Pungitius pungitius (ninespine stickleback): 119222339
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Entry
119222339 CDS
T07626
Symbol
trim33
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM33 isoform X3
KO
K08883
tripartite motif-containing protein 33 [EC:
2.3.2.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ppug01001
]
119222339 (trim33)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119222339 (trim33)
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119222339 (trim33)
Protein kinases [BR:
ppug01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
119222339 (trim33)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119222339 (trim33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-B_box_Trim66
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
119222339
NCBI-ProteinID:
XP_037334801
LinkDB
All DBs
Position
1:complement(24204562..24223285)
Genome browser
AA seq
1210 aa
AA seq
DB search
MADNKGEEDMEPSANSDSVLAAQDNEQPEKKDENAVIVIDSNTKGEDETESNDKGNETPT
PTSDGGDVSSSGAAAAAAGEVNVSGSNAVSPTGSSSTNAEPVAAETVPAANAPVSGVTTE
MSPPPTAPAATPVSTPINFLDTCAVCKQSLQSRDCEPKLLPCLHSFCLKCIPQPDRQISV
QVPGPHGQTDTHIVNVMRCSVCHQDYKQSDIIDNYFVKDTTEASGASDEKAAQVCTSCED
NAGTIGFCVECGEWLCKTCVEAHQRVKITKDHKIHTKEDADAASESVGTSGQRPVFCPIH
KQEPLKLFCETCDTLTCRDCQLLEHKEHRYQFLEEAFQNQKGIIETSVAKLQEKKNYVHY
SVSQVQSRLKELNDTHKKVEHEIKIAVFTLINEINKKGKSLLQQLESVTKERSMRLVSQH
KDTTQLAQQIHHVLGFCQWAISTGSSTALLYSKRLILFQLRQLFKARLEPAPQANGVVRF
FCDPTFWAKNVVNLGNLVIEKPPIPVQQPGVMVGGPPISPGQVHHSKQAGQINLAQLRLQ
HMQQAAYAQQKHHNHQQQQQQQQQQQQQQQQQHQQHQQQQIQQQMRIASQISQQHARQTA
QPMGQQQPPRLISMQQLPRGPVGMNGGPGPPMYSSSHHMRLPGPPQVRMATAQPRLNGQQ
YPAMMQPQLQRQHSNPGHAGPFPVASLHNANPTSPTSASMAGAHTHRGPASPVIGPIELI
PSVTNPENLPCLPEIPPIQLEDAGSSNLGHLLSRYITASTQHHLGSVDMNPSPGLSTHSP
GSSGLSNAHTPARPSSNSSTGSRGSCSSAGRAGPGGGASVDQLRVKQEPGTEDRYNCPAS
SLKTELGKDSGRSACMMSSPDNSTLPVLGVVSTGQDACKALAERIKTEPQSDPPCSGLNG
SSAAASTANSTMTSTTSLSSENNNNNSSSIVAAPLTNGNSSKGTDDIGEGVLAGTGNSGG
KEEDPNEDWCAVCINGGNLLCCDRCPKVFHMKCHVPTIKIFPTGDFLCTFCRSLTTPEIE
YCDDSKKIKGEQDLSPQDQRKCERLLLHIFCHELSVGFREPVASSVPNYFKIIKQPMDLK
KVKRRLQLRSSQYYRSIQEFVSDMRLIFKNCADYNEMSRIIQVYDEEKQINTQVGSEMAI
SGKAVSLYFEEKLLETFPGQSFAETTETPETECPETKEKMDDGDTDDSEDHFIQPRRKRL
KTDEKVFHIK
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacaaaggcgaggaggatatggagccatctgctaattcggactctgtgctc
gcagcacaagataacgagcagccagaaaagaaagatgaaaatgcagtcatagtcatagac
tctaatacaaagggcgaggacgaaacagagtccaacgataaaggcaacgagacaccaaca
cccaccagcgacggcggagacgtaagcagcagcggggctgctgctgcagcagctggggaa
gtcaatgttagcggtagcaacgccgtcagcccgactggctccagcagcaccaatgcggag
ccggtggcagctgaaaccgtgcccgccgcgaatgctcctgtcagtggtgtcaccactgaa
atgtcccccccaccgacggctccagcggctacgccggtatcgactcccattaattttctg
gatacgtgcgcagtgtgtaaacaaagtcttcagagccgagactgtgaacccaaacttctg
ccctgtttgcactccttttgcctgaaatgtatcccgcaaccagatcgacagatcagcgta
caggtacccggaccacacgggcaaacggacacacacatagtaaatgttatgcgctgttca
gtatgccaccaggactacaaacagagcgacatcattgataactactttgtcaaagatacc
acagaggccagcggtgcgtctgatgaaaaggctgcacaggtatgcacaagctgcgaggac
aatgcaggaaccatagggttttgcgtggagtgcggcgaatggctgtgtaagacctgcgtg
gaggcccaccagcgggtgaaaataaccaaggaccacaagattcacacaaaggaggatgct
gacgctgcctccgagtctgttggtacttcggggcagaggccggttttctgtccgatccac
aaacaggagcctctgaagcttttctgtgagacctgtgacacattgacctgtagggactgc
cagctgctggaacacaaggagcacaggtatcagttccttgaggaggctttccaaaaccag
aaagggatcatcgagaccagcgtggccaaactacaggaaaagaagaactatgtccattac
tctgtctctcaggtgcaaagcaggttaaaagagctgaatgatacacacaagaaggtggag
catgagatcaaaattgcagtatttactcttattaatgagatcaacaagaagggcaagtcc
cttctacagcagttggagagtgtgaccaaagagcgtagtatgaggcttgtgtctcagcat
aaggacaccacccagctggcccaacagatccaccacgtcctcggcttctgccagtgggcc
atctctactggcagcagcacggcgctgctctacagcaagaggctgattctgttccagctt
cgccagctcttcaaggccagactagagccagcaccccaggctaatggagttgtgcgcttc
ttttgtgaccccactttctgggccaaaaacgtagtcaatctaggtaatttggttatcgag
aagcccccgatacccgtgcaacagcccggtgtgatggtgggaggtccacccatttctcca
ggacaggttcatcacagcaaacaagcaggacagattaacttggcccagctccggctgcag
cacatgcagcaggcggcctatgcacagcaaaagcaccataaccaccaacagcagcaacag
caacagcagcagcagcagcaacaacaacaacaacaacaccagcaacaccagcagcagcag
atccagcaacagatgcgcattgcctcccaaatatcccagcagcatgcaagacagaccgcg
caaccgatgggtcagcagcagcctccaaggctcatcagtatgcaacagctaccgaggggg
cctgtgggtatgaatggtgggccaggtccccccatgtactcttcctcccaccatatgcgt
ctcccgggtccaccacaggtccgaatggccacagctcagcccagacttaatggacagcag
tatccggccatgatgcagcctcagctccagagacagcattccaacccaggtcacgcaggc
cctttcccggtggcatcccttcataatgccaaccctacgagtcctaccagtgcaagtatg
gcaggtgcccatactcaccgcggccctgcgagcccagtcataggccccatcgagctgatc
ccctccgtcactaaccccgagaacctgccctgcctgccggagatcccgcccattcagctg
gaggatgccggttccagcaaccttggacacctcctgtctcgctacatcacagccagcacg
cagcatcacctcggctcagtggacatgaacccctcgcctggactctccacacactctcct
ggatcatcaggtttgtcgaatgcccacacaccagcacgaccttctagcaattccagcaca
ggtagcaggggcagctgtagctctgcggggagggcggggccaggaggcggagcttcggtg
gaccagctgagggtgaagcaagagcctggtacagaggaccgctacaactgtccagcatct
tctctgaagacggagctgggcaaagattccgggaggagtgcctgcatgatgagcagtccg
gacaacagcacccttcctgtattgggagttgtgtctactggccaagatgcttgcaaggct
ttagcagagcgcatcaaaacagaaccccaatccgatcctccgtgttctggactaaatggc
tccagtgccgcagcctctactgcaaattcaactatgacctccactacctcgttatcctct
gagaacaacaacaacaacagcagcagcatcgttgccgctccccttactaatggaaactcc
agcaaggggacagacgacataggggaaggggtgttggctggaacaggcaactctggtggg
aaagaggaagacccaaatgaagactggtgtgctgtttgtatcaacggtggtaacctgcta
tgctgtgaccgctgcccaaaagtcttccacatgaaatgccatgtgcccaccataaaaatc
ttcccgacgggtgactttctttgtacgttttgccgaagcctgacaaccccggagatagaa
tactgtgacgacagcaagaaaatcaaaggagagcaggacctgagtccacaggaccaaagg
aaatgtgaacgccttctgttgcacatcttctgtcatgagctcagcgtgggcttcagggaa
ccggttgctagctctgtgccgaactacttcaagattatcaagcagcccatggacctgaag
aaggtgaagaggaggctccagttgcgaagctcccagtactaccgttccatccaggagttt
gtgtccgacatgcgtctgatcttcaaaaactgtgccgattacaacgagatgtctcgaata
atccaggtttatgatgaggagaaacagattaatacgcaggtggggtccgagatggcgata
tctggcaaggcggtaagcctgtacttcgaggagaagctgctagagacgttcccagggcag
agcttcgccgaaacaacagaaacgccggaaacggagtgcccagagaccaaggagaagatg
gacgacggcgacacagacgactccgaggaccacttcatacagcccagacgcaagcggtta
aaaacggatgagaaagtgttccacattaagtga
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integrated database retrieval system
