKIVSTSRVSSCEASDIHSGSSSLVGLNALILHSGQISQV
LNSDSVANIDIPGQPQVRRRTATPPLLPQIKTELESEGAASSPSSSLVSSLIENLLPRNT
GATVVQKERTVFLSPKLKQLLEKQDGLKPTLALIADAQKPCSPVSLSVLAAGTGRFKRRT
GSPPSSPQQSPTSKDETADGGDCDAVSTGQIETQPVHQTAHVNDDPTQTPSEEPAVKPVL
TESWPPKAGGNSCNQQPLDLSNTVKRNEELTLAAAVLDLSFQKNTLGKSEVTLDLISQAV
LKAGNFDACMAETALIQNVSLGNPLVTDFTILTGPDVMTPMESMAEGLVYGLALPSGSLT
PSPASLTPVALQPASPCTIAFASPVSHTVLPTASSLITVLAPSNISNSPIQPMQLLAPDI
SPEPLVICTENAFNFSECDLATAFATTDSTDPAALSQSLDPTLNLRGNMFLCDPIALNQP
LVESNPMPEGSFTPTVSLNDSLISSYNISSNTVLIKCNIALEAPGGVVPAAVTLHENTAE
SLAPTQVVINQMAQQEIVSAPDPQTVGPAVLMSSIAESLDLSTTDASGVSERPTVGESSL
APELVVNAKPPSVKDEEVADGVVPVPEISSNTSTSLEQAPEDEFSDGAPSDAQEQNFTKN
FICNVCDRLFHSMKELGHHVGDHADEWPYKCEFCVLLFSKPSALLDHRSSLHGVGKTYVC
SACTKEFVYLCNLKQHQEELHPGQQCTYTEEEKGKLRPQNYNNSIKGNTEPSAPDAAEKP
EKRVKKEENEVDKVADELLATIKILASEGVKVKGPDVRLGINQHYPSFKPPPFSYHNRSP
AGSVPSATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPKRNP
IPLRHFAKTQNGVLSTTNTTNGLNASNRPNRSKPSQDSPVKVKFKVLKKRKKKLAQRVMP
QRNKSAPSSNKMSPARVDEPQEVFVCPHCSREFTMRRSRTKHMAVCPRKPKEGKKRKDGG
VSVTKENDGHQRRRVEEKRQALPRHKTRLQSAASSVPPKRPAILPVQAVFSSKRSKIIIK
ESAPPKPETPALNEPPVVRTFNPSMRQYTRVQHGVKGLPIKITIVKQQQAAPQKDALLPT
QSRGQVGSRAGSSEPSPTA
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggaggactctcctcacttgtacatctctgaaattggcaccagtgaagatatggatgaa
ggtgagaaggaggaggaggaggatgaggatgaggaggaggagaatgaagatgacattaat
caagaggaaactaacatgcagccagacatgattaacgcactgttccctgatattcacaaa
cacaccaaccaggatactgaaagaggcaggaactcttttccctgccagcactgtgagaga
caatttaccagcaaacaaggcttagaacaacacatgcacattcatgctttagagaaccac
gaggcacacgcatacaaaagccatcagagcaacacgtctctggttcagtcgcagcatgag
aagacaaggcctctggattcaggtgactcagtcgagcagtttcattcttcatcccctgct
acctctaatactttcattgtgtctcccggtgacctcagtgctctgccagacaggccggga
gcattagaagggcatcatgcttgcaagtactgtgaaaaggtgttcactacacagaccaaa
aagaggcgccatgagcgcaggatccacgagcagcacctgcaggtcacacgtgtggaacaa
acccagcaagcccaggaggaacattttcagaaaatgctccctgaaccttctcaacaggac
acaaagataggcgacagtaccgaacctgctgctgttctggagaacgacgtggtatgcaca
gaacattacatgttagatgtctctagcaacatctcagaaaatctcagcttctatatcgat
ggtaagatagtgtcaacgagcagagtcagtagctgtgaagcatccgacattcattctggt
tcttcatctctagttggactgaatgccctgattctacactcgggccaaatcagccaggtt
ttaaattcagattcagttgcaaacatagacatacctggtcaaccacaagttaggagaaga
actgcaacaccacctcttttacctcaaattaaaactgaactggagtctgaaggggcggcg
tcttctccgtcatcctcgcttgtgtcttctttaatagagaatctcctccctcggaataca
ggggccacggttgtgcagaaggaaagaactgtgttcctctctccgaagctgaagcagctc
ctagagaaacaggatggccttaaacctacacttgccctcatcgcggatgcccagaagcct
tgttcccccgtctccctttctgtcctggcggctggaacaggtaggtttaaaagaaggact
ggatctccaccgagctctccccagcaaagcccaacatctaaggacgaaacggcagatggt
ggagattgtgatgcagtgagtacagggcagatagagactcagcctgtgcaccaaacagcc
cacgtgaacgatgacccaactcaaacgccatcggaggagccagcagtgaagccggtcttg
acagagagttggccccccaaggccggcggtaattcctgtaaccagcaaccgctggatctc
tccaatacagtcaaaagaaacgaagagttaaccctagctgcggcagtgctggatttgagc
tttcaaaagaacaccctaggtaaatctgaagtgacattggatttaatttcacaggccgtt
ttgaaagcagggaatttcgatgcatgcatggcggagacggccttgatacaaaatgtaagc
ctagggaatcctttagttacagacttcacaatacttacaggtccagatgtgatgaccccg
atggagtccatggctgagggactcgtttacgggctcgcacttccatccggttctctgacc
ccatcacccgcatcccttacccctgttgccttgcaaccagcttcaccatgtaccatagca
tttgcttcccccgtctcacacactgtgctacctactgcttcctcattaataacagttttg
gcaccatcaaatatttcaaactctccaatccaaccaatgcagttacttgccccagatata
tctcccgagcctctggtcatctgcacggaaaatgcattcaatttttcagagtgtgattta
gcgactgcatttgctactacagattccacagaccctgcagctctctcccagtccctcgac
ccaactctaaatctacgtgggaacatgtttctctgtgatccaatagctctcaatcagcct
ttggttgagtccaatcctatgccggaagggtcattcacgccgacagtatctttaaatgat
tccctcattagttcttataacatcagcagcaacacggtgttgataaagtgcaacatagcc
ctcgaagccccggggggagtggtaccggctgcggttaccttacatgaaaacacagctgag
tctctagcaccgacgcaggtggtcatcaatcagatggcacagcaggagattgtatcggcg
cccgaccctcaaactgtgggccccgctgtcctgatgtcctccattgcagaatcacttgat
ctttccaccaccgacgcctcaggggtatctgaacgtcctactgtgggggaatcaagtctt
gcaccagagctggttgttaatgcgaagcccccgtccgtaaaagatgaggaagtggctgac
ggcgtggttcccgtccccgaaatctcatccaacacctcaacttctctggaacaagctccg
gaggacgagttctcagacggtgcgccgagcgacgctcaggagcagaatttcaccaagaat
ttcatctgcaatgtgtgcgataggcttttccattcaatgaaagaactgggccatcacgtg
ggagaccatgctgatgaatggccctacaaatgtgagttctgcgtgctgctcttcagcaaa
ccctccgctttgctcgatcatcgatcgagcctccacggtgtcggcaagacttatgtttgc
agtgcgtgcacaaaggaatttgtctatctctgtaatctgaaacagcatcaggaggaatta
catcccggccagcagtgtacctacacagaagaagaaaagggtaaactaagacctcagaac
tacaataactccataaaaggcaacacggagccatccgcgccggatgctgcggagaaaccc
gagaaacgggtgaaaaaggaggaaaatgaagtggacaaggttgcagacgaactgcttgca
actataaaaatcctggcctcagagggagtcaaagtcaaggggcccgatgtccgtcttggc
attaaccaacactatcccagctttaagccccctccgttttcttaccataacagatccccc
gctggctcggtgccttcggccacaaacttcaccacccacaacatcccacagacctttagc
acggctatccgatgcacaaagtgcgggaagagcttcgacaacatgccagagctacacaag
cacatcctggcttgtgcaaatgccagtgataaaaggagatacacgcccaaaagaaatccc
atccctctgcgccactttgcaaaaactcaaaatggagttttgtctaccactaataccacc
aacggactaaacgcttccaacagacccaaccggtccaaacccagccaagactcgccagtt
aaagtcaagttcaaggtgctgaagaagaggaagaagaaactggcccaaagggtcatgccg
cagaggaacaaatccgccccttcgtccaataagatgtcccccgcacgtgtggacgaaccg
caagaggtctttgtctgcccgcactgcagcagggagttcaccatgcgccgcagccgaacc
aaacacatggccgtctgccccaggaagcccaaagagggcaagaagaggaaggacggagga
gtctctgtgacaaaggaaaatgatggacaccagcgtaggagggtggaagagaagcgacaa
gccttgcctcgtcacaaaacaagattgcagagtgcggcaagttcggtgcctcctaaaaga
cccgccatcctgcccgtgcaggccgtcttttcaagcaaacgaagtaaaataatcataaag
gagagcgcaccaccgaaaccagagacgcccgcgctcaacgaaccccccgtggttcgcact
ttcaacccctcaatgcgccagtacaccagagtgcagcacggcgtcaaagggctccccatc
aaaatcaccatagtgaagcagcaacaggcggcgccacagaaggacgcgctgctccccacg
cagagccgagggcaggtcggcagcagagccggcagctctgagccaagtcccaccgcctga
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