Pungitius pungitius (ninespine stickleback): 119222680
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Entry
119222680 CDS
T07626
Symbol
sars1
Name
(RefSeq) serine--tRNA ligase, cytoplasmic
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
119222680 (sars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ppug01007
]
119222680 (sars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ppug03016
]
119222680 (sars1)
Enzymes [BR:
ppug01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
119222680 (sars1)
Amino acid related enzymes [BR:
ppug01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
119222680 (sars1)
Transfer RNA biogenesis [BR:
ppug03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
119222680 (sars1)
Prokaryotic type
119222680 (sars1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
NOD
Motif
Other DBs
NCBI-GeneID:
119222680
NCBI-ProteinID:
XP_037335388
LinkDB
All DBs
Position
1:complement(21663288..21670728)
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AA seq
514 aa
AA seq
DB search
MVLDLDQFRSDKGGDPETIREVQRKRFKDVTLVDKLVAADTEWRKCRFTADNLNKAKNLC
SKSIGEKMKRKEPVGEDESLPEEAQNVESLTAEVLSPLTVTQIKKVRQLVDEAVEKSDGE
RIKLEAERFEYLREIGNLLHPSVPISNDEDADNKVERTWGDCSVQKKYSHVDLVVMIDGF
DGERGAVVAGSRGYFLKGPLVFLEQALITYALRLLHGKNYTMLYTPFFMRKEVMQEVAQL
SQFDDELYKVIGKGSEKADDNSVDEKYLIATSEQPIAAFLRDEWLKPEDLPIRYAGFSTC
FRQEVGSHGRDTRGIFRVHQFEKIEQFVYASPHDGKSWEMFDEMIGTAEEFYQTLGIPYR
IVNIVSGALNHAASKKLDLEAWFPGSGAFRELVSCSNCLDYQARRLRIRYGQTKKMMDKA
EYVHMLNATMCATTRVMCAILENYQTEEGIVIPEMLQPFMPPGMTEIIKFVKPAPIDQEM
SKKAKKKNDGGKKKQGAGDQNLPVAMETMSVNDS
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggtgctcgacttggaccagttccgctccgacaaaggtggcgacccagaaactatccgt
gaggtccaaaggaagaggtttaaagatgtgacgctcgtcgacaaactggtcgccgcagat
acggaatggagaaaatgccgcttcaccgcagacaacctgaacaaagctaagaacctctgc
agcaagagcattggggagaaaatgaagagaaaggagccggttggcgaggatgagtcccta
ccagaagaagcccagaacgtggagtcgctaacagctgaagtgctctcgcccctgacggtg
acccagatcaagaaagtgcgtcagttggtggacgaggcggtggagaaaagcgacggcgag
aggataaagctggaagcggagcgctttgagtacctgagggagatcggcaaccttctgcac
ccgtctgtacctatcagcaacgatgaagacgctgacaacaaggtggagcgtacctggggc
gactgcagcgtccagaagaagtactcccatgtggacctggtggtcatgatcgatggcttt
gatggagagaggggagcagttgtggctgggagcagaggttactttctgaagggtcccctg
gtgttcctggagcaggctctcatcacttacgccttgaggttactccacggcaagaactac
accatgctctacacgcccttcttcatgaggaaggaggtcatgcaggaagtcgcccagctc
agccagtttgatgatgagctttacaaggtgatcggcaagggcagcgagaaggctgacgac
aactccgtcgacgagaagtacctcattgccacctcggagcagcccatcgccgccttcctg
agagacgagtggctcaagcctgaggacctgcccatccgctatgccggcttctccacctgc
ttcaggcaggaagtgggctcccacggccgggacacccgcgggatcttcagggtccaccag
tttgagaagatcgagcagtttgtctacgcctcgccgcacgatggcaaatcgtgggagatg
ttcgacgagatgatcgggacggcagaagagttctaccagacgctaggaattccttatcgc
atcgtcaacattgtctctggtgccctgaatcacgccgccagcaagaagctggacctggag
gcctggttccccggctccggggccttcagggagctggtctcctgctccaactgcttggac
taccaggcccggcgcctccggatccgctacggtcagacaaagaagatgatggacaaggcg
gagtacgtgcacatgttgaacgccaccatgtgcgccaccacacgcgtgatgtgcgccatc
ctggagaactaccaaaccgaggaaggcatcgtcattccagagatgctccagccattcatg
cctcctggtatgacagagatcataaagtttgtgaagccagcgcccattgaccaggagatg
tctaagaaagccaagaagaagaacgatggagggaagaagaagcagggggcgggagaccag
aaccttcccgtcgctatggagaccatgtcggtcaacgactcttag
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