Pungitius pungitius (ninespine stickleback): 119222342
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Entry
119222342 CDS
T07626
Symbol
sf1
Name
(RefSeq) splicing factor 1
KO
K13095
splicing factor 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119222342 (sf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119222342 (sf1)
Spliceosome [BR:
ppug03041
]
Complex A
Other components
Complex A specific factors
119222342 (sf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
119222342
NCBI-ProteinID:
XP_037334804
LinkDB
All DBs
Position
1:11905553..11915219
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AA seq
677 aa
AA seq
DB search
MATGANATPLGKLHPSIGAKRGFDAGPGAGNGLMPAPGPPAPFPSLQAFQPPMPTVSFPQ
PLQFNPVAAFPTQAPLQPVVGGGMAKADFCQKKSRKKSRWSSETPDQKTVIPGMPTVIPP
GLTRDQERAYIVQLQIEDQTRKLRTGDLGIPVNPEDRSPSPEPIYNSEGKRLNTREYRTR
KKIEEERHSLITEMVGLNPDFKPPADYKPPATRVNDKVMIPQDEYPEINFVGLLIGPRGN
TLKNIEKECCAKIMIRGKGSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQI
RNILKQGIETPEDQNDLRKMQLRELARLNGTLREDDNRILRPWQNSEPRSITNTTLCTKC
GGAGHISSDCKYTSSFAAHRATGGEPPQSAQDKARMDKEYLSLMAELGEAPVPTSGGGHS
SSHGGSQRSSGLNNNQQSSRPPWMSSSQSESRNFHSMHGAPGGHGGHHSYPPPMPNMGGP
PMPPNPNGLPPPWMQPPPPPMGQGPGPHGHPMGLLPPPMSMMPPPPPPPSNQPPPPPSGP
LPPWQQQAPPPPPTSSMATSTPLPWQQNTTTTSSPGTGSLPPWQQPQQSATSGAQPPPPM
GSPSMVPPPPGVQPPLPPGAPPPPPPPPPGSTGMMYAPPPPPPPMDPSNYVTMMGMGVPG
MPPFGMPPAPPPPPPQN
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggccacgggcgcaaacgcaacacctttaggaaagttgcaccccagcattggcgctaaa
cgaggatttgacgccgggcctggtgcggggaacgggttgatgccagcaccggggccgcct
gcaccgttcccttctctgcaggcgttccagcccccgatgccaacggtatcatttcctcaa
cctcttcagttcaaccccgtggccgcttttccgacccaggctccactacaaccagttgtg
ggtggaggaatggccaaagcagatttctgtcagaagaaatcaaggaagaagagtcgctgg
agcagcgagacgcctgatcagaagactgtcataccgggcatgcccactgttattccccct
ggattgacccgggatcaagagagagcctatatagtccaactgcagattgaagaccagact
cgtaaactgcgtacaggagacctgggaatccctgttaaccctgaggacaggtctccctct
cccgagcccatctacaacagcgagggcaagaggttaaacactcgtgagtatcgcacccga
aagaagattgaggaagagcgtcactccctcatcaccgagatggttggactcaacccagac
ttcaagcctcctgccgactacaaacctccagccaccagagtcaacgacaaggttatgatc
ccccaagacgaataccctgaaataaactttgttggtctgctgattggaccacgtggtaat
acactgaagaacattgaaaaggagtgctgcgccaagatcatgatccggggaaagggttct
gtgaaggagggaaaggtgggacggaaggacggacagatgctgcccggggaagacgagcct
ctgcacgccctggtcactgccaacacaatggagaacgtcaagaaagctgtagagcagatt
cgcaacattctgaagcaaggcattgagacgcccgaggatcagaacgacctacggaagatg
cagctgagggagctcgccagactcaacggcacactgagggaagatgacaacaggatcctt
cgtccttggcagaactcggagccacgcagcattaccaacaccaccctttgtacaaagtgt
ggtggagcaggccacatctcctccgactgcaagtacaccagctcattcgctgcccacaga
gcgacaggtggcgagcctcctcagtcggcccaggacaaagctcgtatggacaaggaatat
ctgtctctgatggccgaactaggggaggccccggttcccacatctggtggaggacactcc
agcagccatggagggtcgcagcggtcctcgggactcaacaataaccagcaatcaagccgg
cctccttggatgagctccagtcagtctgagagcaggaacttccatagcatgcacggggca
cctggcggccatggaggacaccatagctaccctccccccatgccgaacatgggaggtcct
cctatgccccccaacccgaatggtctgcctcccccctggatgcagccccctcctcctccc
atgggacagggaccaggacctcatggacatcccatgggtctgctgccacctccaatgagc
atgatgccgcctccgccacctccccccagcaaccagccaccacctcctccctctggaccc
cttccgccgtggcaacagcaggctccaccaccccctcccaccagcagcatggcaaccagt
acaccgctaccgtggcaacagaatacaaccaccacgtccagccctggcaccggcagcctg
cctccatggcagcagccccagcagtctgcaacctccggagcccagcccccaccacccatg
ggttcaccatccatggtgccacctccccctggtgtccagccccctttacccccaggtgcc
cctcctcctccccctccccctcctccaggctcaactggcatgatgtatgcccctccgccg
cctccgcctcccatggacccttccaactatgtcaccatgatggggatgggggtgccgggc
atgcccccctttggcatgccccctgccccaccaccccctcctcctcagaattaa
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