Pungitius pungitius (ninespine stickleback): 119222564
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Entry
119222564 CDS
T07626
Symbol
hoxc11a
Name
(RefSeq) LOW QUALITY PROTEIN: homeobox protein Hox-C11a
KO
K09296
homeobox protein HoxC/D11
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119222564 (hoxc11a)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
119222564 (hoxc11a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3528
Homeodomain
Homeobox_KN
Trypan_PARP
Motif
Other DBs
NCBI-GeneID:
119222564
NCBI-ProteinID:
XP_037335208
LinkDB
All DBs
Position
1:complement(31301162..31304205)
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AA seq
366 aa
AA seq
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MTISTFDHVSAGRLRRIARHLAFPNSTLLLQHVSKTSIYSSEYXRERKMFNSVNLGNFCS
QTRKDRTSEFGDRTGCASNIYLPSCTYYVPEFSAVSSFLPQAPSRQISYPYSTNLSQVQP
VREVSYGLDPTSKWHHRSNYASCYSGEDLVHRDCLPPSTMTEMLMKNESVYSHHHHHHHS
HPGSNHPATGFYSGVGKNSVLPQGFDRFFETAYCSSTDNQSDSCLQKGEGGKLESDAQQQ
QQQQPVASLAGAPEQEKDPEDEEEHTNSGSCTSSSTTTKDGTANKSSHSTTPRTRKKRCP
YSKFQIRELEREFFFNVYINKEKRLQLSRMLNLTDRQVKIWFQNRRMKEKKLSRDRLQYF
SGNPLL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgacaatatctactttcgatcacgtgtctgcggggcgacttagacggattgcgcgtcat
ctcgccttcccaaattccacccttctgctgcagcacgtatccaaaacatctatctatagt
tcggagtacnngagagagagaaagatgtttaactcggtgaatctgggcaacttctgctcc
cagacgcgcaaagaccggacatccgagtttggggacaggacaggctgcgcgtccaacatt
tatctccccagctgcacctactacgtccccgagttttctgccgtctcctcgtttcttcca
caggccccgtcccggcaaatcagctacccttattccacaaatctgtctcaagtgcagccg
gtacgggaagtttcatacggcttggaccctaccagtaaatggcaccacagaagcaattat
gcatcgtgctactccggagaagatctggtgcatagggactgtcttccgccatccaccatg
acagaaatgcttatgaagaacgagagcgtgtacagccaccaccaccatcaccatcacagc
catccgggctccaatcaccccgccacaggtttttactccggggtggggaaaaacagcgtc
cttccgcaaggtttcgaccgctttttcgagaccgcatactgcagcagcacggacaatcag
tcagacagttgtttacaaaagggcgagggaggaaagctggaaagcgacgctcagcagcag
cagcagcagcagcccgtagcctccttagccggagctccggagcaggaaaaagacccagaa
gatgaggaggaacatacaaattctggctcgtgcacttcttcttccacaaccaccaaggac
ggcaccgccaacaagagcagccactcgaccactccccgcacgcggaagaagaggtgtcca
tattccaagtttcagattcgggagctggagcgggagttcttcttcaacgtttacatcaac
aaagagaaaaggcttcagctttcgcgaatgttaaacctcaccgaccgccaagttaaaatt
tggtttcagaatagaagaatgaaagagaagaagctgagcagagatcgcctgcagtacttc
tctgggaaccccctgttgtga
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