Pungitius pungitius (ninespine stickleback): 119222692
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Entry
119222692 CDS
T07626
Name
(RefSeq) DDB1- and CUL4-associated factor 1-like
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ppug01001
]
119222692
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119222692
Enzymes [BR:
ppug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
119222692
Protein kinases [BR:
ppug01001
]
Serine/threonine kinases: Other
Other
119222692
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
119222692
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
EIF3I
ARM_PUB
LisH
WD40
WD40_Gbeta
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
119222692
NCBI-ProteinID:
XP_037335404
LinkDB
All DBs
Position
1:complement(15201895..15214524)
Genome browser
AA seq
1535 aa
AA seq
DB search
MASASASVDSKAELTALLEQWDTEQHGSTQELVGILTKISELVEKETEEYHKADPDPFDD
RHPGRADPECALGHLLKILFKNDDFMNTLVNSYVMTSREFSLNAAACRLLQNIMPGLETA
VVFQEKEGIVEQLFKWAQEAEQPLRIYATGLLAGAMENQDIAANYREENSVLVPLMLHRM
RELQDQDAENRRDIKRPSPRKTMSEPLLPLDEETLDGGFEEEPFAPGRNGAEREATGPPE
DAGISFSTIDPENELSFRLNSPLRTGSRGPSTPKTMMKPMSAPGRQGASDGYLKRKAERE
SGRTLKQKLNFSLPDPDRNFSELSNSSWSEMSPWVIGNNYHLFPLTPEIEQRLILQYLTP
LGEYQELLAVFMQMGARELLMHYVDLKQTNDVQLTFEALKYLASLLLHKKFAAEFVAHGG
VQKLLEIPRPSMAATGVSLCLYYLAYNQDAMERVCMLPHSILSDVVGYTLWLLECSHASG
CCHATMFFSISFSFRAVLELFDGQDGLRRLVNLISTLEILNPEDQGALLSDDEIFSSRQT
AKHTCMALRRYFEAHLAIKVEQVKQSLQRTEGGAPIHSQPYYKAVSYSREQVVEMMEFLI
EYGPLRLYWEPAEVFHKLSCVQLLLQLISIACDWSTYYGRSDTVRYALDILSILTVVPRT
QLLLSESVAVLDEGGATVSTVGMSIVLAVAEGEVFVNDADIQKSALQVAINCVCAPDKRM
SSIGKFIAGTPRRRLPQQSKASESVLTKMWNVVQSNNGIKVLLSLLTVKMPITDADQIRA
LACKALVGLSRSTSVRQIISKLPLFSSGHIQQLMKEPVLQDKRSEHVKFCKSAAELIERI
SGKPLLIGTDVSLAWLQRASVVAKSRISFPEKELLLLIRNHLVAKGLHDTATALTKEAEL
PMACLSLSTHVGPAFPPVAPPLPASPAATLPRTPRLANGVGSRLVSHSSSPGSGNPRPST
SQPAVSSSSASSSAACAFPAPPAAPCANGSPLIGRIVFSRERAAGCVAASCKKPRVLRQK
SDHGAFSQSPAMKKQFDRHLPSPPALDSIITEYLREQHARCKNPVATCPPFSLFTPHQCP
EPKQRRQAPVNFTSRHTRRVIYPKYGGVDGGCFDRHLIFSRFRPISVFREAEEDESGFMC
CAFSARERFLMLGTCTGQLKLYNVFTGQEEASYSCHSSAITHLEPSRDGSLLLTSASWSY
PLSALWGMKSVFIMKHSFLGDHYVEFSKLSQDRVIGTKEHIARIYDIQTGQVTLTLNNPD
LANNYKRNCATFNPTDDLVLNDGVLWDVRTAQAIHKFDKFNMNISGVFHPNGLEVIVNTE
IWDLRTFHLLHTVPALDQCRIVFNNNGTVIYGAMLQADDEDDMMEMQIKSPFGSSFRTFN
ATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQDSVNTDTVCRLYEVGRQRLAEEEEEE
DEEDQEDDDQDEDDDDDDSDEDDVDDTDPLIAELENGGEDDDEDGNDELSPSDEEVSRLL
EDEDDSDNDDADQDGDNDSSDNSDLEDDIILSLNE
NT seq
4608 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcatctgccagcgtggactccaaggcagagctgaccgctctcctggagcag
tgggacacggagcaacacggcagcacgcaggagctggtcggcatcctcaccaaaatctcc
gagctggttgagaaagagaccgaggagtaccacaaagcggaccccgacccgttcgatgac
cgacaccctgggagagctgatcccgagtgcgcgttaggacacctgctcaagatcctgttc
aagaacgatgacttcatgaacacgttggtgaatagctacgtgatgaccagcagagaattc
tccctcaatgcagcagcctgtcgcctgcttcagaacatcatgcccgggttggagacggcc
gtggtgtttcaggagaaggagggcatcgtggaacagctgttcaagtgggcgcaggaggcc
gagcagcccctcagaatctacgccacgggcctgttggccggcgccatggagaaccaggac
atcgccgccaactacagggaggagaactccgttctggtgcctctgatgctgcatcggatg
cgcgagcttcaggatcaggacgcggagaacaggcgggacatcaagcggccgagcccccgg
aagacaatgagcgagccgctgctgcctttggacgaggagacgcttgacgggggcttcgag
gaggagcccttcgcaccggggaggaacggcgccgagagggaggcgacggggccgccggag
gacgccgggatttccttctcgaccatcgaccccgagaacgagctctcgttccggctcaac
tcccctctcaggaccggcagccgcggcccctcgacccccaagaccatgatgaagcccatg
tcggcgccgggccgccagggcgcgtctgacgggtacctgaagaggaaggcggagagggag
agcggcaggaccttgaagcagaagctcaacttctctctgccggacccggacaggaacttc
agcgaactttccaacagcagctggtcggagatgagcccctgggtgatcggcaacaactac
cacctgttccctctgacccccgagatcgagcagaggctcatcctgcagtacctcaccccc
ctgggagaatatcaggagctgctggcggtgttcatgcagatgggcgctcgggagctactc
atgcactacgtggacctgaagcagaccaacgacgtgcagctcaccttcgaggccctgaag
tacctggcgtctctgctgctgcacaagaagttcgcagcggagttcgtggcccacgggggc
gtgcagaagctgctggagatccccaggccgtccatggctgccaccggagtgtctctgtgc
ctgtactacctcgcctacaaccaggacgccatggaacgggtgtgcatgctgccccactcc
atcctgtcggacgtggtcggctacacgctgtggctgctggagtgctcgcacgcgtccggc
tgctgccacgccaccatgttcttctccatctccttctccttccgcgccgtgctggagctc
ttcgacgggcaggacggcctccggcgcctcgtcaacctgatcagcaccctggagatcctg
aaccccgaggaccagggggcgctgctgagcgacgacgagattttctccagcaggcagacc
gccaagcacacctgcatggccctgcgcaggtacttcgaggcccacctggccatcaaggtg
gagcaggtgaagcagtccctccaacgcacagaggggggcgcccccatccactcgcaaccg
tactacaaggccgtgagctacagccgcgagcaggtggtggaaatgatggagttcctgata
gagtacggcccgctcagactctactgggaaccagcggaggtctttcacaagctgtcgtgt
gtccagctcctcctgcagctcatttccatcgcctgtgactggagcacctactatggcagg
agcgacacggtgcgctatgctctcgacatcctgagcatcctcaccgttgtcccgaggacg
cagctgctgctgtcggagtccgtcgccgtgctcgacgaggggggagccaccgtctccact
gtcgggatgagtatcgtcctggccgtggcagagggagaggtgtttgtgaacgacgccgac
attcagaagtccgccctgcaggtcgccatcaactgcgtgtgtgctccggacaaacgcatg
tccagcatcggcaagttcatcgcggggaccccccgccgccgcctcccccagcagagcaag
gccagcgagagcgtgctcaccaagatgtggaacgtggtgcagtccaacaacggcatcaag
gtgctgctgtccctgctgacggtgaagatgcccatcaccgatgcggaccagatccgagcc
ctggcctgcaaggctctggtgggtctgtctcgctccacctccgtcagacagatcatcagc
aagctgcctctgttcagcagcggacacatccagcagctcatgaaggagcccgtgctgcag
gacaagcgcagcgagcacgtcaagttctgcaagtcggcggccgagctgatcgagaggatc
tccgggaagccgctgctcatcggcacggacgtgtccctggcgtggctgcagagggccagc
gtggtcgccaagtccaggatctccttccccgagaaggagctgctgctgctcatcaggaac
cacctggtggccaagggcctccacgacaccgccaccgccctcaccaaggaggcggagctc
ccgatggcgtgcctgtccctctcgacgcacgttggccccgctttcccgcccgtcgctccc
cccctgcccgcctcccccgccgccacgttaccccgcaccccgcggctggccaacggcgtc
gggtcgagactcgtgtcccactcctccagcccgggctccggcaacccgcggccctccacc
tcgcagcccgccgtgtcctcctcctctgcctcctcctccgccgcctgcgccttcccggcg
ccgcccgccgccccgtgcgccaacggctccccgctcatcgggcggatcgtcttctcccgc
gagcgggcggccggttgcgtcgcagcgagctgcaagaagccccgcgtgctgaggcagaag
tccgaccacggcgccttcagccagagtccggccatgaagaagcagtttgaccggcacctg
ccgtccccgccggcgctggacagcatcatcacggagtacctgcgggagcagcacgcgcgc
tgcaaaaacccggtggcgacgtgcccgccgttctctctcttcaccccgcaccagtgcccc
gagcccaagcagagacggcaggcgcccgtcaacttcacgtcccgccacacgcggagggtc
atttaccccaaatacggcggcgtggatggaggctgcttcgacaggcatctcatcttcagc
aggttccgtccgatctccgtgttcagggaggcggaggaggacgagagcggcttcatgtgt
tgcgccttctcggcgcgcgagcgcttcctgatgctgggcacgtgcacggggcagctgaag
ctctacaacgtgttcacgggccaggaggaggcgagctacagctgccacagctcggccatc
actcacctggagccctcgcgggatggctctctgctcttgacgtcggcctcgtggagctac
ccgctgtccgctctgtggggcatgaaatcagtcttcatcatgaagcattcctttctgggc
gaccattacgtggagttcagcaagctctcgcaggatcgcgtcatcgggaccaaggaacac
atcgcgcggatctacgacatccagacgggtcaagtcactctgaccttgaacaacccggac
ctggccaacaactacaagaggaactgtgctacgttcaaccccacggacgacctggtgctg
aacgacggcgtgctgtgggacgtgcgcacggctcaggccatccacaagtttgacaagttc
aacatgaacatcagcggcgtgttccaccccaacggcctggaggtcatcgtcaacacggag
atctgggacctgcggaccttccacctgctgcacaccgtgcccgctctggaccagtgccga
atcgtcttcaacaacaacggcaccgtcatctacggagcgatgctgcaggccgacgacgag
gacgacatgatggagatgcagataaagagtcccttcggttcgtccttcaggaccttcaat
gccacggactacaagccaatcgccactattgacgtcaagaggaacatatttgacctttgc
actgataccaaagactgctacctcgctgtgattgagaaccaagactctgtgaacacggac
accgtgtgccgactgtacgaggtcggccgccagagacttgcagaggaagaggaggaggag
gacgaggaggatcaggaggacgacgatcaggatgaggatgacgacgacgacgactctgac
gaggacgacgtcgacgacacggatcccctcatcgccgagctggagaacggcggcgaggac
gatgacgaagacgggaacgacgagctctcgccctccgacgaagaggtgtcccgcctcctc
gaggacgaggacgactccgataacgacgacgccgatcaggacggcgacaacgacagctcc
gacaactctgacctcgaggatgacatcatcttatccctgaacgagtga
DBGET
integrated database retrieval system
