Pungitius pungitius (ninespine stickleback): 119222884
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Entry
119222884 CDS
T07626
Symbol
si:cabz01101003.1
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD isoform X1
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04217
Necroptosis
ppug04622
RIG-I-like receptor signaling pathway
ppug04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
119222884 (si:cabz01101003.1)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
119222884 (si:cabz01101003.1)
04625 C-type lectin receptor signaling pathway
119222884 (si:cabz01101003.1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119222884 (si:cabz01101003.1)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119222884 (si:cabz01101003.1)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
119222884 (si:cabz01101003.1)
Peptidases and inhibitors [BR:
ppug01002
]
Cysteine peptidases
Family C67
119222884 (si:cabz01101003.1)
Ubiquitin system [BR:
ppug04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
119222884 (si:cabz01101003.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
EAD8
Motif
Other DBs
NCBI-GeneID:
119222884
NCBI-ProteinID:
XP_037335756
LinkDB
All DBs
Position
1:complement(2022125..2028094)
Genome browser
AA seq
966 aa
AA seq
DB search
MSGDHDQNRKRRPPKMFLISTDLKVQDQLDGTIVLQRGYICQEQDSGRSRGDSPWVKVLD
NDFMLKIERKYLLEIPSDLSGLLEPVYEPEARLKLLGSPGKLQQMLELPVESPLWVQVGS
QGELAEADLKYIGPLTRGSSAVFFGVQLKGSAAGSGTGNGSIKGHRLFSCPDACALFLPV
SHVRLRSWSSHSSSAAQERARERDQPHPLHRSGAYNPPSNGHHGNNERPPPQQQQQHGRH
ISFQQQRPGSPPQPPGAGVLSRTAEPAARGPASPAPLRVGQRVCFALESAVHGGEVRFCG
PLPGRSSSGPYVGVLLDAPVGNWDGVYKGEPLCHVPSALYGLLLPVSKVSPETRPHRQNP
PLQASRSILKPAAAPVTRPGPLSPPAAAAPKVALMPPGKTAPRPPPLPKPAHKAPPLPPP
KPCSPTTTTAPPPQQAANGAHGPPSPLRSPGGSEGEEAGARGELEVGSMVEVNDPPLFGV
IRWIGQIGGVPEPVAGIELDQELSAGTDGSYLGERHFRCPANKGLFVKLRNCRRDSRFPA
PETPVNQVERCNSIAFAEWGSERVEEHTPPTDGDAAADLYQGSKRGIQGHLNSCYLDATL
FSLFSCCSSADFVLFWPSDSVGQSDSSQAQDLLRCEIVNPLRRYGYVCASKTMALRRLLE
AANSDTGFTSQEKDPEEFLNRLFQLLRVEPLLKIRSMTLQPQEGHLYQLFPPTLPPSPRS
PPPLDSPVLLPSPPPSQMRVASVQSLLESSFLHAGLKFVEAPSCLLLLMPRFGKDFKMFD
AILPTLSLDVTDLLDDTLRQCSICQAVAEFECLQCYEDPDITPGHLKQYCQTCNTQVHSH
RKRESHVPASVSVPGGPWSDGQLCARQRMSLFAVTCIETSHYVSFVKHGPDAADWLFFDS
MADREGGENGFNIPRVKACPEVGRYLSLTPDQLRRVDPASLRESARRLLCDAYMCLYHSP
ELSLYK
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggggaccacgatcagaacaggaagcgccgcccccccaaaatgtttttgatctcg
accgacctgaaggtccaggaccagctggacggtaccattgttctgcagcgggggtacatc
tgccaggagcaggactccggcaggagcagaggcgactccccttgggtcaaggtgttagac
aatgacttcatgttgaaaatagagaggaagtacctgcttgaaatcccgagtgacctcagc
ggcctgctggagcctgtatatgaaccggaggctcgccttaaactcctaggtagtcccggg
aagctgcagcagatgttggagttgcccgtcgagtcccccctgtgggtccaggtgggctcg
cagggcgagctggccgaggccgatctcaaatacatcgggccgctgaccagggggagcagc
gcggtgtttttcggggtgcagctcaagggttcagcagcaggtagcgggacgggcaacggc
tccatcaagggccaccggctcttctcctgccccgacgcctgcgccctcttcctcccggtc
agccacgttcgcctgcgcagctggtccagccacagctcctccgccgcccaggagcgagcc
cgcgagcgcgaccagccacacccgctccaccgcagcggcgcctacaacccgcccagcaac
gggcaccacggcaacaacgagcgcccacctccgcagcagcagcagcagcacggccgtcac
atcagcttccaacagcagcgtcccggcagccccccccagccgccgggcgccggcgtcctc
tcccgaaccgccgagccggcggcccgagggccggcctcgcccgcgccgctccgcgtgggc
cagcgcgtgtgtttcgccctggagagcgccgtccacgggggcgaggtgcgcttctgcggc
ccgctgccgggccgctcctcgtcggggccgtacgtcggcgtcctgctggacgcccccgtc
ggcaactgggacggcgtttacaagggagagccgctgtgccacgttccctccgctctctac
ggactcctcctgcccgtctccaaggtctccccagagacgagaccccaccgtcagaacccc
cccctccaggcgagcaggtccatcctgaagccggccgcggcccccgtcaccagaccgggc
cctttgtcgccgcccgccgccgccgctcccaaagtcgccctgatgcccccgggcaaaacg
gcgcctagacctcccccgctgcccaaacccgcccacaaagccccgcctctcccgcctccc
aaaccctgcagcccgacgacgacgacggcgccgccgccgcagcaggccgccaacggggcg
cacggcccaccctcgccgctgaggtccccgggcggcagcgagggcgaggaggcgggggcg
cggggcgagctggaggtgggctcgatggtggaggtgaacgacccgccgctcttcggggtc
atccgctggatcgggcagatcggtggcgtcccggagccggtggcgggaatagagctggac
caggagctctctgcgggaacagacggcagttacctcggcgagcgccacttccgttgcccg
gccaacaaggggctgttcgtcaagctacgcaactgcaggcgggactccaggtttcccgcc
cccgagacacccgtcaatcaagtggagcgatgcaactccatagccttcgccgagtggggc
agcgagcgggtggaggagcacacgccgccgacggacggggacgcggccgccgatctctac
cagggctccaagaggggcatccagggtcacctgaactcctgctacctggacgccacgctc
ttcagtttgttctcctgctgcagctcagcggactttgtgttgttctggccgtctgactct
gtcggccagtccgactccagtcaggctcaggacctgctgcgctgcgagatcgtcaaccct
ctgcgaaggtacggctacgtgtgtgccagcaagaccatggcgctgaggcgactgctggag
gccgcgaacagcgacaccggcttcaccagccaggagaaagaccccgaagagttcctcaac
cggcttttccagctcctccgagtcgagccgcttctcaagatcagatcgatgactctgcag
cctcaggagggccacctctaccagctcttcccgcctacgctccccccctccccccgctcg
ccccccccgctggactcgcccgtcctcctcccctcgccgccgcccagccagatgagggtc
gccagcgtgcagtcgctgctggagtcctccttcctccacgccggcctcaagtttgtcgag
gctccctcctgcctcttgctgctgatgcctcggtttgggaaggacttcaaaatgtttgac
gccatcttgccgaccctcagcctggacgtcaccgacctgctggacgacactctccggcag
tgcagcatctgtcaggccgtggcggagttcgagtgtctccagtgttacgaggacccggac
atcacccccggtcacctcaagcagtactgccagacgtgcaacacgcaggtgcacagccac
aggaagcgggagtcccacgtgccggcgagcgtctccgtccccgggggcccgtggtccgac
ggccagctgtgcgctcgccagcggatgtctttgttcgccgtgacgtgcatcgagacgagc
cactacgtgagcttcgtcaagcacggccccgacgccgccgactggctgttcttcgacagc
atggccgaccgggaaggtggcgagaacggcttcaacatcccccgcgtgaaggcgtgtccg
gaggtgggccgctacctcagtctgacgccggaccagctgaggagagtggaccccgcctcc
ttgcgtgagtcggcccgccgcctgctgtgtgacgcctacatgtgtctgtaccacagcccc
gagctcagcctgtacaagtga
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