Pungitius pungitius (ninespine stickleback): 119222676
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Entry
119222676 CDS
T07626
Name
(RefSeq) F-box only protein 40
KO
K10315
F-box protein 40
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119222676
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
119222676
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
F-box_4
zf-TRAF_2
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
119222676
NCBI-ProteinID:
XP_037335386
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Position
3:15114839..15119751
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AA seq
670 aa
AA seq
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MPVGHHEHCITCYSVHCQVPVQISVSCIVVKCRHNCGATFHMCKQEEHHLLCPNETVPCL
NVEFGCPFTLVRHRMAKHLEVCPASVVCCSQEWNRWPVSETDLAFYKSLSESPQTEVNLD
VALALRDQELLFRSIKMKNIFPELMVGDSAPQNGSADEPTSSLEYVAFLENDCETIEGRR
TSQDEREALAKSRDVDDIQNYSPWEKIFNKEMEGCKQTVKNLNKNEEKAKEEQESSNRPA
ETSDSRQSRENTADPTRTYATDLAPWQDGVLQRLSSEVNIAEYNMYMAHNGAMLINFGQL
SACTPRERDFVYGSLEPIEVQTIRSFIAPTSYRAKRNYLKDRKVKTNVSVDTADLGVLVE
DLPKCDEVSATLLLSLERELRGHLISESAGRDGLYVDIGTQTYNFACAPFQTEATLADVI
SNQPRGLHVQVEAESVTRRHNRSSSAFSHMCGLFFRRDEYRSHFRNVHCDIQASLSGWFQ
QRCPLAYLGCAFAQTRLHPAGHRANVKFCQNVSAFVLEPEVPSLLREGGETFSPKTSGAH
NLDALSGLPLEILQHLAAYLDSFTLSQLSQVSHLMREVCATLLPERGMVSLKWKKKTYSH
GGSSWKCRKKVWEFSSMFSSVEKWNLSCSPPMSDHLKTCSFYQREKHTEPVALPCLGEVR
DKRGGIKCKR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgggccatcatgagcattgcatcacgtgttacagtgtccactgccaagtccct
gtgcagatctccgtctcatgcatagtcgtcaagtgtcgtcacaactgtggcgccactttc
catatgtgcaagcaagaggagcaccatcttctctgtcccaacgagaccgtcccctgcctc
aatgtcgagttcgggtgtccttttaccctggtgcgccacaggatggccaaacacctggag
gtgtgtcctgccagcgtggtctgctgctctcaggagtggaaccgctggcctgtttcagaa
acggatttggccttctacaaaagtctttcggaaagccctcaaactgaggtcaacctggat
gttgccctggctctgagggaccaagagctgctgtttcgatccatcaaaatgaagaacatc
ttccctgagttgatggtgggggattctgcccctcagaatggatctgcagatgaaccaacc
tcgtctttagagtatgtagcatttttagaaaatgactgcgagacgatcgagggaagaaga
acgagtcaagacgagagggaggctttggcaaagagcagggatgtggatgacatacagaac
tatagcccttgggagaaaatattcaacaaagagatggagggatgtaagcaaacagtgaaa
aatctgaacaagaatgaggaaaaggcaaaagaggagcaagaatcatcaaaccgcccggcg
gagacaagcgactcccgccagagccgagagaacactgctgaccctacaagaacgtacgca
actgaccttgcgccgtggcaagacggggttctccagaggttgagcagtgaagtcaacatt
gctgagtacaacatgtacatggcgcacaacggggcaatgttgatcaactttggccaactt
tctgcttgcaccccaagagaaagggattttgtttatgggagtctggagccaattgaggtt
caaaccatccgctcatttattgctccgactagctatcgggcaaagcgcaattacctgaag
gatcggaaggtaaagaccaatgtcagcgttgacacggcagatttgggtgtactggtcgag
gatctcccaaagtgcgacgaggtcagcgccacactcctgctctccctggaaagggaactg
agaggacatttaatctcagagagtgcggggagggatggtctttacgtagatatagggact
caaacatacaactttgcctgcgcgccgtttcagacagaagcgacgctagcggatgtcatc
tccaaccaaccccgcggccttcacgtgcaggtggaagcggagtctgtcaccagaagacac
aacagatcgagttcagccttcagccacatgtgtggcctcttctttcggcgagacgaatac
cgctctcatttcaggaacgtgcactgtgacatacaggcgtctctgagcggctggttccaa
caacgctgccctttggcgtacctcggttgcgcattcgcccagacaagacttcacccggca
ggtcatcgagccaacgtcaaattttgccaaaatgtcagcgcctttgtcctcgagccagaa
gtcccttcactcctgcgtgaaggcggggaaaccttcagcccgaagacaagtggcgcacat
aatctggatgccctaagtggattgcccctggagatccttcagcaccttgctgcctacctt
gacagtttcacattatctcaactgtcccaagtgtcccatctcatgagagaagtgtgtgcc
acattgttgccggaaagagggatggtctctctcaagtggaagaaaaagacatattcccat
gggggaagctcctggaaatgtcgaaagaaagtttgggagttcagctctatgttttcctct
gtggaaaaatggaacctcagctgcagtcctcccatgtcagatcacctgaagacctgctcc
ttctaccagagagagaagcacactgagccggtggctttaccctgcctaggagaggtcaga
gacaaacgcggaggaatcaagtgcaaaagataa
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