Pungitius pungitius (ninespine stickleback): 119222513
Help
Entry
119222513 CDS
T07626
Name
(RefSeq) neural cell adhesion molecule L1.1-like isoform X1
KO
K06550
L1 cell adhesion molecule
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04514
Cell adhesion molecule (CAM) interaction
ppug04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
119222513
04517 IgSF CAM signaling
119222513
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119222513
04090 CD molecules [BR:
ppug04090
]
119222513
04091 Lectins [BR:
ppug04091
]
119222513
Cell adhesion molecules [BR:
ppug04515
]
Immunoglobulin superfamily
L1 family
119222513
CD molecules [BR:
ppug04090
]
Proteins
119222513
Lectins [BR:
ppug04091
]
I-type lectins (Siglecs)
119222513
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_VEGFR-1-like_5th
FN3_DSCAM-DSCAML_C
Pur_ac_phosph_N
C2-set_2
Syndecan
Motif
Other DBs
NCBI-GeneID:
119222513
NCBI-ProteinID:
XP_037335134
LinkDB
All DBs
Position
1:13915682..13942799
Genome browser
AA seq
1285 aa
AA seq
DB search
MCVSQRRGRSSPGLHLILLPLLLPLSFLSSIAQGAIDIPQNYKVQNILQPPILKVTPKSH
TAFSLEDIQLPCEASGTPTPTFRWVKDGEAFGPERPAYGTLRAEDEEPLASYGGFYRCYA
SNTLGTAVTQSVQVIVEAQPVLLKQQRVHKRAHEGESIILSCNPPQSSTPPFIHWMDKRM
VHIKQSDRVMVGLDGNLYFSNLLGTDSRDDYICNAQYAAARTVLPHTAVMLTVSPNNDVI
HARKPHLFRPIGSHTSVLALKQQSVTLECIPKGLPTPKVEWKKKDGSLEETGGRVEAHGR
WLHFDSVAQGDDGEYECRAFNAHGSTAHSFSLTVEASPFWVKEPQNLLYSPGETVRLDCQ
AEGIPTPLLTWSLNGEPLTEVDEDPRRSVSDGVLILRDVEFADTAVYQCEAYNKHGSILL
NTYLYVVELPPQILSSDGLVYRVTEGGDVVLHCESFGSPRPHVTWEGEERPPLLSDPRIA
LLTNGSITLSGVSHEDDGEYTCSIKHTNISISAHLKVYNRTVMLTGPQHVRALRGTSALL
DCDFYKDRELHQYQIVWRKDTQKLQESSPDDKYTFFENGTLKVSNIQSEDSAYYSCEVFT
DLDQVKASGSITVVARPDAPRDLSLSDATDHSVTLSWTPGNSHNSPITEFLVEVREEQHT
EEGGWSWARMRRVPGDFDHVELSLDPYCTFRFRVIAINDVGHSDPSRPSERHNTPPAVPT
MNPGGVRSESIDPKTLVITWEEMDKRQHNGQGFQYKVLWRRAGGTDVRWNHADVAAPPFL
VNDTGTYEPFEIKVQAVNSLGEGPAPQSKVGHSGEEEPEEAPSGVSTSVVNSTVRVQWNE
AQNVRGLLLGYKIYFQWTGPRGGRVGRSLRRQKEREGRAERARERDTLRRPQVVVVNSTT
TWREVTGLQLYSQYQLSVTAFNSKGEGPHSSPHHFSTPEGAPGPPASLRFESPSEKSLIL
YWTPPEDTNGVLLGYIVQYQQEVESKDSLWKMETIRDPGVTHSELDHLDPSSHYIFKVIA
RTAAGDGPPIMLRAATLLEGVPPSHISIVSGNTSLNLSWVPGERDRNHGFVIRYLRKSPG
CDWMDSEVVNSTQGFYSLTGLQPGSNYHLMIKHGNDTQWENMTWTIGPVPSVMPGGFAAR
GWLIGLISAILLLVLILLIICLMKRSKGGKYAVKDKEEKEVESEARPMKDETFGEYRSLE
SDADEKRSGSDASLNESKLGSDDSLAEYGDSVDIQFNEDGSFIGQYSNRGPVPHGNESSG
PASPVNAAPPPPAAPSMTSVLNRPI
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgtgtcacagcgtagggggcggagctcccccggcctgcacctgatcctcctcccc
ctcctcctccctctgtccttcctctcctccatcgctcagggagccatcgacatcccccaa
aactacaaagtgcagaacatattgcagcctccgatcctgaaggtgacgcccaagtcgcac
acagccttctcactggaggacatccagctgccctgcgaggcctccgggaccccgaccccg
accttccgctgggtgaaggacggcgaggcgttcggcccggagcgtccggcttacgggacg
ctgcgagccgaggacgaggagccgctggcctcgtacggggggttctaccgctgctacgcc
tccaacacgctgggcaccgccgtgacccagagcgtccaggtcatcgtggaggctcagccg
gttcttctgaaacagcaaagagtacataagagagcccacgagggcgagagcatcatcctg
tcctgcaaccccccccagagctccacccccccgttcatccactggatggacaaaaggatg
gtgcacatcaagcagagtgaccgggtgatggtcggcctggacgggaacttgtacttctcc
aacctgctggggaccgacagcagggacgactacatctgcaacgcccagtacgcggcggcc
aggacggtcctgccccacacggccgtgatgctcaccgtctcacccaataatgacgtcatc
catgccaggaaaccccacctcttccgtcccattggctcccacacctctgtgttggccctc
aagcaacagagcgtcaccctagaatgtatccccaagggcctacccacgccgaaggtggaa
tggaagaagaaggacggcagcctggaggagaccggtggtcgggtggaggcacacggccgc
tggctccacttcgacagcgtcgcccagggcgacgacggcgagtacgaatgccgggccttc
aacgcccacggctccacggcgcactccttcagcctcaccgtggaagcctctccattctgg
gtgaaggagcctcagaatctgctctactcacccggggagacggtgcgactggattgtcag
gccgaaggcatcccaacccccctcctcacctggagcctcaacggggagccgctcacagag
gtggacgaggaccctcggcgcagcgtgtcggatggtgttctgatactgagggacgtggag
ttcgccgacaccgctgtgtaccagtgcgaggcttacaacaagcacggctccatcctgctc
aacacctacctctacgtcgtggagctcccccctcagatcctgtcctctgacggactggtg
taccgggtcaccgagggcggagacgtggtgctgcactgcgagtccttcggctcgccgcga
cctcacgtcacatgggagggcgaggagaggcctcctctgctgtcggaccctcgcatcgct
ctgctgaccaacggctccatcacgctgtcgggcgtgagccacgaagacgacggagagtac
acctgctccatcaaacacaccaacatctccatctcagcccacctgaaagtctacaatcgc
accgtgatgctcactggtcctcagcacgtgcgcgccctcagaggaaccagcgccctgctg
gactgtgacttctacaaagaccgcgagctgcaccagtaccagatcgtatggaggaaggac
acgcagaagctgcaggagtcgtctccggatgacaagtacacattctttgagaatggcacc
ttgaaagtgtccaacatccaatcagaagacagcgcgtactattcctgtgaggtcttcact
gacctggaccaagtgaaggccagcggctccatcactgtcgtagctcgaccggacgccccc
agagatctgtctctgtccgatgctaccgaccacagcgtcactctcagctggactccagga
aactcccacaacagccccatcacagagttcctagtggaggtgcgggaggagcagcacacc
gaggagggtgggtggagctgggcgaggatgaggagggtccccggggactttgaccacgtc
gagttgtccctcgacccgtactgcaccttccgcttcagggtcatcgccatcaacgacgtc
ggccacagcgaccccagccggccctcggagcgccacaacacgccgccggccgtccctacg
atgaacccgggcggagtgcgcagcgagtccatcgacccgaagaccctcgtcatcacgtgg
gaggagatggacaagcggcagcacaacggccagggcttccagtacaaggtgctgtggcgg
cgcgccggtggcaccgacgtccgctggaaccacgcagacgtggcggcgcctccgttcctg
gtgaacgacaccgggacctacgagcccttcgagatcaaagtgcaggccgtcaactcgctg
ggggaggggccggcgccgcagtcgaaggtcggccactcgggggaggaagagccggaggaa
gctccctctggagtgtccacctcggtggtgaacagcacagtcagagtccagtggaacgaa
gcccagaacgtccgaggtcttcttctgggatacaagatctacttccagtggacgggtcct
cgaggcggtcgagtcgggaggtctctgcgccggcagaaggagagagagggccgggcggag
cgggcgagggagagggacacgctgaggaggccgcaggtggtggtggtcaacagcaccacc
acctggcgggaggtgacggggctgcagctgtattcccaataccagctgtccgtcaccgcc
ttcaacagcaaaggggagggcccccactcgtccccccaccacttcagcaccccagaggga
gctcctggtcctccagcgtccttgaggtttgagagtccctcggagaagtcccttatcctc
tactggacccccccggaggacaccaacggcgtcctgctgggatacatcgtccagtaccaa
caggaggtggagagcaaagacagcctgtggaagatggagaccatcagggaccccggggtg
actcacagcgagctggaccatctggaccccagcagccattacatcttcaaggtcatcgct
cgcaccgccgccggagatggtccccccatcatgctgagggccgccaccctgctggaagga
gttcctccgtcccacatcagcatcgtctccggcaacacatcgctcaacctgagctgggtc
cccggagagcgggacaggaaccacggctttgtcatccgctacctcaggaagagtcccggc
tgcgactggatggactcggaagtggtgaactccacgcagggtttctattcgctgactggg
ctccagcccgggtccaactaccacctcatgatcaaacacgggaacgacactcagtgggaa
aacatgacgtggaccatcggaccggtgccctcggtgatgcccggcgggttcgcagctcgg
ggctggttgatcggactcatcagcgccatcctgctgctagtgctgatcctgctcattatc
tgcctcatgaagcgcagtaaaggtggcaaatacgcagtgaaggataaagaagaaaaggaa
gtggagtctgaagctcggcccatgaaggacgagacctttggagagtacaggtctctggag
agcgatgcggacgagaagcgctccggcagcgacgcctccctgaacgagagcaagctgggc
agcgacgactctctggccgagtacggggacagcgtggacatccagttcaacgaggacggc
tccttcatcggccagtacagcaaccgggggcccgtaccccacggcaacgagagctcaggc
cccgcctcccccgtcaacgcagccccgcctccccccgccgccccgtccatgacgagcgtc
ctcaaccggcccatctag
DBGET
integrated database retrieval system
