Pungitius pungitius (ninespine stickleback): 119222400
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Entry
119222400 CDS
T07626
Symbol
sema4f
Name
(RefSeq) semaphorin-4F
KO
K06521
semaphorin 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
ppug04090
]
119222400 (sema4f)
CD molecules [BR:
ppug04090
]
Proteins
119222400 (sema4f)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sema
Sema4F_C
PSI
Motif
Other DBs
NCBI-GeneID:
119222400
NCBI-ProteinID:
XP_037334919
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Position
1:8944882..8982166
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AA seq
849 aa
AA seq
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MSPDGAMWTLLPMLCLLSGATWAATLSGLGDTILDPKKFHNVTNFSTFLLDRSTGMLFLG
AKDAILAVDTNGLNQKPKVIVWDVPEEKRKSCVAKGKTEVDCNNYIRLLEFLGDGRVYVC
GTYAFDPQCAFLELSSFTLEPTEGGGVKMETGKGKCPFEPSQHYTAVMAAGTLYTAATSN
FLGTLFDISRGTGAEQERIRTDRSINWLNDPEFVSSAFIQQSASSNPTGDDDKIYFFFTE
VAKEYDLYTKVKVPRVARVCKSDVGGMKTLQRRWTTFLKAQLVCEDKPSGQRYNILTDVF
TTERTPGDPSSTHFYGLFTSQWERDELSAVCVFSLSDISKVMDGPFKELKKTCDWAHPEP
VPTPRPGQCLNQALKDEGFDSSLNLPDKVLTFVRDHPLMENSVTAAPLLVRKGIQYTKLA
VTQTGSGDERRGAVLHLGTDRGELHQVAVVGENATLLQELSLFDSQEPVNNILLHKGWAL
VGSPLSLARVQAEGCALYSSCAVCARARGLGCVWSTEEDACRPTTAEPGPGDIVDNALRK
CDVAEGRCNPSTRELRVSVGLRLLLPCVQLSPRSCSWEHPPHRHTRQHHSDLEVTVANDS
LGEYICTCQEAGPSSRDPTPCRRAAYHLTLEGPSAGGTVAEGRGRHVLAIYILVFLMGLV
LGIFLLHFVTRRLSIARQGHHLPDNSLSSDKGRDLLGSSATPQSPISASLLSDGFRLTEK
RNGTATTNTSTTLLSNQGNGSPHGNSFSGALIHSNPNNGHGNSLYANCNTSSSGLKLTPE
IFVANLLDGRTGERGRPEMVERKFGERDEVDEGLGEGFADGAKGLDEELSRFPMFKSPAP
LALCEESSI
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctgacggtgcgatgtggaccctgctgccgatgctgtgcctgctctccggggcc
acctgggcagcgactctgagcgggctgggagacacgattcttgatccgaagaagttccac
aacgtgaccaacttcagcaccttcctcctggaccgctcaacgggcatgctgttcctcggg
gccaaggacgccatcctggcagtggacaccaacgggctgaaccaaaaaccaaaagtgatt
gtttgggatgtgccagaggagaagaggaagtcttgtgtggcgaagggaaagacggaggtt
gactgtaacaactacattcgtttgctggagtttctgggtgacggacgcgtctacgtgtgt
ggcacctacgccttcgaccctcagtgtgccttcctggagctctcctccttcactctggag
cccaccgagggtggaggagtgaagatggagacggggaagggcaagtgtccgtttgagccc
agtcagcattacacagctgtcatggcagctggtaccctttacacagcagccaccagtaac
ttcctgggaacgctgttcgacatctcgcgggggacgggcgctgagcaggagcgcatccga
actgatcgatccattaactggctgaatgacccggagtttgtgagctcagccttcatacaa
cagtctgcttcaagcaacccgacaggagacgatgacaaaatctacttcttcttcaccgag
gtggccaaggagtatgacctctacaccaaagtcaaagtgcccagggtggcccgagtctgc
aagtccgacgtgggagggatgaagaccctgcagcgacgttggaccaccttcctcaaggcg
cagctggtgtgtgaggacaagccgagcggtcagcgctacaacatcctcaccgacgttttc
accacggaacgcacgccgggcgatcccagcagcacacacttctacgggctgttcacctcc
cagtgggagcgcgatgagttgtcagcagtgtgtgtttttagtctgtctgacatcagcaaa
gtgatggacggccccttcaaagagctgaagaagacctgcgactgggctcaccccgagcct
gtccccacaccgcggcctggccagtgtttgaaccaagctttgaaggacgaggggttcgat
tcgtccctcaaccttcccgacaaggtgttgacgttcgtgagggaccaccccctgatggag
aacagtgtgactgcggcgcccctgctggtgcggaagggaatccaatacaccaagctggct
gtcactcagacgggaagtggggacgagcggaggggagcagtgctgcacctcggaacggat
cgcggggagctccaccaagtggcggtcgtgggtgagaacgccaccttgctgcaggagctc
tctctgttcgactcacaggagcctgtcaacaatatattgctgcacaagggctgggctctg
gtgggcagccctctgtctctggctcgtgtccaggctgaaggctgcgctctctattccagc
tgtgcggtatgtgccagagccagaggacttggctgtgtgtggagcacagaggaagacgcc
tgcaggcccacaacagcagagcctggtccaggagatattgtagacaacgccttgaggaag
tgtgatgttgcagaagggcgttgcaacccgtccacgagggagctgcgcgtttccgtgggt
ctgcgcctgctgctgccgtgtgtccagctgtctccccggtcctgcagctgggagcatccc
ccccaccggcacaccaggcagcaccactctgacctggaggtgaccgtcgcaaatgacagc
cttggggagtacatctgcacatgccaggaggcgggaccaagcagcagagaccccaccccc
tgccgcagagcagcctatcacttgacactggaaggcccgagtgctggaggaaccgtggcg
gaaggcagaggtcgtcacgtcctggccatctacatccttgtattcctaatgggtttagtg
cttggtatttttctcctgcactttgtgacgcggcgcctcagcattgcccgccagggtcac
cacctgccagataattcactgtcgtctgataaagggcgggacttgctgggctcttcagcc
acgccgcagtctcccattagtgccagcctgctgtccgatggattcagattgacggaaaaa
cgcaacgggacggcgaccacaaacacctctaccacgcttctaagcaaccaggggaatggc
agtccccatggcaacagcttcagcggcgccctgatccacagcaaccccaacaatggccat
gggaattccctgtatgccaactgcaacacaagtagcagcggcttgaagttaacccctgag
atatttgtggcgaacttgctggatggaaggacgggggaaagggggaggcccgagatggtc
gagaggaagtttggggagcgggatgaggtagatgagggtctgggcgaggggtttgcggat
ggagcaaaaggactggacgaggagttgtcccgctttcccatgtttaaatcaccagcaccg
ctggctctgtgtgaagaaagttcgatatga
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