Pungitius pungitius (ninespine stickleback): 119222319
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Entry
119222319 CDS
T07626
Symbol
usp19
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19 isoform X2
KO
K11847
ubiquitin carboxyl-terminal hydrolase 19 [EC:
3.4.19.12
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119222319 (usp19)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119222319 (usp19)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119222319 (usp19)
Peptidases and inhibitors [BR:
ppug01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119222319 (usp19)
Ubiquitin system [BR:
ppug04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119222319 (usp19)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
USP19_linker
UCH_1
zf-MYND
CS
USP7_C2
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
119222319
NCBI-ProteinID:
XP_037334766
LinkDB
All DBs
Position
1:complement(22205329..22225210)
Genome browser
AA seq
1511 aa
AA seq
DB search
MASNGAAGNGSVGRRGGAQQRGGGGRDSSDLSSSASKKKQKDRANQESREAKRAAAAAVE
GVIAEVKKDVFVDWKQNVNEVIVRLRCGEAVLRIADINTTFTDTHCHVRFPDGRQWSCHL
QEEIEASCSRVQHKEKGGFLHVIMQKKIPFHIWPSLKSNKKEKEAVPIENIKDHHHQQQQ
QQGQQEEVKLVSLEPTENPNLQPPCSPGESRRGGKAERGVKRGLKNKPVFDKVAKDSVGV
KGGAKEGSTSTGKPGVTQGEPQEPSAKRTVGQLPTAAREATPPTDMRSAKPAAGGKAPHT
HLPAGSSPQTQRKDGDNRAERLGGGQEHELGAAVGRHANGTEVAEKPDQSSDWCGATAHG
SGGRPEAPVGNADRLEPLSPNGQVGPAASPETQGGRMDSGPEEKPSLQEAEQDTPICQQL
ESRDEGLTAAAGGAAVPSWSPGAAQRQGSCDGEEKQDQSKEEPPLELKQQEVPEPMVNLQ
TLKYDSYEKGTDLMVVNVYTKGICRDTARVIFREQDFTLIFQTSDTNFLRLHSDCGPNTV
FKWQVKLRNLIQPEQCSYSFTPSRLDITLKKRHSQRWGGLEASAPQGAVGGAKVAVPSGP
SCMEKSQPGSSQHSLPAKEEPPRVGEEKPKPAKVSSRGDDCGLDTVAPRSEHVAITKPEP
MPKPTCMVQPMTHAPPASNERHEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTREL
RDYFHDRAFEAEINCSNPLGTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQF
TGYAQHDAQEFMAFLLDGLHEDLNRIQNKPYTETVDSDGRLDEVVAEEAWQRHKMRNDSF
IVDLFQGQFKSKLVCPTCSKVSITFDPFLYLPVPLPQKQKVLSVFYFAKEPHKKPIKFLV
SVSKENSSTAEVLDSISKNVRVRPENLRLAEVGKNRFQRLFLPSHSLDMVSSSDMLFCFE
VLSKEMAKERVVLLRVQQRLQVPNIPISKCAACQKPSPSEEDKLKRCTRCYRVGYCNQVC
QRTHWPNHKGLCRPNAENVGLPFLVSVPESRLSCSRITQLLEGYSRFSVNVFQPPFQSDR
TSPETSQCRGDHPPMPAGPPEGLGPGDEAMDGGNTRAAGDMESPSLLSESQAECPQFSGD
TNSLSSSSQTSLSTTQTADSGFSEPISSTSCCSLDPHAEKETSCEKAVRPEAAVTGYQHP
SESASGHASQFYIALLDSDNKEQRLDEREDLLADLPEDTKLELVWKNNERLKEYVLVSSK
ELEYDEDPGSLSETARAGHFTLEQCLNLFTKPEVLAPEEAWYCPKCQQHREASKQLLLWR
LPNVLIIQLKRFSFRSFIWRDKINDMVDFPVRNLDLSQFCIGQKDEEQMQQPPIYDLYAV
INHYGGMIGGHYTAYARLPSDKNSQRSDVGWRLFDDSTVTMVEESQVVTRYAYVLFYRRR
NSPVERPPRFLRPESPASAGATASQGSTQSLFGTDLDPEGPPTLTQEVPSDLFALSGECS
ATSHSNMEEVD
NT seq
4536 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaacggtgcagccggtaacgggtcggtcggccgtcgcggaggagcccagcag
agagggggcgggggtagggacagctccgacctgtcctccagtgccagcaagaagaagcag
aaggaccgggccaaccaggagagcagagaggccaagagggcggccgctgcagcagtagaa
ggggttattgccgaagtcaagaaagatgtgtttgtggactggaaacagaatgtaaatgaa
gtgattgtcagactgcgctgtggggaggctgtgctgaggatagcggatatcaacacaacc
ttcactgatacgcactgccacgtgcgcttccctgatggacggcagtggagctgccatttg
caggaggaaattgaggcgtcatgtagcagagtccagcacaaggagaaaggaggcttcctg
catgtcatcatgcagaagaagattcccttccacatctggccttcgcttaagtccaacaag
aaggaaaaggaggcagtacccatagagaacataaaggaccaccaccaccagcagcagcag
cagcaagggcagcaggaggaggtgaagcttgtttctttggagccaacagagaatcccaat
ctccagccaccctgctcacccggcgagtcaagacgcggcggcaaggctgagcggggtgtc
aagcgtggcctgaaaaacaaaccagtgttcgacaaggtagccaaggactctgtgggggtg
aaaggtggagctaaagagggctcaacctctaccggcaagcctggagtcacgcagggcgaa
cctcaggaacccagtgccaagcgtaccgtcggacagctgcccaccgccgccagggaggcc
acgcccccaaccgacatgcgctctgccaagcctgcagccggcggtaaagctccacacaca
cacctgcccgctggttcgagcccacagacccaacgcaaagatggagacaaccgagcagag
agactaggaggcggccaggaacacgagctaggagctgctgttggaaggcatgccaacgga
actgaggtggcagagaagccagaccagtcgtcagactggtgtggagcaacagcacatggc
agcggtggccgaccagaggctccggtcggcaacgcagatcgcctcgaaccgctcagcccc
aacggccaagttggccctgccgcttctccagagacacagggaggtagaatggattctggg
ccagaggagaagccctcgctgcaggaagcggagcaggatacccccatctgccagcagctt
gaatccagagatgagggtttgacggcagctgctggcggggccgcagtaccaagctggtca
cctggtgctgctcagaggcagggcagttgtgacggagaggagaagcaggaccagtccaag
gaggagcctcctttggaactgaaacaacaggaagtccccgagccgatggttaacctgcag
actttgaagtacgactcgtacgagaagggcaccgacctgatggtggtcaatgtttacaca
aaggggatctgtagggacacggcaagggtcatcttcagggaacaagactttaccctcatc
tttcagacaagtgacactaactttctgcggcttcattcagactgtggacccaacactgtc
ttcaagtggcaagtgaaactcaggaacctgatccagcccgagcagtgcagctactccttc
accccgtcccgacttgacatcaccttgaagaaaaggcacagccagcgctgggggggcctg
gaggcctccgccccacaaggtgcagtgggtggcgccaaggtcgctgtgccctctggtcct
tcctgcatggagaagagccagccaggcagcagccagcacagcctgccagccaaggaggag
cccccgagggtcggggaggagaaacccaagccggccaaggtgtcatccagaggggatgac
tgtggtctggatacagtggctcctcgcagtgagcacgtcgctatcaccaagccagagccc
atgcctaagccaacctgcatggtgcagcccatgacccatgcaccgcctgccagcaacgag
cgccatgaagaagaggaggagaagaaggtgtgcctgcctggttttacaggattggtaaac
ctcggcaacacatgtttcatgaacagtgtcatccagtccctgtccaacaccagagaactc
agggattactttcatgatcgagcatttgaggcagaaatcaactgcagtaatccgctggga
acaggaggcaggctagccattggcttcgctgtcctgctcagggctctttggaaaggaaca
catcatgccttccaaccctcaaaactcaaggcgatcgtggccagtaaagccagtcagttc
acaggttacgctcagcacgacgcccaggagttcatggctttcttgttagatgggctccac
gaggacttgaaccgcatccagaacaaaccttacacggagactgtggactctgatgggcgg
ctcgatgaggtagttgcagaggaggcatggcagaggcacaagatgagaaatgattccttt
atagtggacctcttccaaggccagttcaaatccaagcttgtctgcccgacatgctccaag
gtgtcaatcacctttgaccctttcctctacctgcccgtgcccttgccccagaaacaaaag
gtgctctcggttttctactttgccaaggagcctcataaaaaacccatcaagtttttagta
agtgtgagcaaggagaactcgagcaccgctgaagtcctcgattccatctccaagaacgtc
agggtcagaccagagaacctccgactggcagaggtggggaagaatcgcttccagcgcctg
ttcctgccgtcccattccctggacatggtgtcttcttctgacatgttgttctgctttgag
gtgctttccaaagaaatggccaaagagagagtggtgttactcagagtgcagcagagactt
caggtcccaaatatccccatctcaaagtgtgccgcttgccagaagccttccccgtctgag
gaggacaagctgaagcgttgcactcgctgctaccgcgtcggctactgcaaccaggtgtgt
cagaggacccactggcccaaccataagggtctgtgtcggcccaacgcggagaacgtgggc
ctgcccttcctggtcagcgtgcctgagtcccgcctctcctgttcccgtatcacccagcta
ctcgagggttactccaggttttccgtcaatgtgttccagcctcctttccagtcagacagg
acatccccagaaacatctcagtgccggggggaccacccgccaatgccagcaggccctcct
gagggtctcgggccaggagatgaggccatggatggtggtaatacgcgtgcggcgggggat
atggagagtccttcgctgttgtctgaatcccaagccgagtgtcctcagttctccggggac
acaaattccctctcctcctcctcccaaacttcgctctccaccacgcaaactgcagattct
ggattttctgagccaatctcctccacctcctgctgctctctggaccctcatgctgaaaag
gagacgtcctgtgagaaggcagtgcgaccggaagctgcagtaacgggttatcagcatccc
agtgaatcagcatcaggtcacgccagtcagttttacatcgctctgctggactctgacaac
aaggagcagaggctggatgagagagaggaccttctggccgacctccccgaggatacaaag
ctggagctggtgtggaagaacaacgagcgtctgaaggagtacgtcctggtgagctccaaa
gagctggagtatgacgaggatcccggctctctgagtgagacagccagagcaggacacttc
accttggagcagtgcctcaacctcttcacaaagccagaggtgctggcaccagaggaggca
tggtactgtccaaagtgccagcagcacagagaggcctccaaacagctgctgctgtggcgt
ctgcccaacgttttgatcatccagctcaaacgcttctccttcaggagctttatctggaga
gataagatcaacgacatggttgactttcctgtcaggaatctggatctaagtcaattctgt
attggccagaaggacgaggaacagatgcaacagccccccatctacgacttgtatgccgtc
atcaaccactacggaggaatgataggcggccactacacggcctacgctcgcctgccaagc
gacaagaacagccagcgcagtgacgttggctggcgtctgttcgacgacagcacggtgacc
atggtggaggagagtcaggtggtgacgcgctacgcctacgtcctgttctaccggcggcga
aactcccccgtggagaggcccccgcgcttcctcaggcccgagtcccctgcctctgcagga
gccaccgccagccagggctctacccagtcgctgtttgggactgacctggatccagaagga
ccacccacgctgacccaggaggtcccctctgacctcttcgccctctctggagagtgttct
gcaacatcccacagcaacatggaggaggtggactag
DBGET
integrated database retrieval system
