Pungitius pungitius (ninespine stickleback): 119223278
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Entry
119223278 CDS
T07626
Name
(RefSeq) RNA-binding protein 4B-like
KO
K13187
RNA-binding protein 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ppug03041
]
119223278
Spliceosome [BR:
ppug03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
119223278
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_occluded
RNA_bind
Calcipressin
RRM_MARF1
RRM_7
Motif
Other DBs
NCBI-GeneID:
119223278
NCBI-ProteinID:
XP_037336391
LinkDB
All DBs
Position
1:complement(10108971..10111621)
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AA seq
346 aa
AA seq
DB search
MVKIFVGNLPREADQEEIKALFSEHGTVTECAIIKNYAFIHMDDRKAATKAIKVLHLHKL
HGTPINVEASHGKNQGSVKLHVANVEKGADDELRALFEEYGSVTECAVVKNFAFVHMSNS
DEAMDAIKGMDNTEFQGKRIHVQISKSRPRHDEREDYPPPPPDRGGYWPPHYPGERHEPP
PPGYMRGRLGPMPPGYPAPPLPPPPPRRAVYPERPYEGDRERYGVVDYYEKYRARPYGMA
PYEDQRAGAPPPPPPPSAVARDRLMPSPLDPYERRPLPPPPASYYPRDRSPLRRAPAVPM
PPANNGFPYERSRLSPVSRVPGYGVPRPRDPYAERLPPPPPARYAY
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagatttttgtgggaaaccttcccagagaggcggaccaggaggaaatcaaggca
ctgttttctgagcatggcacagtcacagaatgtgccatcataaagaactatgccttcatc
cacatggatgaccgcaaggccgccaccaaggccattaaggtcctgcacctccacaagctt
cacggcacaccgatcaacgtggaggccagccatgggaagaaccagggctcagtcaaactc
cacgtagctaacgtagaaaagggcgcagacgacgagctccgtgctctctttgaagagtac
ggctcagtcacagagtgtgctgtagtcaagaattttgcttttgttcacatgtccaactct
gacgaggccatggatgccatcaagggaatggacaacactgaatttcaaggcaaacgcatc
catgtccagatttctaagagccgtccccgacatgacgaacgggaggactaccctcctcct
cccccagacaggggtggctattggcctcctcactacccaggagagaggcacgagcctccc
ccaccgggctatatgagaggccgcctcggccccatgcccccaggttaccccgctcctcct
ctgccgcccccaccgcctagacgagcagtttatcctgaacgtccctacgagggggacaga
gaaagatacggcgttgtagattactatgaaaaatacagagctcgtccgtatggcatggct
ccctacgaggaccagcgtgccggcgcccctcctcctccccctcccccctcagccgtcgcc
cgagaccgtcttatgccctcgccgcttgacccgtatgagcgtcgtcccctcccaccaccc
ccggcttcgtactacccccgagatcgcagtcctctaaggagggcgcccgccgtgccaatg
ccccccgctaataacggcttcccctacgagcggtctcgtctcagtccggtttcccgagtc
ccgggatacggagttccacgccccagggacccctacgcagagcggctgcctccgccacca
cctgcccgatatgcttattaa
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