Pungitius pungitius (ninespine stickleback): 119222599
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Entry
119222599 CDS
T07626
Name
(RefSeq) serine/arginine-rich splicing factor 6-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03040
Spliceosome
ppug05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
119222599
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
119222599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119222599
Spliceosome [BR:
ppug03041
]
Common components
Common spliceosomal components
SR proteins
119222599
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
Nup35_RRM_2
DbpA
Motif
Other DBs
NCBI-GeneID:
119222599
NCBI-ProteinID:
XP_037335267
LinkDB
All DBs
Position
1:complement(26321433..26325934)
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AA seq
389 aa
AA seq
DB search
MPRVYIGRLSYNVREKDIQRFFSGYGKLMEIDLKNGYGFVEFEDNRDADDAVYELNGKEL
CGERVIVENARGPRRDRDGYGGGHLGGGRSSGYSSRSRTGRDKYGPPVRTEYRLIVENLS
SRCSWQDLKDFMRQAGEVTYADAHKERTNEGVIEFRSESDLRRAIDKLDGTDINGRKIRL
VEERPRKRRSYSGSRSRSRSRRSRSRRSSRSRSRSHSRSRSHSNKRRRRSRSGRKSRSKS
GGRKSMSCNRRSRSRSRKSRSRKSLSRSTDRKEKSRSRSPKSRSRSADRKEKSRSRSPRS
RSHSADRKSKSRSKSRSKVKSERDSRSRSKEISVEKTRSHSASPMANGVEQCVAKSPSRS
PSPRGEDRRSMSREKRSASRSRSRSASRD
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtgtttacatcggacgactgagctataatgtccgcgaaaaggacatacagcga
tttttcagcggatatggaaagctcatggagatcgatttgaagaacggctatggcttcgtg
gagttcgaggataaccgggacgccgacgacgccgtgtacgagctgaacggcaaggagctg
tgcggggagcgggtgatcgtggaaaacgcccgcgggccgcggcgagatcgagatggctac
ggtgggggtcacttgggtggtgggcgcagtagcggttacagcagccggagccgcactggc
agggacaagtacggacctccagtccgtactgagtaccgcctcatcgtggagaacttgtcc
agccgctgcagttggcaagacctcaaggacttcatgcgtcaagcaggagaggtgacgtat
gcagatgcccacaaggaacgcacgaatgagggcgtgattgagtttcggtccgagtcggac
ctgaggagggccattgacaagctggatggcaccgacattaatggacggaagattcgtctt
gtggaggaacgacctcgcaaacggagatcttactccggcagccgctccagatctcgaagt
cgtcgcagcaggagccgcaggagctccaggagccgctccagatcccactcaaggtctcgt
tcccatagcaacaagagacgtcgccgctctcgatctggaaggaagtctcgctccaagtcg
ggagggaggaaatcaatgtcttgcaaccgcaggtcccgttctcggtctcgcaaatcacgt
tctcgcaaatcactttctcgctcgactgaccggaaagaaaagtcccgttcacgctccccc
aaatcacgttctcgttcagctgaccgcaaagaaaagtcccgttctcgctcccccagatcc
cgttctcactcggctgaccggaaatcaaagtcccgttcaaagagccgttcaaaggtgaag
tctgagcgggattctcgcagtcgttccaaggagatttctgtcgaaaagacccgcagtcat
tcagcgtccccgatggccaacggcgtggagcagtgtgttgccaagtctccgtcccgctcc
ccatctcctcgaggggaggaccgccgatccatgtccagggaaaagcgttcagcctcacgc
tcacggtctagatcagcctctcgggattag
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