Pungitius pungitius (ninespine stickleback): 119222569
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Entry
119222569 CDS
T07626
Symbol
sorcs2
Name
(RefSeq) VPS10 domain-containing receptor SorCS2 isoform X1
KO
K27082
VPS10 domain-containing receptor SorCS2
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119222569 (sorcs2)
Membrane trafficking [BR:
ppug04131
]
Protein recycling
Others
Others
119222569 (sorcs2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
InlK_D3
BiPBP_C
DUF2769
Motif
Other DBs
NCBI-GeneID:
119222569
NCBI-ProteinID:
XP_037335214
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All DBs
Position
1:complement(12302359..12363523)
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AA seq
1143 aa
AA seq
DB search
MAFLRAEEPLSATAYLCGFLLITSAWVVVPGPVLCDSGGLNRRGVEHRTLDMGGGDRRSL
SGLATDPDEQAVAEESSPRFRRELSREKQMSLHSSSFVLKGDATHNQAMVHWTGENSSVI
LILTKYYHADSTKVLESSLWRSADYGTTYTKLNLMPGTTIVVTSFYICPNNKKKVVLVGS
STNERDQMLFISTDEGSSFQRLSISFMPDTLIFHPKEEDKLLAYCKDGRLFASMDLGRTW
TLLQERVNKDKFFWSVSDVDMDPDLVHMEMQDTSGGHLYVTCLIQNCSDKMVKAQFLGKI
DHNSLLVKDDYIFVKVTSGNPTKHFVSYRRNEFVQMRFPKYALPKDVQIVSTDGNQVFLA
LQEWYQSDTYNLYQSDPQGIYYSIVLENVRSTKQPEENVLLDILEVRGIKGVFLANQKIN
GKVTTLITYNKGQNWEPLVPPTTDMNGKPLSCKAPDCHLHLHLRWADNPYVSGTVHTKDS
APGLIMGAGNLGSKLVEYKEEMYITSDCGKTWRQVFEEEHHILYLDHGGVIVAIKDTSIP
LKILKFSIDEGRTWTIHNFTSTSVFVDGLLSEPGDETLVMTVFGHISYRSDWELVKVDFR
QSFSHQCTESEYELWKLTDLQGEKCIMGLERSFRKRKDTAFCVKGKSYTSALDTKPCQCT
DRDFNCDYGFERSPTEGNHCLADFWHDPDSPPEDCHLRQTYTPSTGYRKVISNMCEGGLN
KQHSIKHHSCPLLPPKGLRVSIKGQMMAVAPGDDITFIVHQDEGDTSSTRYQVDLGDGVW
AIYQNLTVTDEPIQHRYNNPGIYKVTVKAENMAGKDEATMFIQVTAPLQKVHLEVVPITG
RNHEVNLTAIVLPTEANLSVFYWWIGDNQRPTLTLQNSLWTRFPETGEVSVTVQASNGRS
MVQDTRTVRVYDNFQVIPLSFSTSLDNFNPNIPDWREDISQLVTKILVKTTSIPLESLAT
VVKPGLPTTADLYVLPLDREPAKMNTFTDKRIPLIIQAFNGNNVSFVVRGGVRVLVMLAD
PNAGYHATFGSPGFWTLAVTFAISIIATGSFILYKFKSPCLWTEDSFPLLFFRKLPGSRN
VYAQMHNEKEQEMTSPVNHSEATQHIIQGEEFIDDDLDSQTLGSHSGVVLSINSRELHSY
LTS
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggcatttctgcgcgccgaagagccgctctccgccactgcgtacctatgcggctttctg
ttgatcacctcggcctgggtggtcgtgccgggaccagtgctctgtgacagcgggggttta
aaccggcgcggcgtggagcaccgtacgttggacatgggtggcggagacagacgatctttg
tctggcttagccacggatccggacgagcaagccgtcgcggaagagagctcaccccgcttc
aggagagagctgtcccgggaaaaacaaatgagcctgcacagcagctcgttcgttctcaaa
ggggatgcgacccacaaccaggcgatggtccactggacaggagagaacagcagcgtcatc
ctgatcctgaccaagtactatcatgctgattccaccaaagtgctggagagctcactgtgg
aggtctgctgactatggcaccacctacaccaaactcaacctgatgccagggacaactatt
gtggtgaccagcttttatatctgtccaaacaacaaaaaaaaggtagtgctggtaggttca
tccacaaatgaaagggatcagatgctgtttatcagcacagacgaaggttcctcctttcag
cggctgtccatctccttcatgccggacactctcatcttccaccccaaggaagaagacaag
ctcttggcctactgtaaagatggcaggctctttgcttcgatggacctgggccgcacgtgg
actttgcttcaggagcgtgtgaacaaggacaaattcttctggtcagtatctgatgtggat
atggaccctgatctggtgcacatggaaatgcaagacacaagtggaggtcatctgtacgtt
acctgtctcatccaaaactgttcggacaaaatggttaaggctcagtttcttggaaaaata
gaccacaactcactgctggtgaaggacgactacatatttgtcaaggtcacctcagggaat
cctaccaagcactttgtctcctatcggcgcaacgagtttgtccagatgaggtttcccaag
tatgccttgccaaaggatgttcagatagtgagtacagatgggaaccaggtcttcctcgcc
ctccaggagtggtaccagtcagacacatataacttgtaccagtctgatccccagggcatc
tactactccattgtcttggaaaatgttcgcagcaccaagcagccagaggagaatgtcctc
cttgatatacttgaggtgcgtggaataaaaggggtctttcttgccaatcagaagattaat
gggaaagtgacaactctcatcacctataacaaaggacaaaactgggaaccgttggtccca
cctacgactgacatgaacggcaagccactcagctgcaaagcaccggactgtcaccttcac
ctccaccttcgctgggcagacaacccctacgtgtctgggacagtccacaccaaagactca
gctccaggtctcatcatgggtgcaggtaaccttggctccaaactcgtagagtacaaggaa
gagatgtacattacttcagactgcggaaagacatggcgacaggtttttgaggaggagcat
cacattctgtacctagaccatggtggggtaattgttgccatcaaggacacctctattcct
ctcaagatactcaagtttagtattgatgaaggacgaacgtggaccattcacaacttcacc
agcacctctgtgtttgtcgatggtctcctcagtgagccaggagatgagaccctggttatg
actgtgtttgggcacataagctacaggtcagactgggagctggtcaaagtggacttcagg
cagtctttctcccatcagtgtacagagtctgaatatgagctctggaaactcactgacctg
cagggggaaaagtgcattatgggcctggagcgaagtttcaggaaaaggaaggacacagcg
ttctgtgtcaaaggaaagagctacacatcagcgcttgacactaaaccatgtcaatgcaca
gatagagacttcaactgtgactatggttttgaacgatctccaacggaaggcaatcactgc
ttggctgacttctggcatgatccagattcaccacctgaagattgccatctaagacaaacc
tatacgcccagcactggctacaggaaggttatatctaacatgtgtgaaggagggcttaac
aagcagcacagtatcaaacaccacagttgccctcttttgcccccgaaaggactgcgggtc
agcatcaaaggtcagatgatggctgttgctcctggcgatgacatcacattcattgtccac
caggacgagggtgacaccagcagcactcggtaccaggtggacctcggcgacggggtttgg
gccatctaccagaacctgacagtgactgatgagcccatccaacatcgttacaacaatcca
ggcatttacaaagtcactgtgaaggccgagaacatggcagggaaagatgaggccaccatg
ttcatccaggtcacagctcccttgcagaaagtgcacctggaggtggtacccatcactggg
agaaaccatgaggttaacctgacagcaatagtccttcctactgaggccaacctgtctgtc
ttctactggtggattggagataaccagaggcctacactgactctgcagaacagcctttgg
actcgtttcccagagacaggcgaggtttcagtcactgtccaagcttctaatggccggtct
atggtacaggacaccaggacagtccgagtctacgataacttccaggtcatccctctgagt
ttcagcacaagcctggacaacttcaaccccaacattccagattggagagaggacatcagt
cagctggtcaccaaaatacttgttaagaccacaagtattcctttggagtcactggctacg
gtggtgaagccaggcctccccaccactgctgacttgtatgtcctgccactggacagggaa
ccagctaagatgaacacgtttacagataagcgcattccacttatcatacaagccttcaac
ggcaacaatgtcagctttgttgtgcgtggaggtgtacgagtgctggtgatgctagctgac
ccgaacgcgggctaccatgcaacatttggaagtccaggtttttggactctagcagtgact
tttgcaatcagcatcattgccaccggttccttcatcctttacaagttcaaaagtccttgt
ctttggactgaggattcctttcccctgctgtttttcaggaagctcccgggtagccgcaac
gtctacgctcagatgcacaacgagaaggagcaggagatgaccagccctgtcaatcacagc
gaggccacccagcatatcatccagggtgaggagttcattgacgatgacctggactcgcag
actctaggcagtcattccggtgttgtcctgagcatcaactccagagaactccacagttac
ttgaccagctga
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