Pungitius pungitius (ninespine stickleback): 119223229
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Entry
119223229 CDS
T07626
Symbol
ccdc187
Name
(RefSeq) coiled-coil domain-containing protein 187 isoform X2
KO
K25949
coiled-coil domain-containing protein 50
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119223229 (ccdc187)
Membrane trafficking [BR:
ppug04131
]
Autophagy
Other autophagy associated proteins
Others
119223229 (ccdc187)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
119223229
NCBI-ProteinID:
XP_037336306
LinkDB
All DBs
Position
1:complement(34826413..34839636)
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AA seq
782 aa
AA seq
DB search
MAEVEIDQSNLPRVQEVRQCFAVLEDGALAHNLQEQEIEQYYTTNIQKNQLVQNDIRIAK
RLQDEEEEEQAQQSTLHRQSSRRLEMEDFEYARLIQEEIQRCAEEARRREQDDKEIAKQM
QEEEKKRIARISRGRDGYDEGRTVDPALPSPRQHTLTSLHQGEVQYSPTTTRWHYSTSHN
HSDLTRPPAYSPRGEAAQKNTTSWSNQGHPDSIRGNARERLSEDSEHSDTAFSEQHSTCS
QRLIERLDTAPPRRRASLYQPPGRNYRSLYSRCSYTEEDRGERTENHNESGDLERRNPRT
LDEEGDRGEADVRERRSSRSKSVRLHDRRKPGNGDLARTWSCSENPDKHVRFQDNARSSH
RPHGEPLHVWEMLGQVLRERGVPVRFGSQGAPLQIRPPSKDSQVLRGGEASCGDSRPHQG
AFRRAAATRHSFHGDIREGKRYPENSGRDHRDWQSKDRSLNEISSRGSHHAQGERGGSGR
WNDGSSERNANNYRVERTSSQRRLFRHETIEEGLSPQEEGREAGVRVERPPGRASQRTRS
LSSSRASHGDRWRRAAAGAPQRPEPGGASLDLRQLRQVLQDEELAHKLQEEEKRLLRRNS
QSSPCVSYPEGDFRVAQVAQDEEIAHFMQKQEIKSERRSRELEGPASWREHTAMISGRAA
RDRPVHRERLDSEGLPSPTEDSSPENQPPSPFSTIPQVQQFRNIAEELDPTFQVARPSTE
GLGGGPEGTVNGTDGPTCQSLTLPQSGFNESLKEATFIPPTKRKTDKSGRAKSKMKENCK
HQ
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggtggaaattgaccagtccaaccttccacgtgtccaagaagtgcgccagtgt
ttcgctgtgctggaggatggagcgctggcacacaacctgcaggaacaggagattgagcag
tactacacgaccaacatccagaagaaccagctggtgcagaacgacatccgcatagccaaa
aggctgcaggacgaggaggaagaggagcaggcccagcagagcaccctgcacagacagtcc
tccagacggctagagatggaagactttgaatatgcgcgtctaattcaggaggagatccag
cgctgtgctgaagaggcccgaaggagggagcaggacgacaaggaaatagctaaacaaatg
caagaagaggagaagaagagaatcgcaaggataagcagagggcgagatggctacgatgaa
ggccgcactgtcgaccctgcactaccgtccccacgccagcacacactcactagccttcac
caaggggaggtgcagtactctcctaccaccaccaggtggcattactccacctctcacaac
cattcagacttaactaggcctccggcttactcccccagaggggaagcagctcagaaaaac
acaacttcatggtcaaatcaaggacaccccgactccatcaggggaaacgcgagggagcgt
ttgagtgaggattcagagcactcggacaccgccttctctgaacagcactccacctgttcc
cagagactgattgagagactcgacacggcacctcctcgacggcgggcatctttatatcag
ccgccagggaggaactaccgaagtctttactctcgctgcagctacacagaggaggataga
ggagagaggactgaaaaccacaatgaaagtggggacctagagaggaggaaccctaggact
ttggacgaagaaggggaccgcggcgaggctgatgtcagagagaggcgatccagtcgcagt
aaatctgtccggctacacgaccggaggaaacccggcaacggagacttggcgaggacctgg
agctgttcggaaaacccagacaaacatgtgcgatttcaggacaacgccaggagctctcac
aggccgcatggggaaccgctgcacgtctgggagatgctgggccaggtcctcagagagagg
ggcgtgcccgtgaggtttggcagccagggggcgccgcttcaaataaggcctccgagcaaa
gacagccaggtgctccgcgggggcgaggcctcctgcggtgactcccgaccacatcaggga
gccttccggagagctgccgccaccaggcacagtttccatggagatatcagggaggggaag
cgatacccagagaacagtgggagagatcacagggactggcagagcaaagacagaagtctt
aatgagattagtagcagaggctcccatcatgcacagggagaaagggggggcagcggacgg
tggaacgacggcagcagcgagaggaatgcaaacaattacagggtcgagaggacatcgagc
caacggcgtctgtttcgccacgagaccatagaagaagggttaagcccgcaggaggaaggg
cgggaggcgggggtgagggtagagcgcccccccggaagagcctcacagcgcacccgcagc
ctcagcagcagccgggcttcacacggggacaggtggaggcgcgcggcagcaggagcgccg
cagcggccggagccgggcggggccagtctggacctgcggcagctgcgccaggtgctacag
gatgaagaactggctcacaagctgcaggaggaggagaaaaggctgctgagaaggaactcc
cagagctctccatgcgtttcctacccagagggagacttccgagtagcacaagtggcccag
gatgaggaaattgcacactttatgcagaagcaggaaataaagtcagagcgaagatctcga
gagctcgaaggtccggcgtcgtggcgcgagcacacggcgatgattagcggtcgggctgca
agggacagaccggtgcatcgagagcgactcgactcagaaggccttccttcccccactgag
gacagctccccagagaaccagccacccagccccttctccacgataccacaagtccagcag
ttccgaaacattgcggaggagctggacccgaccttccaggtggcgagaccgagcacagag
ggcctcgggggggggccagagggcaccgtaaacgggacagatggtccgacctgtcagtca
ctcacattgcctcaaagcggcttcaacgagtcactcaaggaggcgactttcatcccaccc
acaaaacgcaaaacggacaaatccggacgagccaaatccaaaatgaaggaaaattgcaag
catcaataa
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