Pungitius pungitius (ninespine stickleback): 119223379
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Entry
119223379 CDS
T07626
Name
(RefSeq) parapinopsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
ppug04030
]
119223379
G protein-coupled receptors [BR:
ppug04030
]
Rhodopsin family
Vision
Opsin
119223379
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srv
7tm_4
TAS2R
Motif
Other DBs
NCBI-GeneID:
119223379
NCBI-ProteinID:
XP_037336562
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All DBs
Position
1:14079762..14082120
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AA seq
338 aa
AA seq
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MERGGNSSANAELLSPTGYTALAAIMGAFSAAGILLNVLVIVVTARHRQLRQPLSYALVN
LAVCDLGCAVCGGLPTAITSAMGYFSLGRAGCVLEAFAVAFFGIASLCTIGVISVERYVV
VCYPMGAVLFQTRHAVAGVVLSWVWSFVWNTPPLFGWGSYELEGVKISCAPNWYSRDPGN
MSYITIYFLLCFAVPFSVIMVSYSRLLWTLRQVTKLQVSDTGSTNRVEVQVARMIVVMVL
AFLVTWLPYAGMALAVILDSTLHIDPVIATIPVYLAKSSTVYNPIIYIFMNRQFRGYAVP
SVLCGWNPWAEEQTSEEETSVGSIMKSQKVSPKGSLQE
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtggtgggaactcctcggccaacgcagagctcctgtctccgaccggctacacc
gcgctggccgccatcatgggcgccttttcggcggccggcatcctcctcaacgtgctggtg
atcgtggtgacggcgaggcaccggcagttgaggcagccgctcagctacgccctggtcaac
ctggccgtgtgtgacctgggctgcgccgtgtgcggggggctgcccaccgcgatcaccagc
gccatggggtacttcagcctggggcgcgccgggtgcgtgctggaggccttcgccgtggcc
tttttcggcatagccagcctgtgcaccatcggagtgatttccgttgagcgctacgtcgtg
gtgtgctatcccatgggggcggtcctctttcagaccagacacgccgtggccggggtggtg
ctgtcctgggtctggtccttcgtgtggaacacgccgcctctcttcggctgggggagctac
gagctggagggcgtcaagatctcctgcgccccgaactggtacagccgggacccgggcaac
atgtcctacatcaccatatacttcctcctctgcttcgccgtgcctttctccgtcatcatg
gtgtcgtactcgcgactcctgtggacgctgcggcaggtgaccaagctgcaggtgtccgat
acgggcagcaccaaccgggtggaggtgcaggtggcgcgcatgatcgtggtgatggtgttg
gccttcctggtgacctggctgccgtacgccggcatggcgcttgctgtcatcttggactcc
acgttgcacatcgaccccgtcatcgccaccataccggtttacctggctaaaagcagcacc
gtctacaaccccatcatttacatcttcatgaacagacagttccggggatacgccgtcccc
tcggtcctgtgtgggtggaacccgtgggcggaggaacagacgtccgaggaggagacctcg
gtcggctccataatgaagagccagaaagtctcacctaaagggtctttacaagaatag
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