Pungitius pungitius (ninespine stickleback): 119222898
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Entry
119222898 CDS
T07626
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-3-like isoform X1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04080
Neuroactive ligand-receptor interaction
ppug04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119222898
04082 Neuroactive ligand signaling
119222898
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119222898
Ion channels [BR:
ppug04040
]
Ligand-gated channels
GABA-A
119222898
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
119222898
NCBI-ProteinID:
XP_037335797
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All DBs
Position
3:complement(26275040..26300916)
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AA seq
505 aa
AA seq
DB search
MFALHRVRQFRVLSALVVGSIVCCAKSVNEPGNMSFVKETVDKLLKGYDIRLRPDFGGAP
VAVGMSIDVASIDMVSEVNMDYTLTMYFQQYWRDKRLAYLGIPLNLTLDNRVADQLWVPD
TYFLNDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNCTLEIE
SYGYTTDDIEFYWKGGETAVTGVTRIELPQFSIVDYKLVSRNVVFSTGAYPRLSLSFKLK
RNIGYFILQTYMPSILITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRETLPKI
PYVKAIDMYLMGCFVMVFLALLEYAFVNYIFFGRGPQMQKKLAERAEKANNERAAKYDAA
REAGSRTASLKRSNQVRGLRHSRSAEPHGNILLTTLEIHNEVGAGEITTSLADIRNSQSM
VQLDSTASSHIQYRKQSGGIGPRSTSRHSLDRAAQMKRSRLRRRSSQLKIKIPDLTDVNA
IDRWSRIIFPSVFSLFNLIYWLYYV
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctctgcacagggtccgtcaattccgcgtcttgtccgcgctggttgtcggctcg
attgtgtgctgcgcgaagagcgtcaacgaaccgggcaacatgtctttcgtgaaggagacg
gtggacaaactcctaaaggggtacgacatccggctgaggccggactttggaggggccccg
gttgctgtcgggatgagcatagacgtggccagcatagacatggtgtcagaagtcaacatg
gactacacgttgaccatgtatttccagcagtactggagggacaagcgtctcgcctactta
gggatccccctcaacttgaccctggataacagggtggccgaccagctctgggtccccgac
acctacttcctcaacgacaagaagtcttttgtccacggagtcaccgtcaagaaccgaatg
atccgcctgcatccagacggaaccgtcctctacggcctcaggataactacaacggcagca
tgtatgatggatctcaggaggtacccgttggacgaacagaactgcactctggagatagaa
agctatggctacaccacggacgacatcgagttctactggaaaggaggcgagacggcggta
accggggtgacgcgaatcgaactgcctcagttctccatcgtcgattacaagttggtctcc
aggaacgtagtcttttccacaggtgcctaccctcgactgtctctgagcttcaagctaaag
aggaacattggctacttcatcctgcagacgtacatgccatcgatcctgattaccatcctc
tcctgggtctccttctggataaactatgacgcgtcagcagccagagtggctctagggatc
accacggtgctgacgatgaccacgatcaacacccacctgagggagacgctgcccaagatc
ccgtacgtcaaggccatcgacatgtacctgatgggctgcttcgtcatggtcttcctggcc
ctgctggagtacgccttcgtcaactacatcttcttcgggaggggtcctcagatgcaaaag
aagctcgccgagagggcggagaaggccaacaacgagcgggcggccaaatacgacgcggcg
agggaggcaggtagtaggaccgcgtccctaaagcggtccaatcaggttagagggcttcgc
cactcacgctcggcggagccgcacgggaacatccttctgaccaccctggagatccacaac
gaggtgggggcgggcgagatcaccactagcctggcggacatcaggaactctcagtccatg
gtgcagctggacagcacggcctcgtcgcacatccagtaccgcaagcagagcggcgggatc
ggcccgcgctccaccagccgccactccctggaccgcgccgcccagatgaagcgcagccgc
ctgcggaggcggtcctcgcagctcaaaatcaaaatccccgacctgacggatgtgaacgcc
atcgaccgctggtcacggatcatcttcccttccgtgttctcactgttcaacctcatctac
tggctctactatgtctga
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