Pungitius pungitius (ninespine stickleback): 119222408
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Entry
119222408 CDS
T07626
Symbol
arhgef15b
Name
(RefSeq) rho guanine nucleotide exchange factor 15
KO
K20687
Rho guanine nucleotide exchange factor 15
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119222408 (arhgef15b)
Membrane trafficking [BR:
ppug04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
119222408 (arhgef15b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
PH
SH3_1
SH3_9
SOS1_NGEF_PH
RHG20_PH
BSP_II
CDC45
Motif
Other DBs
NCBI-GeneID:
119222408
NCBI-ProteinID:
XP_037334931
LinkDB
All DBs
Position
1:complement(5236234..5247187)
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AA seq
1012 aa
AA seq
DB search
MSVQETPRASTSPGPLKPEIPQKPSPRTVPSPPGGDGGKVKMIVKKFSKTDLREAPGQRP
AANGAAEASQIKRSGRPPTVKPKPRLPLGGATAPPLPAKRRRTGQRQAKEEGGDEGDGNQ
VEGGRSAPDGKEVEVRLVGGGEAEAEHTHTPLSPCCDPGCSCVCHLQQPGMILIWVPVDT
NGGEEEQEEEEEEEEEQEEQEEEEEEEGGDEGEPCAIEISVEDEELSKEDGEVTAGGGED
SKPEYELVDQREEWKQKKEKFHQALDVVIGDGARRLSDPGPRAILAALNAGRSQSPPVPP
KRNRSAQVHRRPTQNNEEKFNQDNIYEATLPAAYPAASKTATAGKEQDVPLIRPCQSGAE
VAPSAGDVPPAVPPRMPIMHTTPMVAMMPVHRGVLLPQPTPEERRNLRPLSSSSSSTSGP
GPQTTPPPLLPKTDPGRLSSVSMQALTRIKEGEANEGDKTDGGVEPRPVRSGSLRKMTSF
SWESRLQDEPLYQTYRASVITKEIRRQTVCRNVSKTSVDYAMDRAPRRSGAENAASAAAG
GSPKGVATAAPSQCTLWQDQPQVLESGVLEKLTPEQCKYQESMFEVLTSEASYLRSLRVL
IEHFMNSRELEETMIIRDRKTLFSNILRIREVSERFLKDLDQHISQEVVFQDICDIIHYH
AQHNFPAYIDYVRNQIYQDKTYSSLLKNNPSFATVIARLQESPQCQRLPFMSFLLLPFQR
ITRIKMLLENILRRTKEKTAEEETASKALTSVSKIIDECNTQVGKMRQMEELYHVSQTLE
FDKLKAVPLISQTRYLEKKGELQEMSKGGTIFNMRPKFNPVYLFLFNDLLIIAAKKGTER
FVVLDYAHRSLVQVLSAVESGVAAVGSLEHCFNLTLLENHQGRMMERLLRAPSQSDMHRW
MAAFPNPTNPDQHEEEVIYEDWDCPQVQCVEQYVAQQADELALEPTDIVNVTRKTEGCYE
GIRLSDGQKGWFPAANVMEITNEHVRRRNLRERYRVMQAASVVASNKANTSH
NT seq
3039 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtccaggagacgccgcgggcgtccacgtctccgggccccctcaaaccggagatc
cctcaaaaaccgtccccgagaaccgtcccctctcccccggggggagacggcgggaaggtg
aagatgatcgtgaagaagttcagcaaaacggacctgagagaagcaccggggcagcggccc
gccgccaatggcgcggcggaggcgtcgcagataaagcgctccgggaggccgcccacggta
aagcccaagccgaggctgccgctcgggggggcgacggcgcccccgctgcccgcgaagagg
aggcggaccggacagaggcaggcgaaggaggaggggggagacgagggtgacggcaaccag
gtggaaggaggtcgttcagcgcctgacggaaaagaagtggaggtgcggctagtcggaggc
ggcgaggcggaggcggagcacactcacactcccctcagtccgtgctgcgacccgggctgc
agctgcgtgtgccacctccagcagcctgggatgatactgatatgggtgcccgtggacacg
aatggtggcgaggaggagcaggaggaggaggaggaggaggaggaggagcaggaggagcag
gaggaggaggaggaggaggagggaggagacgagggtgagccctgtgcgatagagatcagt
gtggaggacgaggagctctcaaaggaggacggcgaggtaacggcggggggcggcgaggac
agcaagccggagtacgagctggtcgaccagcgggaagagtggaaacaaaaaaaggaaaag
ttccaccaggccttggacgttgtgatcggcgacggcgccaggcggctctcggacccgggc
ccccgcgccatcctcgccgctctcaacgccggccgctctcagtccccccctgttccgccg
aagcggaaccggtcggcccaagtccaccgccggcccacgcagaacaacgaggagaaattc
aaccaggacaacatctacgaggccacgctgccggcagcctaccccgctgccagcaagacc
gccacggcgggcaaggagcaggatgttccactcatcaggccgtgccagtcgggggcggaa
gtcgccccgagcgcgggcgacgtgccgcccgccgtcccgccgaggatgcccatcatgcac
acgactcccatggtggccatgatgcccgtgcaccggggcgtcctgctgccccagcccacg
ccggaggagcggcgcaacctgcggcccttgtcctccagcagcagctcgaccagcgggccg
ggcccccagacgacccccccgcctttgctgcccaagacggatcccgggaggctcagcagt
gtctccatgcaggcgctcacgcggatcaaagagggagaagcgaatgaaggggataagacg
gatggaggcgtagaaccgcgtccagtcaggagcggctccctcaggaagatgacttcgttc
agctgggagtcccggctgcaggacgaacctctgtaccagacgtaccgcgcatccgtcatc
accaaggagatccgacgccagacggtgtgccgcaacgtcagcaaaaccagcgtggactac
gccatggacagggcgccgcgtcgctccggggcagagaacgccgcctccgccgccgccggc
gggtcaccgaagggcgtcgccaccgccgcgccgagccagtgcaccctgtggcaggaccaa
ccgcaggtgctggagtcgggggttctggagaagctcactcctgagcagtgcaagtaccag
gagagtatgtttgaggttttgacatccgaggcctcttaccttcgatccctgcgggtcctg
atcgagcacttcatgaacagccgggagctggaggagacgatgatcatcagagacaggaaa
acgctgttctccaacatcctgaggatccgagaggtcagcgagaggttcttgaaggacctg
gatcaacacatatcccaggaagtggtcttccaggacatctgcgacatcatccactaccac
gcccagcacaacttcccggcctacatcgattacgtccgcaaccagatctaccaggataag
acctactcctcgctcttgaagaacaacccatccttcgccacggtcatcgcccgtctccag
gagtcgcctcagtgccagcggcttcccttcatgtccttcctcctgctgcccttccagcgc
ataacccgcatcaaaatgctcctggagaacatcctgaggagaaccaaggagaagacggct
gaggaggagacggcctcgaaggctttgacttcggtgtcgaagatcatcgacgagtgcaac
acgcaggtggggaagatgagacagatggaggagctgtaccatgtctctcaaacactggag
tttgacaagctgaaggccgtcccgctcatctcccagacgcgatacctggagaagaaaggg
gagctgcaggaaatgtccaaaggaggaaccatcttcaacatgaggccaaagttcaacccc
gtctacctcttcctcttcaatgacctgctcatcatcgctgctaagaaaggcacggagcgt
tttgtggtgctggactacgcccaccgctctctggtgcaggtgctttcggcggttgaaagc
ggggtcgccgccgtcggctccctagagcactgcttcaacctcaccctgctggagaaccac
cagggacgcatgatggagaggctgctcagagctccctcccagtccgacatgcacagatgg
atggcggctttcccgaacccgaccaacccagaccaacatgaagaagaagtgatttatgag
gactgggattgtcctcaggtgcagtgcgtggagcagtacgtcgcccagcaggcggacgag
ctcgccctggagcccactgacatcgtcaacgtcacccgcaaaaccgagggctgttacgaa
ggcattcgcctgtcagacggtcagaagggctggttcccagcagccaacgtcatggagatc
accaacgagcacgtgaggcggcgaaacctccgggagcgctaccgggtcatgcaggcggcg
agcgtggtcgccagcaacaaggccaacacctcgcattag
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