Pungitius pungitius (ninespine stickleback): 119222665
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Entry
119222665 CDS
T07626
Name
(RefSeq) phospholipid-transporting ATPase ABCA1-like
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug02010
ABC transporters
ppug04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
119222665
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
119222665
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ppug02000
]
119222665
Transporters [BR:
ppug02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
119222665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
Motif
Other DBs
NCBI-GeneID:
119222665
NCBI-ProteinID:
XP_037335370
LinkDB
All DBs
Position
1:complement(6218338..6329764)
Genome browser
AA seq
2242 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVVEVVWPLFLFIILVWVRSTNTPVFKGQCHFPNKA
MPSAGVLPWLQGMMCNIDNPCLSDPTPGETPGQVNNFNDSIVSRMLIELQSLLGNGSILS
RARFLAEDLDQWDSVLAKANPGNAQPVILRSVLRDNETFSTHLKENLSMPPAVVQSLMNA
EIKLNPTTGLPRPGDLRSVLCEGTDLDEYIQFSSQAQKEAFQNVSCSRDPQQLINAQQVF
QRNLDGRKVLSAVPAALDLNVTDTVTLIGKTTQDALPVIEEMTRLQNSMIFEAASSLDFQ
KDMIGSINMLLCGKPPNISLSSPTPMDNKTSVSIRSNSSDAFCQTLVETLEGTPGLRYIW
STFKQLLQGKVLYTPDTPAVRLVVKEANSTFNALAMLKELADLWEELGPRVWDTLQNGRQ
VNTLRTLLANPLFAAALNQRLVGTGWTSEALANFLYNGPPADRPHGAAPYDWRDTFNATS
GALKLLSKFLGCLNLNKFEAAPTESRLVSRALQLLENGTFWAAIVFENLQPNSSGLPAYV
KYKIRMDIDDVEPTNKLKDRSWSPGARGNSFNDLRYIWGGFAYLQDMMDHGIIQVQTSKT
QPLGVFAQQMPFPCYVDDSFVQSIGGILPMFLVLAFMYTVCMTIKGLVLEKELRLKEVLR
VVGIQNGALWSATFTENIVLLTVPCALISVMVKYGKVLQYSDPSVIFVFLLVFCLATITQ
CFFISVFFSKANLAAACGGLIYFVLYLPHVLCYAWRDVMGFQAKVAVSLLSCVAFGYGCE
NFAKYEEQGIGIQWYNINTSPEEGGRYTFIVSIVMMLVDAAIYCLLTWYIENVFPGQYGI
PRPWYFPFTASYWCGTASTAAADPAALQNSTEHDEYLEKPSPNMKAGVSVRNLVKIYKTG
KKLAVDGLSMDFYQNQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDILTDMDSI
RKYLGMCPQHNVLFNDLTVEEHIYFYARLKGRSRAEVKIEMDQMIKDVGLPHKRKELAKN
LSGGMQRKLSVAIAFVGGSKVVILDEPTAGVDPYARRGIWELLLKYKQGRTIILSTHHMD
EADILGDRIAIISQGKMRCFGSSLFLKKRFGSGYYLTLVRDGTEKMAAQRGGIIHHEAKE
ERDFSPRSSSPDDGIGSQSWNNTEPSADLAALDQIVRRHVPGAVFLESVGQEITYILPYG
GARDGTFALLFQGLDLAMADLGLTSYGISDTTLEEIFLKVAEDSGVDAEIPTTKEPLVRD
CKRGSGTSKRNSIASVHMKTEQVSGLSDLKEKFTSKVEDLTSNAVVSGKGSTVIAGWKLI
RRQFLALFIKRFHHARRSRKGLVAQVVLPAVFVCLSLIFSLIVPPFSEYPSLELQPWMYM
PQTDFYSNDGPDIVEVSKVVETLVNKPGFGTRCMNGNPIPKLPCSLSGSDWFTPAVDQSV
ADVFINGNWSMSNPSPPCQCSTPARTIMLPDCPRAAGGLPPPQRIQNTTETLLDLTGRNV
TDFLVKTFERSGKTRYGGISVGGVNSQVRLSEAAIKASFRDLKGLFNSSRDNLTDQIFQK
AETLLKKLGTKDNLKVWFYNKAWHGMVSFLNVANNAILRGNLPAGQDPRQYGISVSNHPL
NLTKAQLSSAAFASSSTDVVVSICVIFAMSFIPASFVLFLIQERVNKAKHLQFVSGVNPA
VYWLANFAWDMCNYVIPCLIVIFIFLCFQQKAYVSPPNLPALILLLFFYGWAITPMMYPA
SFIFSVPSTAYVVLTCINLFIGINGSIATFVLELIDDDNVSRINDIVKNVLLIFPHFCLG
RGLIDMAQNQAMATLFSGFGEDRFKDPLSWNMVGKNLCAMSIQGVVMFTITILIQYKFFC
KPRLISGKSLSSEEEEDIDVAQERKRLYEGKAQKDLLRICDLTKVYSRKSTPAVDRLCVG
VPAAECFGLLGINGAGKTTTFKMLTGDIPVSGGEAFLNGYSIRTEMRDVHQNMGYCPQFD
AIDDLLTGREHLEFYARLRGVPEKEVAMVAEWGIQKLGLVKYSSKSAGTYSGGNKRKLST
AIALIGCPQVIFLDEPTTGMDPKARRFLWDCILSIIKEGRSVILTSHSMEECEALCTRMA
IMVNGRFKCLGSIQHLKSRFGDGYTVIVRVGGSPPALKPVEDFVRQSFLGSVLKEKHHNT
LQYHLPYTQGALAHIFSQFTSHQQRLGVEDYSVSQTTLDQVFVNFAKLQHGEDDPQAHDN
AVDTSDELPMESLKTSREAQEV
NT seq
6729 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttcactctgctcctgtggaagaacttcactctccggaagaga
caaaaggtgcggctggtcgttgaagtggtgtggcctctgttcctcttcatcatactggtg
tgggtgcggtccaccaatacgcccgtctttaaaggccaatgccacttcccgaataaagcc
atgccgtcggctggcgtgcttccctggcttcaaggaatgatgtgtaacatcgacaatccc
tgtttgagcgacccgacgccgggggagacgccgggacaagtcaacaacttcaacgactcc
atagtttcaaggatgttgatagagctgcaaagcctcctagggaacggatccattctcagc
agggctcggtttctggcagaggacctcgaccagtgggattcagtgctggcaaaggcaaac
cctggcaacgctcaaccggtgatcctgaggagtgtcctcagagacaatgaaactttctcc
acacatctaaaagaaaatttgtcgatgccgccagcggtggtccaaagcctcatgaatgct
gagattaaactcaatccaacgacgggcctcccgagaccaggcgacctgaggagcgtcctg
tgcgaggggacggatctggatgagtatatccaatttagcagccaagcccaaaaggaggct
tttcaaaatgtcagctgctcccgcgatccgcagcagctgattaacgcccagcaagtgttc
cagcggaacctggatgggaggaaagtgctttctgcggtacctgcagctttggatctgaat
gtaaccgacacagtcacactgattgggaaaaccactcaagatgcattaccagtgattgag
gagatgaccaggttgcagaactccatgatcttcgaagctgccagttctctggatttccaa
aaagacatgattggcagtatcaatatgctactttgtggaaagccgcctaacatcagctta
agctcacctacaccgatggataacaagacgtctgtctccattaggagcaacagttccgat
gctttttgtcagactcttgtcgaaaccctggagggaacacctggtctgcgctacatttgg
agcaccttcaagcagttattgcaagggaaggtcctctacacacccgatacacctgctgtt
cgccttgtggtgaaggaggcaaatagcacattcaatgccctggctatgctaaaggagctc
gctgatttgtgggaggaactcgggcctcgtgtctgggataccctgcaaaatggccggcaa
gtcaacacattacggacgttgctggcaaatccactgtttgctgctgcgctcaaccagcgg
ctcgtcggcacgggatggacgagcgaggcgctggccaacttcctgtacaacgggcctcca
gcggaccggccccacggcgcggcgccctacgactggcgggacaccttcaacgccacctcc
ggcgccctgaagctcctctcaaagttcctcggttgtttaaacctgaataagtttgaggcg
gcccccacggaaagccgcctggtgagcagagccctgcagctcctggagaacgggaccttc
tgggctgccatcgtctttgaaaacctccagccgaactccagcggcctcccagcgtacgtc
aagtacaaaatccgcatggacattgatgacgtggagcccaccaataaactcaaagacagg
tcttggtctcccggggctcggggcaactcctttaacgacctgcgctatatttggggaggc
ttcgcctacctgcaggacatgatggaccacggtataatacaagtgcaaacctcaaagacc
cagccccttggagtttttgcacagcagatgccgttcccctgctacgtagatgacagcttc
gtgcagagcatcggaggcatcctccccatgttcctggtgctggccttcatgtacaccgtg
tgcatgaccatcaaaggcctcgtgctggagaaggaactgcggctcaaggaggtgctgcgc
gtcgttggcattcagaacggcgccctgtggtctgcgacgttcacagagaacattgttctg
ctcacggttccctgtgcgctcataagtgtcatggttaagtatggcaaagtgctgcagtac
agcgacccctcggtgatctttgtcttcctgctggtgttctgcctggcgaccatcactcag
tgcttcttcattagcgtcttcttctctaaggccaatttagcagcggcgtgcggcggcctc
atctacttcgtcctctacctgccgcacgtcctctgctacgcctggagggacgtcatgggt
tttcaggccaaggttgcagtgagtctgctgtcgtgtgtggccttcggctacggctgtgag
aactttgccaagtacgaggagcaaggcatcggcatccagtggtacaacatcaacaccagt
ccggaggagggagggcgctacaccttcatagtgtccatcgtcatgatgctcgttgatgct
gcaatttactgccttctcacctggtacatcgaaaatgtctttccaggccaatatggaatc
ccgaggccgtggtacttccccttcactgcatcctactggtgtgggacagcctccacggcc
gccgctgaccccgccgcgctgcagaactccaccgaacacgacgagtacctggagaaaccg
tctcccaatatgaaagcaggggtctcagtccgcaatctcgttaaaatctacaagactgga
aaaaagcttgccgtggacggactgagcatggacttctaccagaatcaaatcacatctttc
ctcggccacaatggagctggaaaaaccaccacaatgtcaattctgacaggactgttccca
cccacgtcggggacagctctcatcaacggatatgacatcctcactgacatggacagcatc
cgaaagtacttgggaatgtgcccgcagcacaatgtcttattcaatgacctcacggtggag
gagcacatctacttctacgccaggttgaaaggacgcagccgagcggaggtgaaaattgag
atggaccagatgattaaggatgtcggcttaccacacaagcggaaggagcttgctaagaac
ttgtcaggtgggatgcagaggaagctgtctgtggcaatagcgtttgtcggcggctcaaaa
gtcgtcatcttggacgagcccacagcaggagtggacccttacgcccgacggggtatctgg
gaactgctgttaaaatacaaacaaggtcgcaccatcattttgtccacacaccacatggac
gaggcggacatcttgggcgatcgcatcgccatcatctcccagggaaagatgcgctgcttc
ggctcctcgctgttcctgaagaaacgtttcggcagcggctactacctcaccctggtccgg
gatgggactgagaagatggcggctcagcgcggcggcatcatacaccacgaggccaaagag
gagagagacttttctccgaggagcagcagcccggatgacggcatcggcagccagagctgg
aacaacacggagccctcagctgacttggcggctctagaccaaatcgtgcggcgccacgtc
cccggggcggtcttcttggagagcgtcggccaggagatcacctacatactgccttacggc
ggagccagagacgggaccttcgccctgctgttccaagggctcgacctggccatggcggac
cttggcctgacgagctacggcatctctgacaccacgctggaggagatattcctcaaagtg
gctgaagatagtggagtggatgcagaaataccaacaacaaaggagccgttggtgagagac
tgcaaaagaggctccggtacatccaagcggaacagcatcgccagcgtccacatgaaaacc
gagcaagtctccggactgagtgacttaaaggagaaattcacaagtaaagttgaagactta
acgagcaacgccgtggtcagcgggaagggatccacggtcatcgccgggtggaagctcatc
cgcaggcagttcctggcgcttttcatcaagcgcttccaccacgcccgaaggagccgcaag
ggactcgtcgcccaggtggtcctgcccgcggttttcgtgtgcctgtctctgatcttctcg
ctcatcgtcccgcccttctccgaatatccaagtctggagctgcaaccgtggatgtatatg
cctcagaccgacttttacagcaatgatgggccagacatcgttgaggtgtctaaggtggtg
gagaccttggtgaacaagcctggctttgggactcgctgcatgaatggaaacccaataccg
aagttgccatgttctttgagtggctctgattggttcactcccgccgttgatcagtccgtc
gctgacgtcttcatcaacgggaattggagcatgtctaacccctcccccccgtgtcagtgc
agcacccctgcacggaccatcatgttacccgactgtccacgtgctgcaggagggctccct
ccacctcagaggatccagaacacaacagaaacgttgttggatctcactggacggaacgtt
acggacttcttggtgaagacctttgaacgctcgggcaaaacaaggtacgggggcatctct
gtcggaggcgtcaactcccaagtccgcctgagcgaggcagcaatcaaagcttcattcagg
gatttaaaaggcctattcaattcctctcgggataatttgactgaccagatcttccagaag
gctgagacgctgctgaagaagctgggaaccaaggacaacttaaaggtgtggttctacaac
aaggcctggcatggcatggtgtccttcctcaatgtggcaaacaacgccatcctgagggga
aatctgccagcgggacaggatccccgtcagtacggcatatccgtgtccaatcaccccctc
aacctcaccaaggcgcagctctcctctgcagccttcgcctcgtcctccactgatgtagtg
gtgtccatctgcgttatctttgccatgtccttcatccccgccagctttgtcctcttcctc
atccaagagagggtgaacaaagccaaacatctgcaatttgtcagcggagtgaacccggct
gtctactggttggccaattttgcctgggacatgtgtaactacgtcatcccatgcctcatt
gtgatcttcatcttcctctgctttcaacaaaaagcctacgtttcacctcctaacctgcct
gctttgattctgctgcttttcttttatgggtgggccatcacgcccatgatgtacccggcc
tccttcatcttcagcgtgcccagcacggcctacgtggtgctgacctgcatcaacctcttc
atcggtataaacggcagcatcgccacctttgttctggagctcattgatgacgacaatgtc
tcccgcatcaatgacattgtgaaaaacgtgctgctgatattcccccatttctgcctgggc
agaggactgatcgacatggctcagaaccaggcaatggccaccctcttcagcggttttggg
gaagatcgtttcaaggacccactcagctggaatatggtgggaaagaacctttgtgccatg
tccatccagggagtcgtcatgtttaccatcaccatcctcatccagtataaatttttctgc
aagcccaggcttatttcaggaaagtcattatcttcagaggaggaggaggatatcgatgtt
gctcaggaacgcaagcgcttgtatgaaggcaaggcccagaaagaccttctgaggatctgt
gacctcactaaggtgtactctcggaagagcacccccgccgtggacaggctatgtgtggga
gtacctgccgcagagtgtttcggcttgctgggaatcaacggggccggaaaaaccaccacg
ttcaagatgctcacaggagatatcccagtctccggtggagaggccttcctaaatggatac
agcatacgaacagaaatgagggacgtgcaccagaacatgggctattgtccccagtttgat
gctatcgatgacctgctgactggacgggagcatcttgagttttacgccaggctacggggg
gtaccagaaaaagaggtcgccatggtggccgagtgggggatccagaaattggggctggtc
aaatattccagcaaatcggcagggacctacagcggagggaacaaacgcaagctttccaca
gcgatagccctgatcggttgtcctcaagtcattttcctggatgaaccaacaacggggatg
gaccccaaagcgcggcgcttcctgtgggactgcatcctgagcatcatcaaagagggccga
tcagtcattctcacatcgcacagtatggaggagtgtgaagccctttgcacgcgcatggcc
atcatggtcaatggtcgcttcaagtgcctcggaagcatccagcatctaaagagcagattc
ggtgatggctacacagtgattgtgagggttggcggctcgccgcccgcattgaagcccgtg
gaggactttgtccggcagtccttcctgggcagcgtcctgaaggagaagcatcacaacacg
ctgcagtatcatctcccgtacacccagggggccttggcccacatctttagccagttcacc
agtcaccagcagaggctcggggtggaggactactccgtgtcccagaccacgctcgatcag
gtctttgtgaactttgcgaagctccagcacggggaagatgaccctcaggcccacgacaac
gcagtggacacttcagatgagctgccgatggagtctttgaagacctcgcgggaagcgcag
gaggtttag
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integrated database retrieval system
