Pungitius pungitius (ninespine stickleback): 119223311
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Entry
119223311 CDS
T07626
Symbol
rtel1
Name
(RefSeq) regulator of telomere elongation helicase 1
KO
K11136
regulator of telomere elongation helicase 1 [EC:
5.6.2.3
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ppug03032
]
119223311 (rtel1)
Enzymes [BR:
ppug01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
119223311 (rtel1)
DNA replication proteins [BR:
ppug03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
119223311 (rtel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
ARCH_RTEL1
HHD_RTEL1
ResIII
DEAD
EFG_C
Motif
Other DBs
NCBI-GeneID:
119223311
NCBI-ProteinID:
XP_062422265
LinkDB
All DBs
Position
1:35645415..35661704
Genome browser
AA seq
1240 aa
AA seq
DB search
MPSLTVNGVTVNFPFAPYDCQKDYMGKVIECLQKKKNGVLESPTGTGKTLCLLCATLAWR
EHFKDTISARKIAEKLQGQEMFSNTPMSSWGTAATDGATPVYYTDVPKIIYASRTHSQLA
QVIGELKNTSYSPKVCVLGSREQLCINKEVMRQESNHVKVHMCRGMVSTRSCVYYTNVEE
HTTDRDLVNSILDVEDLVKFGTKQRVCPYYLSRSLKQQADVIFMPYNYLLDPKSRRAHNI
ELNGAVIIFDEAHNVEKTCEESTSFDLTPYDVASAISAVDKLLLEQAKEATVSEDLNVEN
LSSGLKINIESIGKIKQILLHLEAVIDSYDVPSDKGFTKAGIFIYELLERAQLTYHSKTA
VYEALEEIIGHLTGQPGIFLNTSGLQKLADIIQLVFVGEPSEKQTQQQLMESNTAHFKVH
IHREKSFHKKPQSTDVWSSSSSKKQGNILSYWCFSPGFSMQDLKSQGVRCIILTSGTLSP
LSSFTCEMRIPFPVSLENGHVIERDQIFVGIIERGPDGVHLSSAFDRRFLPENMASLGNT
VANLSRVVPDGLLVFFPSFPLMEKTLDFWRTNGHAERIESVKPMFVEPKGKGTFNEVIDG
YYQKVNDPTSKGGTFFAVCRGKASEGLDFADTFGRGVIITGLPFPPKMDPRVVLKMQFLD
EMSRKKTPGVKYLSGQEWYKQQAFRAVNQAIGRVIRHKDDYGAILLCDQRFKGSSARAQL
PSWVRPYVRLYESFGNVIRDVSQFFRVANKLRPVAEKTSAARRQETICSPDTPSPAFPSC
SSSQSSCTQKAKQLDAHLPSLKRRRLNEHSVANGMARICIEYESEVQESPRRPANLLDAL
EHGPHREGGDPDAAAGVEKANHLSTLSLQCDKRMADEMRGGKRKIKLVQEQTLRGSEGVS
GDGSSSSRIKGFLAEMKRSLSQFSFERIIQALQTYKKNDEVEALLAEAAVLTEDANTHHL
LRGLYQFVRPHHKKRFDERCQQLTGQGCGYKPDHALSVEEKKALMLQSAAVGPTSSTCSQ
LNTQQLNKGGGHLHQQGPRAPETAAVGPTSSTCSQLNTQQLNKGGGHLHQQGPRAPETAA
VGPTSSTCSQLNTQQLNKGGGHLHQQGPRAPETGFASKRDVPAAFLADVKKAIGEEKSTL
LFQAIQSYKKTDNYEELVSTVVSIFTERDEDFNLLIRFCMFIPTRHKKRYKEMLDALKGQ
SISAADVPASSEDLQSSASSSPPFKTQSKTSSFFSGSQRK
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgccttcactgaccgtcaatggagtgacggtgaatttcccctttgctccgtacgactgt
cagaaggactacatgggcaaagtgattgagtgtcttcagaagaagaaaaatggggttctg
gagagtcccacaggcactggtaaaactctgtgcctgttgtgtgccaccctggcctggaga
gagcacttcaaggacaccatctctgcccgcaagatagcagagaagttacaagggcaggag
atgttctccaacacacccatgtcctcctgggggacggctgctacggacggggccacgcca
gtctactatacagatgttcccaagatcatatacgcttccaggactcactctcagctggcg
caggtcatcggtgagctgaagaacacgtcgtacagtccaaaggtgtgtgtgctgggatca
agggagcagctgtgtatcaacaaggaagtgatgcggcaggagagcaaccacgtcaaggtc
catatgtgcagaggaatggtttccaccaggtcatgtgtctactacactaacgttgaagag
cacacgaccgacagagatctggtgaactccatccttgatgtggaagacttggtcaaattc
ggtaccaagcagagggtctgtccttactacctgtcccggtccttgaagcagcaagcagat
gtgatcttcatgccttacaactacctgctggatccaaagagccgcagagctcacaacatc
gagctcaacggagctgtgatcatctttgatgaagctcacaatgtggagaagacttgtgaa
gaatccacttcgtttgacctcactccttacgatgtggcctcagccatcagcgctgtggac
aagctgctgctggagcaggctaaagaagccactgtctctgaggacctcaatgtggagaac
ctcagctctggtttaaaaataaatatagaaagcatcggtaagatcaaacagattcttctg
catctggaggctgtcatcgattcctacgatgttccaagtgacaaaggcttcaccaaagct
ggcatcttcatctatgaactattggagcgagcccaactgacctaccacagcaagacggct
gtgtatgaagctctggaggagatcattggacacctaacaggacagccgggaatattcctg
aacactagtggactgcagaagctggccgatatcatacagctggtgtttgttggtgaacct
tcagagaagcaaacgcagcagcagctgatggagtcaaatacggctcattttaaggttcat
atccaccgagagaagagctttcataagaaaccacaaagcactgatgtatggtcttcatct
tcatcaaagaaacaagggaacatcctgagctactggtgcttctctccaggcttcagcatg
caggacctgaagagccaaggtgtgcgctgcatcatcctgaccagcggaacgctctctccc
ctctcctcattcacctgtgagatgaggatcccgtttcctgtcagtctggagaacggccat
gtgattgagcgggaccagatctttgttggcatcattgaacgaggtccagatggcgtgcac
ctgagttcagcgtttgatcgcagattccttcctgaaaacatggcgtctttaggcaacact
gtggctaacctcagccgtgttgttcctgatgggcttttagtgttttttccctccttccct
ttaatggaaaaaaccctggacttctggagaaccaacgggcatgcagagcgcattgaaagt
gtgaagcccatgttcgttgagcctaaaggaaaaggcacctttaacgaggtgattgatgga
tattaccaaaaggtcaatgacccaacatccaagggggggacattctttgctgtgtgtcga
ggcaaggcgagcgaaggtctggactttgcagacacctttggtcgaggcgtcatcatcacc
ggccttccgttccctccaaagatggacccccgagtcgtcttgaagatgcagtttttggat
gagatgagtcggaagaaaactccgggggtgaagtacctgtctggacaggagtggtacaaa
cagcaggctttcagagcggtgaaccaggccatcggtagagtcattcggcacaaggacgac
tatggagccatcttactgtgtgatcaaaggtttaaaggctccagtgcgagggcccagctc
ccatcgtgggtccggccttacgtgcgtctttatgaaagcttcgggaacgtgatccgggac
gtctctcagttcttcagggtggcaaacaaactgaggcctgtggcagagaagacgtctgca
gcacgccgccaggagacaatctgctccccagacacaccgtcccctgccttcccttcctgc
tcatcctcccaaagcagctgcacccagaaggccaagcagctggacgcccacctccccagc
ctgaagaggaggaggctcaatgaacactctgtagccaatggaatggccaggatctgcatc
gagtacgagtctgaggtgcaggagagtccgaggagaccagccaacctgctggatgctctg
gagcatgggccccaccgcgaggggggggaccctgatgctgccgctggagtagagaaggca
aaccatttgtccacgctgtcccttcaatgtgacaagaggatggctgatgaaatgcgggga
ggaaaacgtaaaatcaaactggtccaggaacagacgctgcgtggatcagaaggtgtctct
ggggacggttcctccagcagcaggattaaagggttcctggctgagatgaaaaggtctctg
agccagttcagctttgagcgcatcatccaggctctgcagacctacaagaagaacgacgag
gtggaggccctgctcgctgaggccgctgtcctcactgaggacgccaatacccaccacctg
ctgcgaggcctctaccagtttgtccgcccacatcacaagaagaggtttgatgagcgatgt
caacagctgactgggcagggctgtgggtacaaacccgaccacgctctgtctgtggaagag
aagaaagccctgatgctgcagagcgctgcagtgggtccgacctcctccacctgcagtcag
ctgaatacacagcagctcaacaaaggaggggggcacctacaccagcaggggccgagggca
cctgagacagctgcagtgggtccgacctcctccacctgcagtcagctgaatacacagcag
ctcaacaaaggaggggggcacctacaccagcaggggccgagggcacctgagacagctgca
gtgggtccgacctcctccacctgcagtcagctgaatacacagcagctcaacaaaggaggg
gggcacctacaccagcaggggccgagggcacctgagacaggttttgcttcaaagagggac
gtccctgctgcctttctggctgatgtgaagaaagcaattggagaagagaaatccactctg
ctctttcaggccattcagagctacaagaagacagacaattatgaagagctggtgagcaca
gtagtgagcatattcacggagagagatgaggacttcaaccttcttatcaggttttgcatg
tttattcccactcgccataagaagcgctacaaagagatgttggatgctttaaaaggtcag
tccatctctgctgcagacgttcctgcctcgagtgaagacctgcaaagctcagcgtcgtca
tcaccgcctttcaagactcaaagcaagacttccagttttttctccggcagccaaaggaag
tag
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