Pungitius pungitius (ninespine stickleback): 119222861
Help
Entry
119222861 CDS
T07626
Symbol
arhgef40
Name
(RefSeq) rho guanine nucleotide exchange factor 40
KO
K24316
Rho guanine nucleotide exchange factor 40
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119222861 (arhgef40)
Membrane trafficking [BR:
ppug04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
119222861 (arhgef40)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KIAA1755_N
SOS1_NGEF_PH
RhoGEF
KIAA1755_C
PH
IQ_SEC7_PH
DHC_N2
Motif
Other DBs
NCBI-GeneID:
119222861
NCBI-ProteinID:
XP_037335705
LinkDB
All DBs
Position
1:2649110..2674666
Genome browser
AA seq
1728 aa
AA seq
DB search
MGSEAMEDCVQGALASLYPPFESTAPPLLSQVFSVLESTYQHDSLRYLLDYFVPAKHLLH
KLQQHACSQYLGCLFLHSGWPLCLGEKVVVQLSTLDWRILRSYDFYLQVVPFSTRCPRLA
LKCLAPGGRTVQEILVPESQHPLVFTTEWLHSVNKERGHKRELGGGLDTCLVSTCDGVIR
IPWKEVVYPKFIHDPSEELGQMSNHEGSKSNRQPSEGGSSLGGWGGSSSGELDSWSWDEE
EDDGLPPDRSDSEPALLRRRRSEDGLGRTARHPQLDGDYVELLEPRVGPDGGVDTRPRYL
EMHGICKTKTLPLCRRGKAIKLRKGRAWGYGRLEGSGSFRAVLGAKRDVVTPKGDILPQR
PPRPVPDREKGRRSYSSSVHDSDEGDKTSRDSEGLESHRPYFDSLFKERRPGVGKERESS
SLTLPCRDDHMGKDSESADSSVHDSRNLKVGHVIEGHSDHGSDSVFEEAEKPLNEDSDAT
TPTSDAPKRPFTGVLVSGENTNVENKMKNSSNPKANEGRDDGKTEDRACPRGKEVKTGFR
VPRRKRKGKGAKGRARSGGRIHQKGSKLQGKTAQPIPTTCSALPKLPITEEDQSKPRKQV
DEPDGVPASTHQGTEDTRKSSAEKGATSLSVCNGQSGTSILNHSNEEGGSGQLNGVTSKE
PPLLRELDTELLQSGKLKLTGTVDRLGRALVVTETDATEEGVSEEQMARVLACYHRITRP
SAKEKGLTVLMDSRRAPPSTLLLSALKSFQVSVPGGLGSVLVLLGEQQESLSHDVEGAEV
HVVRGTAVLQQHVDKQQLPQEMDGDFAHCHSDWLAFRLSLESLTEHCESAVALLGEALRS
MDTEPMPDDIKAVPLSIDRHGQLMANVLADPRLTEPQQRGGAWLAGLTNSATGLAQKSPD
CRAALAATSELYDSVDDALHRLVRGSNQRGRDLEALGRLAGLVGTLEKCDKEIDQVQSQL
EDYKDPPLSLSRLSLKQQKFKTFRETANELHSETLSVLGDLEGWCELDWAGLSAVQIRLP
PVREKLRDMSHCLSDCWTTLDNTQRLLSTLTEATQWCEVVSSSASSTCPLASLPPIPPSR
FQDARSLAMELGGGALLDLWTQTVERYQRTVAQVKPRFLQTDRAQNQGPGRPKTPAASSL
WDLMGPEGQGDWGLGAAGGDGGLQSWGSLASLFRPQTCSTLKIGEEKGSRKEGGGAGGGG
GGAGGGNFLQNLLNPAKKSPTEAPLPSKPPRRRHPSFDLQALLGPRRATASPRPAESPVG
GASRNSPMSWLGRRAVADPVIATSMAAAIPGWGGGGGGGGVLIRGVEVSSKEVVDHTGSP
RQHVLLGRTERETGTDRAGSTAQSKLYLLWCRMLSSERQYVAILKGVEETYLPLLELSDT
PASFRWKADVLFPNWAGLSAFHSQNLLPAMEGALVQSLLQQDCFSKYREQFLQYSQYIRN
KPELDSPLVTQAADFFKSKLPPASPLSPLSFPHCLQAPTQRLEQYCEALEELGGINPASD
SALSILRHAQRHGEDLRASDLIVGCPIPVAERGELVRHGELMVCGGTRRKRAGARNVFLY
QRAVVFAKHKSPAPGRSAYSYKHSIKTGEMGLTQSVGGDGLKFEVWVRQPPRTRDCVTLQ
ARDAEDKAAWTRDIAHLLWTHAINNTELCLKESLCMGISSKLLLDATGTPGSELDSVYSL
NDRVHSSCSDSSSVGSQKEGGSPASGRDPRRSSGSTGHTQSPSPSTAV
NT seq
5187 nt
NT seq
+upstream
nt +downstream
nt
atgggctcggaggcgatggaggactgtgtgcagggggcgctcgcatcgctctaccctcct
tttgagagcacagcaccacccctcctctcacaggtcttttccgtcctggagtcgacctat
cagcacgacagtctccgctacctcctggactacttcgttcccgccaagcacctcctgcac
aaactccagcagcacgcctgctctcagtacctgggctgcttgttccttcactccggctgg
cctctgtgtttaggagagaaagtggtcgtacagctctccaccctggactggaggatcctg
cgcagttatgacttctacctgcaggtggtgcccttctctacgcgctgcccccggctggcc
ctaaaatgtttggcccccgggggacgcaccgttcaggaaatcctggtacccgagtcccag
cacccgcttgtgttcaccaccgagtggctgcacagcgtgaacaaggaacgaggccataag
agagaacttggaggaggactggacacctgcctggtcagtacatgtgacggtgtgattcga
attccgtggaaggaggttgtctatccaaaattcatccacgacccttctgaggagctgggc
cagatgtccaaccacgagggcagcaagtccaatcgccagcccagtgaggggggcagcagc
ctcgggggctgggggggctcatcctcgggagaactggactcctggtcctgggatgaggag
gaagacgatggtttaccaccagatagatcggattctgagcctgcgcttctacggagaagg
cgcagcgaagatgggcttgggcggacggcgaggcaccctcagctggacggggactatgtg
gagctgttggagcccagagtgggtcccgatggaggggttgacacgaggccaaggtacctg
gagatgcatggaatttgtaagaccaagacgttgcccctgtgcaggaggggcaaagccata
aaactccggaagggcagggcttggggatatgggagactggaagggtcaggaagctttcga
gctgtcctcggtgccaaaagagacgttgttaccccaaaaggtgacattttaccacaaagg
cctccacgcccagtccctgaccgtgagaaagggaggcggtcttactcctcttctgtccac
gactctgatgagggagataaaaccagcagagactctgagggtctggagagccaccggcct
tattttgatagcctgttcaaagagagaaggcccggcgtgggcaaggagagagaaagcagc
agcctcacactgccgtgcagagacgaccacatgggtaaagactcggagagcgccgatagt
tctgtacatgactcgaggaacctcaaagtcgggcatgtcatagagggccactcagatcac
ggatcagactccgtttttgaggaggcagaaaaaccactgaatgaagacagtgatgctacg
accccaacatcagatgcaccaaagagaccatttaccggggttttggtaagtggagaaaat
accaacgttgaaaataaaatgaagaattcgtccaacccaaaggcgaacgagggaagggat
gacggaaagacagaggacagagcttgtcccagaggaaaggaagttaaaactggattccga
gtgccaaggaggaaaaggaagggaaagggggccaaaggcagggctaggtctggtggtcga
atacaccaaaagggatccaaactgcaaggtaaaactgcacaaccaattcccacgacctgc
tctgccttgccgaagctaccaatcacagaggaggaccaatcgaagccaaggaaacaggta
gacgaacccgacggagtgccggcttcaacacatcaggggacagaggacacaaggaaaagc
agtgcagagaaaggagccacatctttatctgtctgcaatggccaatcaggcacatctata
cttaaccactctaatgaggagggagggtcaggccaactaaatggtgttacatcgaaagag
cctccgctgctgagggaactggacacagagctcctacagtccgggaagctaaagttgaca
gggaccgtggacaggctgggacgcgctctggtggtcacagagacggatgcaacagaggag
ggcgtctctgaggagcagatggcccgggtcttggcctgctaccacagaataactcggcct
tcggctaaagaaaaaggtctcacggtgctaatggacagcaggcgcgctccgccctccacc
ctccttctctctgcccttaaatcattccaggtgtcggtaccgggcggtctgggatccgtt
ctggttttgttgggagagcagcaggagtccctttctcatgacgtggaaggagccgaggtc
cacgtggtgcgaggaacagctgtccttcagcaacacgttgacaagcagcagcttccccag
gagatggacggagactttgcccactgccactcggactggctggccttcagactaagcctg
gagagtctgacggagcactgcgagagcgccgtggcgctcctcggagaagccctgcgctcc
atggacaccgagcccatgccggacgacatcaaggccgtccccctgagcatcgacaggcac
gggcagctcatggcaaacgtcctggcagacccgcgcctgacggagccacagcaaaggggc
ggggcgtggctcgcggggctgaccaatagcgcaactggactggcgcagaagtccccagac
tgcagagctgctctcgccgcgacctctgaactctatgacagcgtggacgacgccctccac
cgtctcgtccgggggtccaaccagaggggtcgcgacctggaagctctgggacgactggcc
gggctggtgggcacgctggagaagtgtgataaggagattgaccaagtccagtcccagctg
gaggactacaaggaccctcctctgtccctcagcagactctcgctcaagcaacagaagttc
aaaaccttcagagaaacggccaatgagctgcacagcgagaccctgtcggtgctcggcgat
ttggagggctggtgcgagctggactgggcgggcctgagcgccgtccagatccgacttccc
ccggtcagggagaagctgcgagacatgtcccactgtctgtccgactgctggaccaccctg
gacaacacgcagaggctgctgtccacgctgaccgaggccacccagtggtgcgaggtggtc
tcctcctcggcctcctctacctgccccctggcctcccttcccccgatcccgccgtcccgt
ttccaggacgcccgctccttggccatggagctggggggcggggcgctcctggacctctgg
acgcagacggtggagcgctaccagcggacggtggcgcaggtcaaaccgcgcttcctgcag
acggacagggcccagaatcagggcccggggaggcccaagacgccagccgccagcagcctg
tgggacctgatgggtcccgagggacagggcgactggggattgggggccgcgggaggcgac
ggggggctccagtcctgggggtcgctggcgtcgctcttccgaccgcagacctgctccacg
ctgaagataggcgaggagaaggggagtaggaaggagggaggaggggcgggaggtggaggg
ggcggagccggtggggggaatttcctgcagaaccttctgaatcccgcgaagaaaagcccc
acagaggcaccgctcccctcgaagccgcccaggaggcgccacccgagcttcgacctccag
gccctcctgggtccccgcagagccacggcctcccccaggcccgccgagtccccggtgggc
ggggccagccgcaactcgcccatgtcgtggctggggaggcgggcggtggccgaccccgtg
atcgccaccagcatggccgcggccatccctggatggggaggaggaggaggaggaggaggg
gtgttaattcggggggtggaagtcagcagcaaagaggtggtggaccacacagggtcgccg
cggcaacacgtgctgctgggcaggacggagagggagacggggaccgatcgggccggatcg
accgcacagagtaaactgtacctgctctggtgcaggatgctgagctccgagaggcagtat
gtggccatcctgaagggggtggaggagacgtacctccccttgctggagctctcggacaca
ccggcctccttcaggtggaaggctgacgtcctcttccccaactgggccggtctcagcgcc
ttccactcgcagaaccttctgccggccatggagggcgctctcgtgcagagcctgctgcaa
caggactgcttcagcaaataccgggagcagttcctgcagtactcccaatacatccggaac
aaaccggaactggactctccgctggtcactcaggccgccgacttctttaagtccaaactg
cccccggcctcccccctctcccccctgtccttccctcactgcctccaggctcccacacag
agactggagcagtactgcgaggccctggaggagctgggaggcataaaccccgcctccgac
tccgccctctccatcctgagacacgctcagcgccacggcgaggacctccgggccagcgac
ctcatcgtgggatgtccgatcccggtggcggagcgcggcgagctggtgcgtcacggcgag
ctgatggtgtgcggcgggacccggaggaagcgggcgggcgccaggaacgttttcctctac
cagcgcgccgtcgtcttcgccaaacacaagagccccgcgccgggacgctccgcctacagc
tacaagcacagcatcaagaccggcgagatgggcctgacccagagcgtgggcggcgacggg
ctgaagtttgaggtctgggtccggcagcccccccggaccagggactgcgtcacgctgcag
gcgagggacgcggaggacaaggcggcgtggacccgggacatcgcccacctgctgtggaca
cacgccatcaacaacaccgagctgtgcctgaaggagtcgctgtgcatgggcatctccagc
aagctgctgctggacgccacggggacgccgggctccgagctggactcggtctactctctc
aacgaccgagtccacagtagctgctcagactcctcctctgtcggcagtcagaaggagggg
ggatccccggcgtctggaagggaccccaggaggagctccgggtcaacaggtcacacccag
agtccgtccccctccacggccgtttag
DBGET
integrated database retrieval system
