Pungitius pungitius (ninespine stickleback): 119223333
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Entry
119223333 CDS
T07626
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119223333
Membrane trafficking [BR:
ppug04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
119223333
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_1
SH3_1
TPR_8
TPR_7
TPR_NPHP3
SH3_9
TPR_9
TPR_10
Motif
Other DBs
NCBI-GeneID:
119223333
NCBI-ProteinID:
XP_037336483
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All DBs
Position
1:complement(11526844..11545059)
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AA seq
1346 aa
AA seq
DB search
MVRRGLLTGDRGDLTVLLGNYLSARSNRDGGYRRKMSADGLQHRQVAEKTNRHSRKVHGF
TRDSSCLRRTVSTCEEKVPTALPLLLDVVSGPERLPADEDSQEMLRGKLRNLQADSPEVN
ALFTELGIHLISIDSEEKVIYVTFKTFEEIWKFTSYYSIGFLGHCMENLLWDPKFWLSSL
EEDIAIKVSVQEDSLHLIYKGILMQEGSLFARCSTNQMFDSSTSGGDLYLEKGDIAQFEP
PFLGSGWTVLCLADGARGTAPRPGLELVVPFHQWFLKSCPESILIGDGKPSCDFPLHFAS
GTCLATSGYDAEGPDELSVTPGDRIIIVGILVSCCDWFTARKEATGEVGLVKTSLVKPST
DIHNSEDFFLDGEEVTFFNLQEDKAIEETNALLKKKSQNDPGHSYKLDMISYQDADKKIP
SSSSGKLHTQLTDLKTNIQRFLDPGRESLPPSIVTMNGTLEDADLASEAKKTSPPCFTVH
PVVEGDNNTEIFILLFSFLEGQDYKIEFGPLYRLSSELLASSIFTGHSGEDDLIAFLGVA
RETARKKRLLWSQTRLCFLLGKLCAGRSKFSQARVYFEEALGVPQEGFADLRLLASIYSN
LVAVYLLQKNTESFFAMTERLVALLFGTPDCLECLVDNSALKYILKKAVLSHNKMAEARA
CHLLAKHHWTHAEGVRVVPYLERLLVLSTEAQRTWGISTSHEYLALGRLYSELRLPHLSV
SSARRASQHPSATLTNCLSSMALLLSNVNRLNGTPEQEVTLPPQVAPYLHQALSSKKVQD
GRSDRQHVLSHQLTVSLCQLFCKHRMVGHAIGHIHTLIDSDGLPQRLPISVPERNSTLIW
LAWLHIENKQPDVALDILDSVLASMPEHCTTLQEGVVLNMRGVAFRCMGDLRRAAESYEA
AVDVCQEYEDMPNWAVAQANLGLLCLKARAKDLAQRHLTEAVQLFSELDGEGHESNFITV
LLELGQHYVKQHQLDFGKGCYEWALLLAINANLLDCQLTATRHLYHLYGCENPDQAQCII
YSQHQVQLLRQTGDRGREGEALEAISQLYLTLGTERAYKAALDDTKTSLGIFIDLGWREK
EAYGWLQAGKIYHLVNQTELVDLYVQVAQDVALSTGDTGFILKLLEAAGDIFFNSSKDRD
KAITFYRDRALPIAVKSSNVRSRLRLCNKLTELMLSLKLYGEAVEFAQTSLDISQTLGEC
LNERVACHRLASLYHCLDQYELAEHYYLKTLTLCPTSLLFGEETLYYVRVYLTLGDIIFY
DLKDPFDASGYYHLALAAAMDLGNKKSQLQLCTRLATIYHNFLIDRELSLFFYQKARAFA
AELNVRRINISPDQLNSSTSQYETTK
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggcggggactgctcactggggaccggggagacctcacagttctacttggaaac
tacttgtcggccaggtcaaaccgagacggcgggtaccggagaaagatgtctgcagacggc
ctgcagcaccggcaggtggcggagaaaacgaaccgacacagcagaaaagtgcatggtttc
accagagattcttcatgtctgaggagaactgtgtcaacatgtgaggaaaaagtcccaaca
gctctgcctctgctgctggatgtggtgtcgggtccggagcgtcttcctgcagacgaggac
tcacaggaaatgctaagagggaaactgcgcaatctgcaagctgacagcccagaggtcaac
gctctgttcacggagctgggcattcacctcatctccatcgacagtgaagagaaagtcatt
tatgtgacattcaaaacatttgaggagatatggaaattcacctcatattattcaataggt
ttcctgggtcactgcatggagaatctgttgtgggacccgaagttttggctcagttctttg
gaggaggacattgcaatcaaggtctctgttcaggaggactcactccacctgatctacaaa
ggcatcctcatgcaggaaggttctttgtttgctagatgtagtaccaaccagatgtttgac
agctccacctctggaggtgatctgtacctggaaaagggagacatagcccagtttgagcct
ccgttcctgggctccgggtggactgtcctctgcctggccgatggagcccgaggtaccgca
cccagacctgggcttgagctggttgtcccttttcatcaatggtttctcaaatcctgccca
gagagcattttaattggtgatggtaaaccctcctgtgacttccctctgcactttgcctca
ggaacctgtctggccacatcagggtatgatgctgagggcccggatgagctgagtgtgaca
cccggtgatcgcatcatcatcgttggaatcctggtgtcttgttgtgattggttcacagcg
aggaaagaggcaacaggagaagtgggtttggtcaagacaagcctggtgaaaccgtccact
gacatccacaattcagaagatttttttctggatggagaggaagtgacattcttcaatctg
caagaggacaaagccatagaagaaaccaatgccttattgaagaagaaatctcaaaatgat
cctggtcatagctacaaacttgatatgatcagttaccaagatgctgataaaaaaatacca
tccagctcttcaggcaaacttcatactcagctgactgacttgaagacaaatattcagagg
tttcttgaccccggacgagagtcattgcccccatctatagtgaccatgaacgggacttta
gaggacgctgacctggcctcagaagcaaaaaaaacaagtcctccctgtttcactgttcac
ccggtggtagaaggagacaacaacacagaaatcttcattctgcttttctctttcctggag
ggacaagactacaaaatagagtttggccccctgtacagactcagttctgaactcctggcc
tcctccatctttactggtcactcgggagaggatgatctgattgctttcctgggtgttgcc
agggaaacagccagaaagaagcgactcctttggtcacagactcgtttgtgctttctgctg
ggtaagctctgtgctggaagatccaaattcagccaggctcgggtttactttgaggaggct
ctcggcgtgccacaagaaggctttgcggacctcaggctgttggccagtatctactccaac
ctggtcgccgtataccttttgcagaaaaatacagagagtttctttgctatgacagagcga
cttgttgcattgctattcgggaccccagactgcttggaatgcctagtggacaactcggct
cttaaatacatcctcaagaaagccgttctgtcccacaacaagatggcagaggcccgggct
tgtcatctactggcgaagcaccactggactcatgctgaaggggtacgagttgttccttat
cttgagagactgcttgttcttagcactgaagcacaaagaacgtggggcatctcaaccagt
catgaataccttgccctgggaaggctctacagcgaactccgacttccccatctcagtgtc
agctcagcaaggagagcttctcagcatccctctgctacactgacaaactgcctcagcagc
atggctctactattgagcaacgtcaacagactgaatgggaccccagaacaggaagtaacc
ctcccacctcaagtggctccctatttacaccaagccctttcttctaaaaaagtccaagat
ggaagaagtgaccgacagcatgttttgagccatcagcttaccgttagtctctgccaactc
ttttgcaagcacaggatggttggacacgctatcggccacatacacaccctcatcgacagc
gatggactcccgcagcgactccccatctctgtcccagagagaaacagtaccctcatctgg
ctggcatggcttcacattgagaacaagcagccagacgttgccttggatatcctggactct
gtcctcgcttccatgcctgaacattgcactacccttcaggaaggcgtggtcctcaacatg
cgtggcgtggcatttcggtgcatgggtgacctccggagggcggcagagagctacgaggcg
gctgtggacgtctgtcaagagtatgaggacatgccaaactgggcggtagcgcaggctaac
ctggggctgttatgtctaaaggctagagctaaagatttggcacagagacacctgactgag
gccgtgcagctcttctctgagctcgacggagaaggccatgagtcaaacttcatcacagta
ctgctggagctgggtcagcactatgtgaagcagcaccagctggactttgggaaaggatgc
tatgaatgggctctactgctggctatcaacgctaacctgttagactgccagctcactgca
actagacacctgtaccatctgtatgggtgtgagaatccagaccaggcccagtgtatcatt
tacagccagcaccaggtccagctgctgagacaaacaggagacagaggacgggaaggagag
gcgctggaagccatcagccagctctacctcactctgggaacagaaagggcatacaaggca
gccctcgacgacaccaagaccagtcttggtattttcattgacctgggctggagggagaag
gaggcgtacggctggctgcaagcgggaaagatctaccacctagtcaaccaaactgaactt
gtggacctttacgtgcaggtagctcaggatgttgctctgagtaccggagacaccgggttc
atcttgaagcttctggaagcggcaggagacattttcttcaacagcagcaaggaccgggac
aaggccatcactttctacagggaccgagctctgcccatcgctgtgaagagcagcaatgtt
cgttcccggctgaggttgtgcaataagttgacggaactgatgctcagtctcaagctttat
ggtgaagctgtggagtttgctcagacctcactggacatcagtcaaactctgggcgagtgt
ctgaatgagcgagtggcttgccatcgtctggcctctctgtaccactgtctggaccagtat
gaactagctgaacactattacctgaaaaccctgaccctctgtccaacctctctgctgttt
ggtgaagaaacactgtactatgttagggtgtacctgacgctgggggacatcatattctat
gacctgaaggatccatttgatgcttcgggctactaccacctggctctggccgcagccatg
gatctgggtaacaagaagtctcagctgcagctgtgcacccgcctcgcaaccatctaccac
aacttcctaatagaccgggagctctccctcttcttttaccagaaggcacgggcctttgcc
gcagagctgaatgtgaggaggataaatatctcaccagatcagctgaatagtagcacctca
cagtacgagaccaccaaataa
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