Pungitius pungitius (ninespine stickleback): 119222915
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Entry
119222915 CDS
T07626
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-5-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04080
Neuroactive ligand-receptor interaction
ppug04082
Neuroactive ligand signaling
ppug04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
119222915
04082 Neuroactive ligand signaling
119222915
04519 Cadherin signaling
119222915
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ppug04040
]
119222915
Ion channels [BR:
ppug04040
]
Ligand-gated channels
GABA-A
119222915
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
119222915
NCBI-ProteinID:
XP_037335822
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All DBs
Position
3:26303417..26322803
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AA seq
481 aa
AA seq
DB search
MVVMDLHSALNNKVSRISVMARLVLSLLLLCGCRNSRCLSSTAAQKEAAGQKEAAAQKEA
AANDNSTVFTRILDGLLDGYDNRLRPGLGENVTEIKTDIFVTSFGPVSDTEMEYTIDVFF
RQSWKDERLCFKGPMTMLPLNNLLASNIWTPDTFFLNGKKSIAHNMTTPNKLLRLQDDGT
LLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPVSEVVYTWTKEADNSVVVAEDGS
RLNQYVLVGKNAETENIHTSRGQYTVMMAHFYLKRKIGYFVIQTYMPCFMTVILSQVSFW
LNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFAT
VNYFTKRSWAWDGKKALEAQHPKKRDPMVLSKKPNNVCSAGVNFTPNFTKDVSIATISNT
TSVQLRASETKMVDPKKTYNSVSKIDKMSRIVFPVLFGTFNLVYWATYLNREPMLKGVSS
T
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggatctgcattcagctctgaacaacaaagtgagcagaatttcagtcatg
gcgaggctcgtcctttccctcctgctcctgtgcggctgccgaaatagtcgctgcttgtcc
tccacggcggcccagaaggaggcagcgggccagaaggaggcggcggcccagaaggaggcg
gcggccaacgacaacagcacagtgttcaccaggatcctggacgggctcctggacggctac
gacaaccggctccggccaggactcggagagaacgtgacggagatcaagacggatattttt
gtcaccagcttcggcccggtgtccgacacggagatggagtacaccatcgacgtcttcttc
cgtcagagctggaaggacgagcgcctgtgcttcaaagggccgatgacgatgctgccgctg
aacaacctgctggcgagcaacatctggacccctgataccttcttcctcaacggcaagaag
tcgatcgcccacaacatgaccacgcccaacaagctgctgaggctgcaggacgacggcact
ttgctctacactatgagactgaccatatcagcagagtgcccgatgcagctggaggacttc
cccatggacgcacacgcctgccctctcaagtttggcagctatgcctatccggtgtcagag
gtggtttacacttggactaaggaagctgacaattcggtggtggtggcggaggacggctcc
aggctcaaccagtacgttctcgtcgggaagaacgccgaaacagagaacatacacacgagc
agaggccagtacacagtgatgatggcccacttctacctgaagaggaagattggatatttt
gtcatccagacctacatgccctgcttcatgactgtaatcctgtcccaggtgtcattttgg
ctaaacagagaatcggttccggcgaggaccgtctttggggtgaccactgtgctgaccatg
accaccctcagcatcagtgccaggaactccctccctaaggtggcctacgccacggccatg
gattggttcattgccgtctgctacgccttcgtcttctccgccctcatcgagttcgccaca
gtgaactacttcaccaagaggagctgggcctgggacggcaagaaggctctggaggcccag
cacccgaagaagcgagaccccatggtgctgtccaaaaagcccaacaacgtgtgctcggcg
ggcgtcaacttcacccccaacttcaccaaggacgtgtccatcgccaccatctccaacaca
acgtctgtgcagctccgggcctccgagaccaagatggtggacccaaagaagacctacaac
agcgtcagcaagatcgacaagatgtcgcggatagtgttccccgtcctgtttggaaccttc
aacctcgtctactgggcaacgtacctgaacagagaaccaatgttgaaaggagtgtcctca
acgtaa
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