Pungitius pungitius (ninespine stickleback): 119223121
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Entry
119223121 CDS
T07626
Symbol
sox19b
Name
(RefSeq) transcription factor Sox-19b
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119223121 (sox19b)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
119223121 (sox19b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
119223121
NCBI-ProteinID:
XP_037336117
LinkDB
All DBs
Position
1:11138132..11142815
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AA seq
306 aa
AA seq
DB search
MYSMMEHELKPTGQPPSHQTSQGMSPVTGNMTGGMGGNGNSHPGSKTACAPGVDPMDKVK
RPMNAFMVWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRAVHM
KEYPDYKYKPRRKTKPMLKKDNQVGKYPLSAGSLLAAAQGQGGSPRMDSYGWGPTGGYAG
MQSEALGYTQQLHRYDLSALQYPPSMSAAQSYMNGGNSYSPMSYSSSPQQPSPVTMSMVK
AEPGPHSPTTGTPNHHRGPLQGDLRDMISMYIPGPGGDGGDPTGAQRGYTSVQQHYLSGT
VPLTHI
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatggaacacgagctgaagcccaccggccagcccccgtctcaccagacc
tcccagggaatgtcaccggtcaccggcaacatgaccgggggcatgggcggcaatggcaac
tctcacccgggctctaaaactgcttgcgcacccggagtcgaccccatggataaagtcaag
cggcccatgaacgccttcatggtgtggtccaggggccagaggcgcaagatggcccaagaa
aaccccaaaatgcacaactccgagatcagcaagcggcttggagccgagtggaagctgctg
accgacgccgagaagcggcccttcatcgacgaggccaagcggctgcgggcggtccacatg
aaggagtaccccgactacaagtacaagccacgccgcaagaccaagcccatgctcaagaag
gacaaccaggtgggcaagtacccgctgtctgccggtagcctgctggcggcggcgcaaggc
caagggggcagcccgaggatggacagctacggctggggccccaccggagggtacgccggc
atgcagagcgaggcgctcggctacacgcagcagctgcaccggtacgacctgtccgctctc
cagtaccccccctcgatgtcggcagcgcagagctacatgaacggagggaactcgtacagc
cccatgtcctacagcagcagtccccagcagccgagccccgtcaccatgtccatggtgaaa
gcagaaccggggccccactctcccacgacggggacgcccaaccaccaccgaggccctttg
cagggtgacctcagggacatgatcagtatgtacatccctggacctgggggggatgggggg
gaccccacgggtgcacagaggggctacaccagcgtccagcagcactacctctctggaacc
gtcccgctcacacacatctag
DBGET
integrated database retrieval system
