Pungitius pungitius (ninespine stickleback): 119223339
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Entry
119223339 CDS
T07626
Symbol
sort1b
Name
(RefSeq) sortilin 1b
KO
K12388
sortilin
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
119223339 (sort1b)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
119223339
NCBI-ProteinID:
XP_037336490
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Position
1:28843175..28855312
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AA seq
820 aa
AA seq
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MGPSLRALLLFSLSTLTAAVDFQLGAKASGRSFVKRPLVEQKAASIVKRSLPAWLSPSPD
HRIRRRSVELGENCRALQGYDTKLADNTHRHIFNDLSGSVSLAWVGDGTGVILALTTFQV
PFFMLRLGQSKLYRSENYGKSFEDVTSFINNTFIRSEFGIAIGNSGKVILTGEVSGGYGS
RIFVSHDFGKSFTPRDLAFVPMTQITYSPDDSNGLLALSSSNELWLSEDFGNNWKKIHDM
VCLVKWGRKNTIFFTANYNGSCNDRGMLELKRTTDYGKNIKTVASKIYSFGQGGRFLFAS
VMTGKGTLRMIHVSVDQGETWNMAQLPPVGHEQFYSILAANEEMVFMHVDEPGDTGFGTI
YVSDDRGTVYSKSLERHLYTTTGGDTDFTNATSMRGVFLTSVLAEDNSVHSVVSFDQGGE
WVPLRKPAYSKCDATARDPDECSLHIHAAYSIAMKLNVPMLPLTEPNAVGLILAHGSVGD
SMSMMKPDVYVSDDGGYTWIKALVGPHHYAILDSGGLIVAVEHSPNQPINKIKFSTDEGQ
CWGVYNFTVDPIYFTGLASEPGARSMNVSVWGYRDSLLSQHWISTTIDFKELLTRDCGDK
DYVQWLAHSDDISDPDDGCMLGYKEKFLRLRKDSVCWNGRDYQVNTEPTPCQCTLDDFLC
DFGYYRQENSSECVEQPDLKGKVLEFCLHGKEEKLQTNGYRKIPGDKCEGGNMEERKEID
LSVRCVSDLVAPELLIDSRSSNSAAIVTTVIIVMLLSVAAGVVLIKKYVCGGRFLVHRYS
VLQQHVEDNAADGMDDPLETNHTQHGKIEFHDDSDEDLLE
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgggaccgtcgctgcgcgcgctcctgcttttctccctgtccactctcaccgccgctgtg
gatttccagctgggagcgaaagcctcgggacggtcgttcgtgaagcgtccactcgttgaa
cagaaagccgcgagcatcgtaaagcggtccctgccggcatggctgtctccgtcacccgac
cacaggatccgacggaggagcgtcgagctgggcgaaaactgcagagctcttcaaggatac
gacaccaagttagcagacaacacccaccgtcatatcttcaatgacctgagtgggtcggtg
tcgctggcctgggttggggacggcacaggggtcatcctggcgttgacgacttttcaggtg
cccttcttcatgttaaggctcgggcagtctaaactctatcgaagtgagaactatgggaag
tcattcgaggatgtgaccagtttcatcaacaacaccttcatcagatcagagtttggcatc
gcaatcgggaactccgggaaagtgatcctgacaggagaagtgtccggaggttacggctct
cggatctttgtctctcatgacttcggaaagagtttcaccccccgggacttggccttcgtc
cccatgacgcagatcacatacagccctgatgattccaatgggctgctagccctcagcagc
agcaatgaactgtggctgtcggaggattttggcaacaactggaaaaagattcacgacatg
gtgtgtcttgtgaaatggggaagaaaaaataccatcttctttacagccaattacaatgga
tcctgcaacgatcggggaatgctggaactgaaaaggacgaccgactacggtaaaaacatc
aagaccgtcgccagtaaaatctactcttttggccagggtggacgcttcctgtttgcttcg
gttatgacaggcaagggcactctgaggatgatccacgtgtcggtggaccagggcgagacg
tggaacatggcccagctgcctcctgttggtcacgagcagttctactccatcctggcagcc
aacgaggagatggtcttcatgcatgtggacgagccaggagatacaggattcggcaccatc
tatgtgtcagatgaccggggcacagtgtactctaagtcactggagcgccacctgtacacc
accacggggggcgatacagacttcaccaacgccacctccatgcgaggagttttcctcacc
agtgttctggccgaagataactctgtgcattctgtggtgtcctttgatcagggaggagag
tgggttcccctgcggaaaccagcctacagcaagtgcgatgctacagccagagacccagac
gagtgcagtctccacatccatgcagcttacagcattgctatgaagctgaacgtccccatg
ctgcctctcactgaaccgaacgctgtgggtctcatcttggctcatgggagtgttggtgat
tcgatgtcaatgatgaagcccgatgtttatgtgtctgatgatggggggtacacctggatt
aaggccctggttgggccacatcactatgctatcctggactctggagggctgattgttgcc
gtggagcacagcccgaatcaaccgatcaacaagatcaaattttctactgatgaaggacag
tgctggggtgtttacaacttcaccgtagaccccatctactttactgggctggcgtcggag
ccgggagctcgctccatgaacgtcagcgtgtggggctacagagactccctcctcagccag
cactggatctccaccaccatcgacttcaaagagcttcttaccagagactgtggcgacaag
gattatgtacagtggttggcccactcagatgacatcagtgaccccgacgatggttgcatg
ctggggtacaaggagaagttcttgcgtctcaggaaggactctgtttgctggaatggacgc
gattaccaggtcaacaccgagccaaccccgtgtcagtgcaccctggatgacttcctgtgt
gactttggatactaccgtcaggagaacagctcagagtgtgtggagcagccagacctgaaa
ggcaaagtgctcgagttctgtctgcacggcaaagaggagaagctgcagaccaatggctac
aggaaaatccctggagataaatgtgagggaggaaatatggaggagcgcaaagagatcgac
ctcagcgtgaggtgtgtgagtgatctggtggcccctgaactcctgattgacagtcgctct
tccaactctgcagccatcgtgacaacggtcatcattgtcatgctgctgagcgttgcagca
ggagttgtcctcatcaagaagtacgtctgtggtggcaggttcttggttcacaggtactcg
gtgctgcagcagcatgttgaagataatgctgctgatgggatggacgaccctctggagacc
aaccacactcaacatggcaagatagagtttcacgacgactcggatgaggacctgctcgaa
tag
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