Pungitius pungitius (ninespine stickleback): 119223380
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Entry
119223380 CDS
T07626
Symbol
nr1h5
Name
(RefSeq) nuclear receptor subfamily 1, group H, member 5 isoform X1
KO
K08538
farnesoid X receptor beta
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119223380 (nr1h5)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
ppug03310
]
119223380 (nr1h5)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
119223380 (nr1h5)
Nuclear receptors [BR:
ppug03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
119223380 (nr1h5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
119223380
NCBI-ProteinID:
XP_037336563
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Position
1:complement(24188178..24197986)
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AA seq
501 aa
AA seq
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MREWTELEMSFSAGGFLCASDGYCSSEQLQYYDMLADPLAYPPLQDPDLQLLPCSQQQYT
PANLPFSLYGSPPSSTPSPSSSSSSSQPCHPSYHYSPHCMEAPCDPGLEPHSGVQAPGLG
MVGLPMGRRTRVMSGGKNRGQEELCVVCGDKASGYHYNALTCEGCKGFFRRSVTKKAVYH
CKSGGSCEMDMYMRRKCQDCRLRKCRAVGMLAECLLTEVQCQSKRLRKVGQVRGHKEEEN
AYNKRVSSTCRLPGQAPAASLTREQKHVVDRMVEAHQQYKGQDSSPCRLLEWSCAEEGGS
FSDGATPQLHRLLQFARTVPGFDLLDFSDQSSLLSASWLEVMFLLSAQQFSHNPNSPSPA
LQIFSMSTNNWLRNAESKENIHSRMPVNSGGSEDLFGPLLNFFHSMATLRVTEAEYTLLT
ATALLCSGQTSRPKHRASLQAASCVEKMQELILDLLSRVCGAQAGAARGGPQRFGRLLGR
LTELRTLRHNYLLLTRRQPGH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtggactgagttggagatgagcttttcggcaggagggtttctctgtgcctcg
gatggttactgctcatcagagcagctccagtattacgacatgctggctgaccctctggcc
tacccccccctacaggaccccgacctccagctgctgccctgcagccagcagcagtacacc
cccgccaacctgcccttctccctctatggctcaccaccctcctccaccccctctccgtcc
tcctcttcctcctcttcgcagccctgccatccttcgtaccactacagccctcattgcatg
gaggccccctgtgatcccggcctcgaaccccacagcggcgtccaggccccggggctcggg
atggtgggactgcccatggggcggcggacacgggtgatgtcaggagggaagaacagaggt
caggaagagctgtgtgtggtgtgtggagataaagcgtcggggtatcactacaacgctctc
acctgtgagggatgcaaaggtttctttcggcgcagtgtgaccaagaaggccgtgtatcac
tgtaagagtggcggcagctgcgagatggacatgtacatgaggaggaagtgccaagactgt
cgcctgaggaagtgtcgtgccgtgggaatgctggccgagtgccttctgacagaagtgcag
tgccagtccaaacgactgaggaaagtcggtcaagtcagaggacacaaggaagaggagaac
gcatacaacaagagagtcagctccacctgcaggctgccggggcaggctccggctgccagt
ttaacccgagagcagaagcacgtggtggaccggatggtggaggcgcaccaacagtacaag
ggacaggacagcagcccctgcaggttgcttgagtggtcgtgtgcagaagaaggggggagc
ttttctgatggtgcgacgccccaactgcatcgactgctgcagttcgccaggacagtgcca
ggttttgacctcctggatttctccgaccagagctctctcttgtcggcctcatggctggag
gtcatgttcctgctctcagcacagcagttctcccacaaccccaacagccccagtccagcc
ctgcagatttttagcatgtcgacaaacaactggctgagaaatgcagagtcaaaggaaaac
atccacagcaggatgccggtcaactcaggaggcagtgaggacctcttcgggccgcttctc
aacttcttccacagcatggcgacgctgcgggtgacggaggccgaatacactctgctcact
gcaaccgctctgctctgctcaggtcagaccagcaggcccaaacaccgtgcgtccctgcag
gccgccagctgcgtcgagaaaatgcaagaactgatcctggacctgctgtccagggtgtgc
ggggcccaggcgggagccgcccgcggggggccgcagcggttcggtcgcctgctgggtaga
ctgaccgagctacggacccttcgtcacaactacctcctcctgacaagacggcagccggga
cactga
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