Pungitius pungitius (ninespine stickleback): 119222487
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Entry
119222487 CDS
T07626
Symbol
taf11
Name
(RefSeq) transcription initiation factor TFIID subunit 11
KO
K03135
transcription initiation factor TFIID subunit 11
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
119222487 (taf11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ppug03021
]
119222487 (taf11)
Transcription machinery [BR:
ppug03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
119222487 (taf11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAFII28
CBFD_NFYB_HMF
GMT-wHTH
Motif
Other DBs
NCBI-GeneID:
119222487
NCBI-ProteinID:
XP_037335093
LinkDB
All DBs
Position
1:complement(17670915..17673523)
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AA seq
204 aa
AA seq
DB search
MADPARIKPEVKPERTTSANEDHPKPEAAEDGPAASKPADVNKESSSQDQVKQEEKSDVA
AEEDEEEGTSDQASKRLKLEPEKKKERRQKVDEDEIQKMQVLVSSFSEEQLNRYEMYRRS
AFPKAAIKRLIQSITGSSVSQNVVIAMSGISKVFAGEIVEEALDVCEKWGETPPLQPKHM
REAVRRLKSRAQIPNTKYKQILFQ
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccctgcacgcatcaagcccgaggttaaacccgagagaacgacctctgccaac
gaggaccatccgaaaccagaggccgctgaggatggacctgccgcgtctaaacccgcggac
gtaaacaaagagtcctcctcgcaagatcaggtcaaacaggaggagaaatctgatgtggca
gccgaggaagatgaggaagagggaacctccgaccaagcctccaaaaggctgaagctggaa
ccagagaagaaaaaggagaggcgccaaaaggtcgacgaggatgaaatacaaaagatgcaa
gttttggtgtcctccttttctgaagagcagctaaatcgctatgagatgtacagacgctct
gcctttccaaaggcggcaatcaagaggctgatccagtccataacaggatcatcagtgtca
cagaacgtggtgatcgccatgtctggtatttccaaggtgtttgccggtgaaattgttgag
gaagcattggacgtttgtgagaagtggggagaaaccccaccgcttcagcccaagcatatg
agggaggcggtgaggaggctgaagagccgagctcagatccccaataccaagtataagcaa
atcctcttccagtga
DBGET
integrated database retrieval system
