KEGG   Pungitius pungitius (ninespine stickleback): 119222396
Entry
119222396         CDS       T07626                                 
Symbol
per1b
Name
(RefSeq) period circadian protein homolog 1b isoform X1
  KO
K21944  period circadian protein 1
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ppug03400]
    119222396 (per1b)
DNA repair and recombination proteins [BR:ppug03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    119222396 (per1b)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 119222396
NCBI-ProteinID: XP_037334909
LinkDB
Position
1:5061364..5073494
AA seq 1354 aa
MSYEDPKSAPDHEEESDGLSSPTSGAAGADAAAAAQERERGANSDDMDGLSSGNDSGERE
SEGGMDRDGGSHGRQSVRSSSHSSSNGKDSGMMLEAAGSNKSSSNSQSLSPPSSSLAYSL
LSTSSEHDPPSTSGCSSNQSARAQTQKDLMKAIKELKLRLPTERKAKGHTSTLNALKYAL
QCVKQVRANKEYYHQWSVEECHGCSLDLSAFTIEELDNITSEYTLKNTDTFSMGVSFLSG
KVVYVSPHGSSLLRCKPERLQGTMFSELLAPQDVSTFYSGTAPCRLPNWASCIGFASPPA
DCTQEKSMFCRISADQAQAGEMRYYPFRLTPYQLTIRDSDEAEPQPCCLLIAERVHSGYE
APRIPPEKRIFTTSHTPSCLFQEVDERAVPLLGYLPQDLVGTPTLLYIHPEDRPLMVAIH
EKIFQFAGQPFDHTPLRMCARNGEYLTIDTSWSSFVNPWSRKVAFIVGRHKVRTGPLNED
VFTTAPCCETRATTPDVVRLSERIHRLLAQPVHSGSSQGYSSLGSSGSRASRRSHHQRLC
ASGASSSDASGPAAAAVVSQKPMTFQQICKDVHMVKTNGQQVFIESRNRPQPRKATSTGL
RAISSDPIRSLIADMTKPPAPLVPAALLPPKDPPTGFSYQQINCLDSIIRYLDSCNIPNT
VKRKCCSSTSDEDKQLEAGSSTGGSVNLVSEPPPLPPLTMATKAESVVSVTSQCSFSSTI
VHVGDKKPPESDINMAEAPPTTAPAPPATTLLAIKAITFPPLPPQAAQPARDSRGSMGGG
GGGGGGGRMGLTKEVLSAHTQQEEQAFLDHFKDLSKLRVFDQAASQAPAANPLSRGARCS
RDYPPAGSGASHRRGGKRLKHQESSDRQSSLGLDPRAGAAPGPLSVPIGPPTHNSPSWPS
VGSQAGIPAAPFAPGVLPIYPVYPPLAQPLPDASPFPPAQMVPPMVALVLPNYIFPQMGV
PIAQPGPVPGHFFNPNFAYPAATHGGVSGVVSNSAALQAACAASRSSTPQSCSHTPAERE
GAESPLFQSRCSSPLNLLQLEETPSNRLEVPAALAAAAAQQATPCVQGGAAGVQSSANQR
SSDDSSKENGDDAMSTSSDLLDMLLQEDARSGTGSAASGSGSSGTRSSGSGSGSNGCSSF
GTSGMSSSQGSHTSKYFGSIDSSENDHSRKQPAGGSSSAGGDGGEEQFIKCVLQDPIWLL
MANTDDKVMMTYQLPVRDMETVLREDREALRSMQKHQPRFSEDQKRELSQVHPWIRTGRL
PRAINVSGCAGCKSPPCSPAATAAAPFDVEIHEMELGGVLKDREANRSETPMEGGHPEDE
EQDGGGAQDGNQEMAAAEEHVTSEDAKDKSHMTH
NT seq 4065 nt   +upstreamnt  +downstreamnt
atgagctatgaggatcccaaatcagcgcccgaccacgaggaggagtcggacgggttgagc
tctccgacaagcggcgcggccggtgccgacgccgccgccgccgcccaggagcgggaaagg
ggcgccaactcggacgacatggacggactctccagcgggaacgactccggggagcgggag
agcgaaggcgggatggaccgggacggcgggtcgcacgggcgccagtccgtgcgcagcagc
tcccacagctcgtccaacggcaaggactccggcatgatgctggaagccgcggggagcaac
aagagtagctccaactcccagagcctctcgcctcccagcagctcgctggcctacagcctg
ctgtcgaccagctcggagcacgaccccccctccacctccggctgcagcagcaaccagtcg
gcgcgggcccagacccagaaagacctgatgaaggccatcaaggagctgaagctccgtctg
cccaccgagcgcaaggccaagggtcacaccagcactctaaacgccctcaagtacgcactg
cagtgtgtcaaacaagtccgagccaacaaggagtactaccatcagtggagtgtggaggag
tgtcacggctgcagcctggacttgtctgccttcaccattgaggagctcgacaacatcact
tctgaatacaccctcaaaaacactgacactttctcgatgggcgtgtcgttcttgtccgga
aaggtggtgtacgtgtccccccacggctcctccctgctgcgctgcaagccagagcgtctc
caaggcaccatgttttcggagcttttggcgccgcaggacgtcagcactttctacagcggc
acggcgccctgccgcctgcccaactgggcctcctgcatcggattcgcttctccaccggcc
gactgcacccaggagaaatccatgttctgccggatcagcgccgaccaggcgcaggccggc
gagatgcgctactaccctttccgcctcacgccctaccagctgaccatcagagactcggac
gaggctgagccacagccctgctgcttgctcatcgcagagagggttcactctggatacgaa
gctcctcgtatccctccagagaagcggatcttcaccaccagtcacactcccagctgcctc
ttccaggaagttgatgagagggcggtgccgttgttgggctatctgccccaggacttggtg
ggcacccccaccctcctctacatccaccccgaagacaggcccttaatggtggctatacac
gagaagatctttcagtttgccgggcagccgttcgaccacacgcccctgaggatgtgcgcc
cgcaacggggagtacctgaccatcgacaccagctggtcttccttcgtcaacccctggagc
cggaaggtggcgtttatcgtcgggcgccacaaagtcagaacgggccctctgaacgaggac
gtgttcaccacggcgccgtgctgcgagacccgggccaccacgccggacgtcgtgcggctg
agtgagaggatccaccggctcctggcgcagccggtgcacagcggcagctcgcagggctac
agctccctcgggtccagcggctcgcgggcctcgcggcgctcgcaccatcagcgcctctgc
gcctcgggcgcctcgtccagcgacgccagcggccccgccgccgccgctgtcgtttcccag
aaacctatgaccttccagcagatctgtaaagacgtccacatggtcaagaccaacggacag
caggtgttcatcgagtcccgcaaccgccctcagcctagaaaagctacaagcacaggcctg
cgagcgatcagcagcgacccaatcagaagtttgatagcagacatgacgaaaccccccgcg
cctttggtcccggctgcgcttctaccgccgaaggacccccccaccgggttctcctaccag
cagatcaactgcctggacagcatcatcaggtacttggacagctgcaacattcccaacact
gttaaaaggaagtgttgctcctccacgtctgacgaggacaaacagctggaggccggcagc
agcacaggtggttcagttaaccttgtaagtgaaccacctcctctgcctcccctgaccatg
gccacaaaggcagagagtgtagtctcagtcacgtcgcagtgtagcttcagcagcaccatc
gtgcatgtgggagacaagaagcctcctgagtcagacatcaacatggcggaggctcctcct
acaactgcgccagctccgcccgcaacaacactcctcgccatcaaggcaatcaccttccct
cctttacctcctcaagctgctcagcccgcgagggacagccgtggcagtatgggaggagga
ggaggaggaggaggaggaggccgcatgggtctgaccaaggaggtgctgtccgcccacacc
cagcaggaggagcaggcgttcctcgaccacttcaaggacctcagcaagctgcgcgttttc
gatcaggcggcgtctcaggccccggccgccaaccccctgtcccgaggagcgcgctgttct
cgggattacccccccgcgggaagcggcgccagtcaccggcggggcggcaaaagactcaag
caccaggagtcctccgaccggcagagctccctgggtctggacccgagggccggcgcggct
cccgggcccctcagcgtccccatcggacccccgacccacaactccccctcctggccgtct
gtgggctctcaggccggcattcccgccgccccctttgctcctggcgtgctcccgatctac
cccgtctacccgccgctcgcccagcccctgccggacgcgtcgcctttcccccccgcccag
atggtgcctcccatggtggccctggtccttcccaactacatcttcccccagatgggggtg
cccatcgctcagccgggccccgtcccggggcacttcttcaatccgaacttcgcgtacccg
gccgccacccacgggggcgtctccggcgtagtgtcgaactccgcagcgcttcaggccgcc
tgcgccgcgtcccgcagcagcacgccgcagtcctgcagccacacgcctgctgagcgagag
ggcgcagagtcccccctcttccagtccagatgctcgtcgccgctcaacctcctgcagctg
gaagaaacgcccagcaaccgcttggaggtccccgcggcgctggcggcggcggcggcacag
caagccacgccctgtgtgcaaggcggtgcggccggggtgcagagctcggccaatcagagg
agctctgacgatagctccaaggagaacggtgatgatgccatgtccacctccagcgacctg
ctggacatgttgctacaggaagacgcccgctccggcaccggctccgctgcctccgggtca
gggtcgtcgggcacgaggtcctctggttcaggctccggctccaacggctgcagctccttt
ggcaccagtggcatgagcagcagccagggcagccacaccagcaagtactttggcagtatc
gactcgtccgagaacgaccattcccgcaagcagcctgcagggggcagcagcagtgccgga
ggagatggcggcgaggagcagttcatcaagtgtgtcctgcaggaccccatctggctgctg
atggccaacaccgacgacaaggtcatgatgacctatcagctgcccgtcagagacatggag
acggtgctgcgagaggaccgcgaggccctgaggagcatgcagaagcaccagcctcgcttc
tccgaggaccagaagagggagctgagccaggtgcacccgtggatccgcacggggcgcctg
ccgcgggccatcaacgtctctggctgtgctggctgcaagtctccgccctgctcgcccgcc
gccaccgccgccgcgccgttcgacgtggagatccacgagatggagctgggcggcgtgctc
aaggaccgcgaggcgaaccggtcggagacacccatggagggaggtcacccggaggacgag
gagcaggacggcggcggagcacaggacggcaaccaagagatggcggcggcggaggagcac
gtgacctcagaagacgcaaaggacaagtcgcacatgactcactga

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