Pungitius pungitius (ninespine stickleback): 119222428
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Entry
119222428 CDS
T07626
Symbol
usp11
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 11 isoform X1
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119222428 (usp11)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119222428 (usp11)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119222428 (usp11)
Peptidases and inhibitors [BR:
ppug01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
119222428 (usp11)
Ubiquitin system [BR:
ppug04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119222428 (usp11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
DUSP
Ubiquitin_3
UCH_1
USP7_C2
zf-MIZ
RNA_pol_Rpb5_N
Motif
Other DBs
NCBI-GeneID:
119222428
NCBI-ProteinID:
XP_037334973
LinkDB
All DBs
Position
1:13791065..13799248
Genome browser
AA seq
1007 aa
AA seq
DB search
MTANSRCSAAEPPGLETQRREIESLLRECELRAGDSWYVMERRWYEQWKEFVETGDQNSS
SFPGQINNAELFEDLDSFHLKERLVENEDFMLVPADAWHRLLGWYGAVEGQPALERKVVD
LPSTLKVEVYPVEIFLCLHSNMENVITAQFSRTDSILSIQRAMCDAFKVPPGSECRLWMK
SSDSSCERLRNVHVSVLDACLSSAMTVIMETRNADGTWPSSRPQIMRNSLEDQDSYRGQP
GVCGLTNLGNTCFMNSALQCLSNTPPLTEYFLLSSYLEELNFTNPLGMKGEIAEAYADVI
KQMWSGRHYSVVPRVFKTKVGHFASQFLGYQQHDSQELLSFLLDGLHEDLNRVKNKEYIE
LRDAEGRPDQEVAEEAWRNHRRRNDSVIVDTFHGLFKSTLVCPECHKVSVTFDPFCYLSV
PLPVSKERVMEVFFVSLDPHAKPAQHRVVVPKAGTVLDLCAALSEMTGVPSSQMVVADVF
NHRFYKIYNSNECLSCILDRDDIFVYELSVLEQQQEEEARGEEVLLALYLRERSHYRDYG
SGSSSYGTSLFGHPLLLRVPRGRCSREELYTLFLQRLARYVRPPDPSEELEEEEEEEGEE
EEELYQSQTNGISDEEQEDAEKAGPSQTQRWCGDSPANGQSDETAVNHTPPTLVDGDTEP
KRPTEPISTSTTSPPSTTSCTDVGYPSGDASGSNEPPADQPHPPSDTTEEEKEDDKQEEA
CSPSPPPNEQPAKRKACCRRRRSLFTIQAVNSNGTTERGTGEGGSAVSFSSQPYVAIDWD
PDMKKRFYNENEAEKYVKHSSMEVPQQQTTVQLQECIELFTTVETLEEENPWYCPVCKKH
QLATKKLDLWCLPEVLIIHLKRFSYTKFTREKLDSIVDFPLRDLDFSGCLLRKSLSNGEP
PSCYDLIAVSNHYGGLRDGHYTSYAQNKDNGQWYYFDDSKVTFAREDQIVTNAAYVLFYH
RQDQIRKPTLPPPSLSPAAANDITSCKEEEAELAASSSSSSVTMETD
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaacagccgctgttctgccgccgagcctccgggcctggagacccagcggcgg
gagatcgagtctctgctgcgggagtgtgagctccgcgctggggacagttggtacgtgatg
gagcggcgctggtatgagcagtggaaggagtttgtggagacgggagaccagaactcgtct
tcttttcccggtcagatcaacaacgctgagctgtttgaggacctggactcgttccacctg
aaggagcgcctggtggagaacgaggacttcatgctggtgccggccgacgcctggcaccgc
ctgctgggctggtacggcgccgtggaggggcaaccggcgctggagcgcaaggtggtggac
ctgcccagcactctgaaggtggaggtctaccccgtcgagatcttcctctgcctccacagc
aacatggagaacgtcataacggcccagttcagccgcactgacagcatactctccatccag
agggcgatgtgcgatgccttcaaagtgcctccgggatcagagtgccgtctgtggatgaag
agttctgacagcagctgtgagcgtctgagaaacgtgcacgtgagcgtgctggatgcctgt
ctgagctcagccatgacggtgatcatggagacgaggaatgcagacggcacctggcccagc
tccagacctcagatcatgaggaactcactggaggatcaggactcgtatcgaggacagccg
ggggtctgtggcctcaccaacctgggcaacacctgcttcatgaactctgctctgcagtgt
ctgagcaacacgccacctctgacggagtacttcctgctgagctcctacctggaggagctg
aacttcaccaacccgctgggcatgaagggcgagatcgccgaggcctacgccgacgtcatc
aagcagatgtggtccggcaggcattactcggtggtgccgcgcgtcttcaagacgaaggtg
ggccactttgcgtcccagttcctgggctaccagcagcacgacagccaggagctgctgtcc
ttcctgctggacggactccacgaggacctcaaccgggtcaagaacaaagagtacatcgag
ctgagggacgccgaggggcgaccggaccaggaagtggctgaggaggcgtggcgtaaccac
cgccgacggaacgactctgtgatcgtcgacacgtttcacggcctcttcaagtccacgctc
gtctgtccggagtgccacaaggtgtccgtgacctttgaccccttctgctacctgagcgtc
ccgcttcctgtcagcaaggagcgcgtgatggaggtcttctttgtgtctctggacccgcat
gccaagccggctcagcatcgcgtcgtggttcctaaagcaggaaccgttttggacctctgt
gctgctctgtcagagatgaccggcgttccttcatcacagatggttgtagctgacgtcttc
aaccaccgcttctataagatctacaactccaatgaatgtctgagctgcattctggaccga
gacgacatctttgtgtacgagctcagcgtgctggagcagcagcaggaggaggaggcgcgg
ggggaggaggtgctgctggcgctctacctgagggagcgatcccactacagagactacggc
tccgggagcagctcgtatgggacgtccctgttcggacaccccctgctgctccgtgtgccg
cgaggccgctgcagccgggaggagctctacacgctgttcctgcagaggctggcgcgctat
gtgcgacctcccgatccctctgaggagttggaagaggaggaagaggaggaaggagaggag
gaagaggagctctatcagagtcagaccaacggcatcagtgacgaggagcaggaggatgct
gagaaagcagggccgtctcaaacgcaacgctggtgcggcgactcgccggcaaacggccaa
tcagacgagacagccgtcaaccacacaccacccactttggtggacggtgatacggagccc
aagaggccgactgagcccatcagcaccagcaccaccagcccccccagcaccaccagctgc
actgacgtgggttaccccagcggggacgcgagcggatccaacgagccgccggcagaccaa
cctcatccgccaagcgacaccacagaagaagaaaaagaagacgacaagcaggaagaggcg
tgttccccgagcccaccgcccaatgagcagccggcaaagaggaaggcgtgttgccgaagg
aggcggagtctgttcaccatccaggctgtgaactccaacgggaccacggagagagggacg
ggggagggggggagcgccgtgtccttcagctctcagccctacgtggccatcgactgggac
ccggacatgaagaagagattctacaacgagaacgaggccgagaagtacgtgaagcacagc
agcatggaggttcctcagcagcagaccacagtgcagctgcaggagtgcatcgagctcttc
accactgtggagacactggaggaggagaacccatggtactgtcctgtgtgtaagaagcac
cagctggccaccaagaagctggacctctggtgtctgcctgaggtcctcatcatccacctc
aagaggttctcctacacgaagttcaccagagagaagctagacagcatcgtggacttcccc
ctcagggatctggacttctccgggtgcctcctgaggaagagtctgtccaatggggagcct
ccgagctgctatgacctcatcgctgtgtccaatcactatggagggctcagagacggccac
tacaccagctatgcgcagaacaaggacaacggtcagtggtactacttcgacgacagcaag
gtgaccttcgcccgggaggaccagatcgtgaccaacgccgcctacgtcctgttctaccat
cgacaagaccagatcaggaagcccaccctgcccccccccagcctgagccccgccgcagcc
aacgacatcacctcctgcaaggaggaagaagcggagctggccgcctcctcctcctcgtcc
tccgttaccatggagacggactaa
DBGET
integrated database retrieval system
