Pungitius pungitius (ninespine stickleback): 119222517
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Entry
119222517 CDS
T07626
Symbol
rfc2
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03030
DNA replication
ppug03410
Base excision repair
ppug03420
Nucleotide excision repair
ppug03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
119222517 (rfc2)
03410 Base excision repair
119222517 (rfc2)
03420 Nucleotide excision repair
119222517 (rfc2)
03430 Mismatch repair
119222517 (rfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppug03032
]
119222517 (rfc2)
03036 Chromosome and associated proteins [BR:
ppug03036
]
119222517 (rfc2)
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119222517 (rfc2)
DNA replication proteins [BR:
ppug03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
119222517 (rfc2)
DNA Replication Termination Factors
ELG1-RFC complex
119222517 (rfc2)
Chromosome and associated proteins [BR:
ppug03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
119222517 (rfc2)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
119222517 (rfc2)
Check point factors
HRAD17(Rad24)-RFC complex
119222517 (rfc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
nSTAND_NTPase5
AAA_22
AAA_14
AAA_lid_RFC1
AAA_16
RCF1-5-like_lid
Viral_helicase1
Mg_chelatase
AAA_11
Rad17
DEAD
nSTAND3
RuvB_N
AAA_19
AAA_assoc_2
MipZ
AAA_5
AAA_30
AAA_18
ABC_tran
MeaB
RNA_helicase
SLFN-g3_helicase
DNAX_ATPase_lid
AAA_25
AAA_28
AAA_24
AAA_23
NTPase_1
AAA_2
MCM
AMP-binding_C_3
FtsK_SpoIIIE
DUF815
IstB_IS21
AAA_3
ATPase_2
Motif
Other DBs
NCBI-GeneID:
119222517
NCBI-ProteinID:
XP_037335142
LinkDB
All DBs
Position
1:complement(13787783..13790458)
Genome browser
AA seq
346 aa
AA seq
DB search
MAEVEMADAADTGAEEASTKSSGGHHELPWVEKYRPLKLSDVIGNEETVSRLEVFAREGN
VPNVIIAGPPGTGKTTSILCLARALLGSSMKDAVLELNASNERGIDVVRNKIKMFAQQKV
TLPKGRHKIVILDEADSMTDGAQQALRRIMEIYSKTTRFALACNASDKIIEPIQSRCAVL
RYSKLTDGQVLARLQDVVEQERLAVSDDGLEAVIFTAQGDMRQALNNLQSTNSGFGYVNS
ENVFKVCDEPHPLLVKSMLGHCVEGDIEQAYKVVEQLWALGYSPEDIIGNIFRVCKTYQM
AEYLKLDFIKEIGYTHMRVAEGVNSLLQMAGLLGRLCSKTAPPAAS
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggtggagatggcggacgcggcagacacgggagccgaagaggcctccaccaag
agctccggtggccatcacgagctgccctgggtggagaagtaccggccgctgaagctcagt
gacgtcattgggaacgaagagacggtgagccggctcgaggtgttcgcacgcgaggggaac
gtgcccaacgtcatcatcgcaggtcctccaggaacagggaagaccaccagcatcctgtgc
ctggcccgagcgctgctgggatcctccatgaaggacgccgtgctggagctcaacgcttcc
aacgagagggggatcgacgtggtgaggaacaagatcaagatgttcgctcagcagaaagtc
acgctgcccaaaggacgccataagatcgtcatcctggacgaagccgacagcatgactgac
ggtgcccagcaggcgctgaggaggatcatggagatctactccaagaccacgcgcttcgcc
ctggcctgcaacgcctcggataagatcatcgagcccatccaatcgcgctgcgccgtgctg
cgctactccaagctgacggacggacaggtgctggcgaggctgcaggacgtcgtggagcag
gagcgcctggccgtgtccgacgacgggcttgaagccgtcatcttcaccgcgcagggagac
atgagacaggctctgaacaacctgcagtccaccaactccggcttcggttacgtcaacagt
gaaaacgtcttcaaagtgtgcgatgagccccacccgctgctggtgaaaagcatgctggga
cattgcgtagagggcgacatcgagcaggcttacaaggtggtggagcagctgtgggcgctg
ggctactctccagaggacatcatcgggaacatcttcagggtctgcaagacctaccagatg
gctgagtacctcaagctggactttatcaaggagattgggtacactcacatgcgtgtggct
gaaggagtgaactctctgctgcagatggctggtctgctcggtcggctctgcagtaagacg
gcgccccctgcagccagctga
DBGET
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