Pungitius pungitius (ninespine stickleback): 119222385
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Entry
119222385 CDS
T07626
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04120
Ubiquitin mediated proteolysis
ppug04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119222385 (ube4b)
04120 Ubiquitin mediated proteolysis
119222385 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119222385 (ube4b)
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119222385 (ube4b)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
U-box type E3
119222385 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
119222385
NCBI-ProteinID:
XP_062420104
LinkDB
All DBs
Position
1:complement(28194138..28204014)
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AA seq
929 aa
AA seq
DB search
MLSLMLHGFIFFRIPENGLEFVNSILGASGGGMSCNSASDRFTIETCKETEMLNYLIERF
DSVGMEERKAPKMCSQPNVSQLLSNIRSQCISHIALVLQGTLTQPRSPLHQSLLVPYLLC
RNLPYGFIQELVRITHQEEGVFALIFTPILHGLALAVKECSFDSDNFKFPLMALAELCEI
KFGKTHPVCNLVTSLPLWCPQPLSPGCGREIQRLSYVGAFFSLSVFAEDDTKVGDKYFSG
PAITTENTRVVSQSLQHYLESARGDLFKVLHNILLNGETREPALNYMAALVNYNVKKAQM
QTDDKLVSTDGFMLNFLWVLQQLSMKIKLETVDPYYIFHPRCRLVVSLEETRLKATMEEL
KGWLTELHEDPNKFSEPKFPTECFFLTLHAHHLSILPGCRRYIRRLRAIRELNRTVEELK
NSESQWKDSPLASRHREMLKRCKTQLKKLVRAKACADVGLLDENLLRRCLQFYSTVIQLI
LRMVDPAYPNINLPLHPEIPKSFAALPEFYIEDVAEFLLFVVQYSPQVLYEPCVQDIVTF
LVVFICSQNYIRNPYLIAKLVEVLFVTNPAVQPRTQRFSEMMENHPLSVKQLVPALMKFY
TDVEHTGATSEFYDKFTIRYHISTIFKSLWQNLAHHGTFMEEFNSGKQFVRYINMLINDT
TFLLDESLESLKRIHEVQEEMKNKEQWEQLPREQQQSRQSQLTQDERVSRSYLALATETV
EMFHILTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPKKLLDQ
LTDIYLQLDCARFAKAIADDQRSYSRELFEEVISKMKKAGIKSSIAIEKFKLLSEKVEEI
VAKNSQSEMDYSDAPDEFKDPLMDTLMTDPVILPSGNIMDRSIILRHLLNSPTDPFNRQP
LTESMLESVPELKERIHTWMREKQGGRLV
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcactaatgcttcatggttttatttttttcagaatcccagagaatgggctcgag
tttgttaactctattcttggtgcatctggagggggaatgtcctgcaattcagccagcgat
cgcttcaccatcgagacgtgcaaagagacagagatgctgaactacctcattgagcgtttt
gacagtgttggcatggaggagaggaaagctcccaaaatgtgtagccaaccaaatgtcagc
cagcttctgagcaacattcgctctcagtgtatttctcatattgccctggtcctgcaaggc
accctgacgcagccccggagccctctccatcagtctttgctggtaccttatctgctgtgt
cggaacctaccgtatggcttcattcaggagctggtgcgcatcacccaccaggaggaaggg
gtgttcgctttgatcttcactcccatccttcatgggctggctctcgcagtgaaagaatgt
tccttcgacagtgacaactttaaattcccccttatggcattagctgagctttgtgaaata
aagtttggaaagactcacccagtgtgcaatttggtaacgtcgctgcctttgtggtgtccc
caacccctgagccctggttgtggcagagagatccagagactttcctacgtgggagctttc
ttcagcctttctgtgttcgcggaggatgatacaaaagtgggagacaagtatttctctggc
ccagccatcaccacggagaacacgcgagtcgtcagccaatcactgcagcactacctggag
tccgctaggggcgacctgttcaaagttctccataacatcctactaaacggagagacgcgc
gagccagctctcaattacatggcagcgctggtcaactacaatgtgaagaaagctcagatg
cagaccgatgacaagctggtgtcgacagacggcttcatgctcaacttcttatgggtgctg
caacagctgagcatgaagatcaagctggagacagtggacccttactacattttccaccca
cggtgccgccttgttgtcagccttgaggagacgcgtctgaaagccaccatggaggagctc
aagggctggctgaccgaactgcatgaagaccccaacaagttctcagaacccaagttcccc
accgaatgtttcttcttgacgctgcatgcccaccatttatccatcctgcctggctgcagg
cgttacatccgcaggttacgagccatccgcgaactgaacaggactgtagaggagctgaag
aacagtgaaagccagtggaaagattctcccctggctagtcgtcacagagagatgctcaag
cgatgcaaaacccagctcaagaaactggtgcgagccaaagcttgcgctgacgtcggcctt
ctggatgagaacctgctccgcagatgtctgcaattctacagcacagtcatccagctcatt
ctacgcatggtggaccctgcctaccccaacattaacctgccactgcaccccgagattccc
aaaagcttcgccgctctgcctgagttctacattgaagatgtggcagagtttctgcttttt
gtcgtgcagtattctccccaggttttatatgagccgtgtgtccaggacattgtcaccttc
ttggtggtgttcatctgcagccagaactacatcaggaacccttaccttatcgccaagttg
gtggaggtgctgtttgtcaccaaccctgctgtacagcctcgtacgcagcgattctctgaa
atgatggagaaccatccgttgtctgtcaaacaactggttcccgccctcatgaagttctac
actgatgtggaacatacaggcgccaccagcgagttctatgataagttcactatacggtac
catatcagcactatcttcaagagtctgtggcaaaaccttgcccaccatgggaccttcatg
gaggagttcaactctggcaagcagtttgtgcgctacatcaacatgttgattaatgacacc
accttcttgttagatgagagccttgagtctctcaagcgtatccacgaagttcaagaagag
atgaagaataaggagcagtgggaacagctgcccagggagcagcagcagagtcgccagtcg
cagctgactcaggatgagcgggtgtcccgctcctatctggccctggccacagagacggtt
gaaatgttccacatcctcaccaagcaggtccagaagcctttcctcaggcctgagctggga
cctcgtttagctgcgatgctaaacttcaacctgcagcagctctgtgggcctaagtgtcgg
gacttgaaggtggagaaccctgagaagtatggctttgagcccaagaagctcttagaccag
ctgaccgacatctacctgcagctggactgtgcccgcttcgctaaagccattgcagatgac
cagcggtcgtacagtcgagagctctttgaagaggtgatctcaaagatgaagaaggctggt
attaagtcttctattgccattgaaaaattcaaactactatcagaaaaggtggaggaaata
gttgccaagaactcccaatctgaaatggactacagcgacgcacctgacgagttcaaagac
cctctgatggacacactgatgactgaccctgtgattctgccttcgggcaacataatggat
cgatccatcatcctgcgccacctgcttaactcccccactgatcccttcaacagacagcca
ctcacagagagcatgctggagtcagtgcctgagctgaaggagaggatccatacctggatg
agagaaaaacaaggcggacggcttgtctga
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