KEGG   Pungitius pungitius (ninespine stickleback): 119222865
Entry
119222865         CDS       T07626                                 
Symbol
col4a5
Name
(RefSeq) collagen alpha-5(IV) chain
  KO
K06237  collagen type IV alpha
Organism
ppug  Pungitius pungitius (ninespine stickleback)
Pathway
ppug04510  Focal adhesion
ppug04512  ECM-receptor interaction
ppug04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:ppug00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    119222865 (col4a5)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    119222865 (col4a5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    119222865 (col4a5)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ppug04147]
    119222865 (col4a5)
   00536 Glycosaminoglycan binding proteins [BR:ppug00536]
    119222865 (col4a5)
Exosome [BR:ppug04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   119222865 (col4a5)
Glycosaminoglycan binding proteins [BR:ppug00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   119222865 (col4a5)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 119222865
NCBI-ProteinID: XP_037335713
LinkDB
Position
1:2412779..2435389
AA seq 1679 aa
MNRLLEAPRRLAAPLLLFALCVAVQRTDSAACHGCVGSTCDCSGVKGSKGERGFPGLTGQ
PGVPGFPGPEGPIGGRGEKGSDGPQGLYGPKGIRGPSGLPGFPGTPGLPGLPGQDGAPGP
RGVAGCNGTKGEIGYPGNSGIPGQPGRLGPPGLPGPKGDPGDVIPVNNFGSPGAEGLPGL
PGLPGAPGPSGLQGPIGPPGPRGYEGSPGPPGPPGPKGNMGLNFQGPKGMKGEQGTSGPP
GPPGQVGEQVGTKDSVIQRGDKGEPGFPGPSGDPGYPGPPGPSGGQKGTKGEPGEAGKRG
KAGKDGDPGPPGFPGGKGDPGPPGPAGRDGERGQKGDRGYPGPPGVVIGGGGGGLIGPKG
EPGYPGSPGIKGDRGPSGLSGPPGEPGRPATGGGGQSGPPGYPGERGQKGDQGPQGRTLP
GPPGRQGPSGLPGPQGLPGPPGSSSGGSDCASGVPGFPGVQGERGYPGEPGFKGEKGDTC
VNCFTDTSGIPGPPGPAGQPGFPGSPGSPGIKGDRGFSGTPGAVGPPGNPGPLGSPGFPG
EKGDPGEVITVDGVRGEKGDTGFPGSPGLPGLDGRPGRDGQPGAPGTKGAPGSLLVKGER
GPPGEPGSSGIPGDRGPPGSPGYGPPGSSGEKGVQGVSGRPGNAGFPGTKGEPGLAVGKK
GEPGQRGSPGSSGQPGLRGDPGQPGRDGFPGSPGGKGEPGLPGIGLPGPPGVKGFPGVAG
QPGSPAAPGRPGVDGLPGQPGFPGPKGEPGFGLPGPPGVPGSPGAKGFSGPKGDPGFPGG
PGSPGRSGFDGSPGFKGEPGLPGIPGARGPPGNPDAGAVGPPGPPGLPGQMGLPGNPGSN
GGKGDPGPPGLDIPGLPGDRGSPGFPGSPGAVGPPGPFGGPGRDGQPGLPGQKGDMGLMG
SPGPSGGPGIPGGPGAPGLKGDSGFPGRDGNPGGPGFKGDRGDPGLPGPPGQSTPPENLK
GSKGEPGQPGSPGFSGQKGIPGLPGDPGPGGSDGRPGQPGPPGPKGDSGFPGGPGATGPP
GLKGAMGEMGFPGPSGQKGLPGQPGRSGSPGQPGGSGFPGAKGEPGSAGVGPPGLSGQKG
EPGQSGFPGVSGLKGTPGSPGLPGIPGGPGPKGDPGLPGFQGSPGSPGPKGLDGGFGSPG
VPGAPGRPGESGRPGSPGFPGDKGQAGRDGIPGPAGIKGDPGLPGYGGPGSPGLPGLPGS
KGDPGLPGPPGVNGFPGSKGDAGFPGSPGPLGNPGPAGPPGQALQGPKGLQGSPGPPGRG
GSPGPQGPRGPAGSGGVKGEKGIPGASGQPGFAGQKGDSGVPGFPGPPGQPGGSGQKGDI
GLPGVPGFPGPKGDLGSPGGNGLPGDPGDVGSPGPPGDSVPSTYQKGAQGLPGPRGLTGG
RGLPGTPGRDGSPGAPGETGAPGPEGPPGFSGPPGRKGDSGPAGQPGQRGFSGPPGSDGP
PGVPGPPGSGSSAHGFLITRHSQGQEVPFCPQGTGLIYDGYSLLYVQGNERAHGQDLGTA
GSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPEPMPMSMAPITGEGIKPFISRCAV
CEAPAMVIAVHSQTIQIPSCPSSWEALWIGYSFMMHTSAGAEGSGQALASPGSCLEEFRS
APFIECHGRGTCNYYGNSYSFWLATVEPSEMFRKPQAETLKAGNLRTRVSRCVVCMKRT
NT seq 5040 nt   +upstreamnt  +downstreamnt
atgaaccgactcctggaggccccgcgacggctcgcggcgcctctgctcctcttcgcgctg
tgcgtcgcggtgcagcgaaccgactctgcggcttgccacggctgcgttggatccacgtgt
gactgcagtggagtgaaaggatccaagggcgagcgcggcttcccgggactcaccggacag
cccggcgtgccgggcttccccggacccgaggggccgatcggaggcagaggagagaagggg
agtgatggaccacaaggactttatggtccaaagggaatcagaggaccgtctggattgcca
ggatttccaggaacaccaggacttcccggtctgcccgggcaggacggagctccggggccg
agaggtgtggccggctgcaacgggacgaagggggaaattggttacccgggaaattccgga
attccgggacagccggggcgattgggcccccccggtctgccaggaccaaagggcgacccg
ggggacgtgatcccggtcaataactttggatcgccgggagcggagggattgcccggactg
ccgggccttcctggagctcctggaccctccggtctgcaaggtccaatcggtcctccagga
cccagaggctacgagggttctccaggtcctccaggccccccaggaccaaaaggaaacatg
ggattgaacttccaagggcccaaagggatgaagggggaacagggcacatccggacctcct
ggtcctccagggcaagttggagaacaagttggaacgaaagatagcgtgattcagagagga
gacaagggtgaaccaggtttcccggggccctcaggtgatccaggctacccaggaccccct
ggtccctcgggtgggcagaaaggaaccaagggagagccaggtgaagcgggaaaacgcggc
aaagcaggcaaggacggcgatcccggccccccaggcttccccggaggtaaaggggaccca
ggcccgccaggccctgccggcagagatggagagagagggcagaagggcgatcgtggatac
ccaggcccgccaggagtggtaatcggtggggggggaggaggtctgatcggcccgaaagga
gagcccggctaccccggctcacccgggatcaaaggagaccgaggcccatcaggcctatcg
ggacctccgggggaaccgggtcgcccggctaccggaggtggaggtcagtccggacctccc
ggctacccaggagagagaggccagaagggagaccagggcccccaagggcgtactttgcca
ggtccgccgggacgtcaggggccttctggtctcccgggcccgcaggggctccccggaccc
ccgggctcttcttccggaggatcagactgcgcctctggagtgcccgggtttcccggcgtg
cagggagagagaggctacccaggagaacccggatttaaaggcgaaaagggcgacacctgc
gtaaactgcttcacagacacttccggcatccccggaccaccgggacccgcgggacaaccc
ggattccctggatctcccggctccccggggatcaaaggagaccgaggattttcaggaacg
cctggggccgtcggaccccctggcaaccccggccctctcggttccccgggattccccgga
gaaaagggagacccgggcgaggtcatcacagtcgacggtgtcaggggagagaagggtgac
accggtttccccggatcgcccggccttcccggtctggacggtcgacccggtcgcgacggt
cagccgggggcccccggcaccaaaggagcacccggctctctgctggtgaaaggagaacga
ggcccccccggtgagcccggctcctcgggtataccgggagacaggggtcctccgggaagc
cctggttatggacccccgggatcatcgggagagaaaggagtccagggcgtctcgggaaga
cctggaaatgccggttttccaggtaccaaaggggaaccgggcctggcggtgggtaagaaa
ggcgagccaggacagaggggatctccgggctcgtctggacagcccggcttacgaggtgac
ccgggtcagcccggacgggacggtttccctggttctccgggaggcaagggagagcctgga
ctccctggcattggactcccgggacccccaggggtcaaaggattcccaggtgtcgcaggc
cagccaggatctcctgcagcaccaggtagaccaggagtagatggactccctggccagcct
ggatttcctggaccaaagggggagcccggatttggccttcctggccccccaggtgtacca
ggatcacctggagcgaaaggcttctccggaccgaaaggagaccctggcttccccggcggc
cctggctctcccgggcgctctggatttgacggctctccaggatttaaaggtgagcccggt
ttgccgggtatacctggagctcgtggcccacctggaaaccccgacgccggcgcagtgggg
ccgccgggaccacccggcctccctggccaaatgggactcccagggaaccccggatcaaac
ggagggaagggagaccccgggcccccgggtctagacatcccaggtctgccaggagacaga
ggaagtcccggcttcccaggttcccccggcgccgtcggaccgccagggccttttggagga
cctggacgggacggccagcctggtttaccgggtcagaagggagacatgggtctaatggga
tccccaggaccctctggaggaccaggaatcccaggagggcccggcgcccccggactcaaa
ggcgactctgggttccccgggagggacgggaatcctggcggtcccggtttcaaaggtgac
cgaggtgatcctggcctcccgggacccccaggacaaagcacgccaccggaaaatttgaaa
ggatccaaaggagaacccggacaaccaggttcaccgggtttttcaggtcagaaaggcatc
cctggtctccccggtgaccccgggcctgggggatccgatggacgtccaggacaacccgga
ccaccaggtcccaaaggagattctggcttcccaggtggcccaggtgctactggacctcca
ggactaaaaggtgccatgggagagatgggtttcccaggaccatcggggcagaagggtcta
cccggtcagcccggtaggtctggatccccgggacagccaggaggatccggtttccctgga
gccaaaggtgaaccaggctctgctggagtcggaccaccgggactatctggacagaaggga
gaaccaggtcagtcagggttcccaggagtttcaggacttaaaggaacacctggatcacct
ggtctcccaggcattcctggagggccagggcccaaaggtgaccccgggctccccggattc
caaggttccccgggtagccccggtcctaagggtctcgacggcgggttcggtagcccaggt
gtccccggagctcccggtagaccgggagaatccggccgaccaggatcaccagggttccca
ggagacaagggccaggcaggtcgggacggaatcccgggaccggccgggatcaaaggagat
ccagggcttcctggttatggtggacccggctctcctgggcttcccgggctgccaggttcg
aagggagacccgggtcttcccggcccgcctggcgtcaacggattcccaggatccaaagga
gacgctggtttccccggatctcctggtcctttaggcaaccctggtcctgccggacctcca
ggccaagctctgcagggccccaaggggctacagggatcccctgggccaccaggaagagga
ggctccccaggccctcagggtccccgagggcccgccggaagcggcggcgttaagggagag
aagggcatccccggcgccagcggacagcccggcttcgctggacagaagggagacagcggc
gttcccggattcccaggcccccctggtcagcccggtggttcgggtcaaaaaggagacatc
ggtcttcctggcgttcccggattccccggaccgaagggcgacttgggatcccccggagga
aacgggctccccggagaccctggagatgtcggatcccctggccctcctggtgactcggtt
ccatcgacctatcagaagggagcgcaaggactccccgggcctcggggcctgaccggtggt
cgaggacttcccggcacccctgggcgagacggaagtccaggtgctcccggtgaaaccggg
gccccgggtcccgagggtcctccgggcttcagcggcccccccggcaggaagggagacagc
ggaccagctggtcagcccggtcagcgtggcttctccggcccccccggttcagacggcccc
ccgggagtccccggccctccgggatcgggttcctccgcccacggcttcctgatcacgcgc
cacagccagggccaggaggtgcccttctgcccccaggggaccggcctcatctacgacggc
tactccctgctgtacgtgcagggcaacgagcgggcccacggccaggacctcggcacggcc
ggcagctgcctgcggcggttcagcaccatgcccttcatgttctgcaacatcaacaacgtg
tgcaacttcgcctcccgcaacgactactcctactggctgtccacgccggagcccatgccc
atgtccatggcccccatcaccggagagggcatcaagcctttcatcagcaggtgtgcggtg
tgtgaggctccggccatggtgatcgcggtgcacagtcagaccatccagatccccagctgc
ccctccagctgggaagccctgtggatcggatactccttcatgatgcacaccagcgcgggt
gcggagggctccggtcaggccctggcctcccccggctcctgcctggaggagttccgcagc
gccccgttcatcgagtgccacggcagagggacgtgcaactactacggcaactcctacagc
ttctggctggccaccgtggagccctccgagatgttcaggaagccccaggcggagaccctg
aaggcgggtaacctacggacgcgggtcagccgctgcgtggtctgcatgaagaggacgtag

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