Pungitius pungitius (ninespine stickleback): 119222296
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Entry
119222296 CDS
T07626
Symbol
aaas
Name
(RefSeq) aladin isoform X1
KO
K14320
aladin
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
119222296 (aaas)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ppug03019
]
119222296 (aaas)
Messenger RNA biogenesis [BR:
ppug03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
119222296 (aaas)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_Aladin
Beta-prop_IFT122_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_WDR3_1st
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_Prp19
WD40_CDC20-Fz
eIF2A
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
PD40
Beta-prop_WDR36-Utp21_2nd
DSE1_N
Beta-prop_WDR75_1st
BCAS3_WD40
PAC11
Motif
Other DBs
NCBI-GeneID:
119222296
NCBI-ProteinID:
XP_037334710
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All DBs
Position
1:17859957..17865985
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AA seq
520 aa
AA seq
DB search
MCSLALFPPPLPSGQTTLCESNNELLSGTASEQPQKQESSPPSLYFPRESLKLHSRTESS
SKAAFLDHSETLWMRSAAAWRDGGCTGLLDEITNSNTEVPKWLSVGSGFSLALLRWFSSF
HGSMFPHLTLSSEDMLAEFSQVLNWSDCVVRAFAWHPHTDKFALALLDDSIKIHNPKSAT
TPTLKHRLQRSVAAVQWKPLCASALAVACQNCLLVWHVDPCSLSTRPSSGCAQVLSHPGH
SPVTSIAWSPSGSLLLSASPMDTAMMVWDVASESCVPLQRVGGGGVTFLSWSPDGSHVLA
STPSALFRVWETRMWTCERWPCVKGRCQSGCWSPDGSRLLFAVQGEAVIYAMTFSDKPAG
VPTCTSTGPQAAAAVADLSETTFNTPEGDITVGGEIQSLSWDPTGERLAVLLKGDPQAAD
RPSIIAIFKTRTNPIFELLPCGFVQGELDAEPRLMQFHPNFQHGALLTVCWSNGRITHVP
FYFLSAGVPHFGLGGSPSLPRPQEGAADFANQSLFTELVS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgtgttctctggcgttgttccccccgccgctgccctcggggcagaccactctgtgcgag
tccaacaacgagctgctctccggaaccgcctcggaacagccacagaaacaggagtctagt
cctccgagtttgtatttcccccgagagtctctgaagctccacagtcgcacagaaagcagc
agcaaggcggccttcctggaccactcagagacgctgtggatgaggagtgcagccgcttgg
cgggatggtggttgcacggggttactcgatgaaattaccaactcaaatacagaagtgcct
aaatggctttcagtgggttcgggcttttcactggcgttgctccgatggttctcttccttt
cacggctccatgtttcctcatctcacattgagcagtgaggacatgcttgctgagttttca
caagtgctgaactggtctgactgtgtggtgcgagccttcgcctggcatccccatacggat
aaatttgctttagccctgctagacgactccattaagatccacaaccccaaaagtgccacc
acccccaccctgaagcaccgtctacagaggagtgtggcagcagtgcagtggaagccgctg
tgtgcgtccgccctcgctgtggcttgtcaaaactgtttactggtttggcacgtggacccc
tgctcgctctcaaccaggccctcgtccggttgtgctcaagttttgtctcatcctggtcac
tctccggtcacttccatcgcctggtccccgagcggatctctcctcttgtctgcctcgccc
atggacaccgccatgatggtctgggatgttgcttcagagagctgtgtgccacttcagcgt
gttggaggaggtggggtcactttcctttcttggtcccctgatggtagccatgtcctggcc
tctacaccttctgccctgttcagggtttgggagaccaggatgtggacctgtgagcgttgg
ccgtgtgtgaaagggcgctgccagtccggctgttggagtccagatggcagtcgacttctt
tttgccgtacagggagaggcggtcatctacgctatgaccttcagtgataaaccagcaggt
gtaccaacgtgcacatctacagggccgcaggcagcagcagcggtggccgacctatcagag
accacctttaacacaccggaaggagacatcactgtcggcggagagatccagtctttatcc
tgggacccaacgggagagaggctggcagtgcttctcaagggtgatccacaagcagcagac
aggccctcaatcatagccatattcaagacaagaaccaacccaatttttgagcttttacct
tgtggttttgttcaaggggagctggatgcggagccgagactaatgcagtttcacccgaac
ttccagcacggcgctctgctcactgtgtgttggtccaatggaagaattacccacgtgcct
ttctacttcctgagtgccggggtcccacattttggcctcggtggcagtccgtcgctgccg
cgtcctcaagaaggagccgcagacttcgccaatcagtcgctcttcaccgagctcgtctcg
tga
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