Pungitius pungitius (ninespine stickleback): 119223381
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Entry
119223381 CDS
T07626
Name
(RefSeq) rho guanine nucleotide exchange factor 40-like isoform X3
KO
K23860
pleckstrin homology domain-containing family G member 4
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
119223381
Domain-containing proteins not elsewhere classified [BR:
ppug04990
]
Pleckstrin homology (PH) domain-containing proteins
Other PH domain-containing proteins
119223381
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
IQ_SEC7_PH
Motif
Other DBs
NCBI-GeneID:
119223381
NCBI-ProteinID:
XP_037336566
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All DBs
Position
1:26492584..26516577
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AA seq
2003 aa
AA seq
DB search
MNLDSLESSIQYLLSGLYPPFEATAPTLLSQLFQIIDSRYRGDALRCLLDFLVPAKRILE
TVQQAACAQYSDVLFLCEGWPLCLRDQVVIHLAPINPSLLQPGDFYLQVAPFCTQSARIL
VCSLLEEEGLIVEVVEETPILDTSYPCLFSCDWLKEINQGRHGRPLSQCLLATGRGVVRL
PWERVAVPDFVDVPLCAGSSMASAPHTYPPVPPPLPRPSPLSHFPENSSSNRSHPLSPKT
PSPKQHRVTIQSSTASSSLHPSAFSVETRICPARHGIAVSLCLVDTSGASSSRLVAVKET
ESEPRPIGWVSPNSWDFPGRGPNTAKQTSPVLGTSTPESGEATCKREDKGVIVSEITGLD
SHKHTNIKDTTRREPAGRTVAEGEYIDILQATMLFSRAQSSTEEPQKLEVQMQSHAQIKP
QMQRYPHRQAQMHPCAPMESYRQTQRQPNTQTSPQAQSRAHGQFPTKPQTQSHSGLEAAV
SLKPNMSDETALHHSTSHPPHPDPDCVEPFQCVRTVRFSEKPCTPCMRRRQGGKASKSQE
LRCRYRDSYQAAIQNPVPFGQEKDRGNMLAVVEEGGDFSQCEKRPLQTNAGRNVPGTWFD
SVSGAICKESGEKNIVPYWKTGDTNTAPCKDYGGTNVSKVGGLPEQTAERTTVRFTEPRD
LHNVNGTSLNDPNQSDATMNLTLKPRERLQSRNDSKGVGPHFPRSLSAPQNRHEFISDGR
CSSLSTAVVDTSEKCALVIVEGQNVRRRDDTGSCAEIPQLHVVKCKNSTAFGLVSPKINR
RQTVIPDAAQPGSKFLTSRSGHQMGNPSERDPPPAAETQKVSQSASSRPRPDHLPLGSPD
PRAQPLYSGLASITGGRDRTGRAIIELYGDHQGWRSSVTSQELLQMLLYFRTITRREIRE
AGLMLIFDSRRTNPQPQLYKALMTLQEQNPHAVNCFVLLVNKENSLRPERCPGIQQTEVV
TSMKALFKLVEMSQLSSCLDGTLPHSHCDWIELHQKLFPFVSDLHEAASLLLRAISELEE
PQGTDTVQTVQQCMMDQRTLMRHVLEDSRLVSLQREGGAILARLRKESDLKYPHCENLSD
AVDSVTSMYNQVEEQVHVLVQRSNMSLEHLEYLLQLREVEGHLMQMQQWFHIEGERHLLE
AESVNNSGEQMEQILNSFTGFLIEANDRKHHAITLVSEAERLQQSGFQYPETEASGTLVS
TFKSGLESFLVRAEACGRELQIMVNVCDFCEQATALASECIEYLGQTQPIIHTLQDCDPT
TTPVNHSITPPKQRQNQDPGLSTASRCPSDIRAARASCPTTTRVFLPSSDTSVLQTFQDR
FLQFSTEKFLEVKAQASALQGSRGMQVWNVAWLRCQEARQQLFERMQGVEEVFHNQSDSD
SLCELHYVDVVSTNVQSPSSGGQNLVVQSTPGPRHPQWEGIVSGAVDVGKRRPILGRNNT
NSTNVACCNVTPEDHSDAVTSQGSNVTPPSPQRSATRRRQTSRARSERDAAALSQSQTVG
CQWFPWGRGLRARSVSQDTSCTGEAAKELSPPSEQPLRPPSSCSHHGQPSCRILQEAQKF
QISRHGSFCSAESCESDGGAAGGNRNLYCKHSSLPTGRCEEAFCLATPQENASNALRLQR
VMEELVFTEREYVRSLGYILTHYLPLLDRPDIPQDLRGKRGVIFGNLEKLYDFHSHYFLP
ELEACQREPGMVARCFLRHSESFGLYALYSKNKPLSDALILHRRHDIFKKKQHELGDMMD
LSSYLLRPIQRISKYSLLLQDMLALAGSYRPKDMIQDTLLASSVCAQSVCGPGSRVPDLT
GNEPDRERAEIQAAADLVRFQMRHGNDLLTMDAIQECDVNLKEQGQLVRQDEFTVFFRKK
KCVRRVFLFEDLVLFSKTRRTDIGNDVYVYKQSFKTSDIGMTHNSSVNSLCFEIWFRRRK
RQDTYTLKASSMEVKKVWTTDLERILWNQATHSRELRMQERVFMGMGRKPFMDIQPSDAA
ISDRAVSCALAGRTPTVHMSKCP
NT seq
6012 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttgattctctggaaagctcgatccagtacctgttgtctgggctgtacccgccc
tttgaggccaccgcccccactctcctcagccagctcttccaaatcatcgatagtcgttat
cggggcgatgctctgcggtgcctgctggactttctggtcccagccaaacgcatcttagaa
accgtgcagcaggctgcatgcgctcagtactcggatgtacttttcctatgtgagggctgg
cctctgtgtttgcgtgaccaagttgtcatccacctcgctcccatcaacccctcgctactt
cagcctggcgacttttacctccaagtggcaccattctgtacccagtcagctcgcatcttg
gtctgcagcctcctggaagaggaagggcttatagtggaagttgtagaggagactccgatc
cttgatacatcctatccttgtctttttagttgtgactggttaaaggagatcaaccagggc
cgccatggaaggcctctcagccagtgcctgctcgccactgggcggggcgtggtgaggttg
ccatgggaacgggtggctgtgccggattttgtggatgtgccactgtgtgctgggagtagt
atggcctctgctcctcacacatatcctcctgtaccgcctccgcttcctcgtccttcacct
ctttctcattttcctgagaattcttcatccaatcgttcacatcctctttctccaaagaca
ccttcacctaagcagcatcgtgtaaccattcaaagttcaactgcatcatcttccttacac
ccctctgccttctctgtggagacccgaatatgtccagcgaggcacggcattgctgtgtca
ctctgcctggtggatactagcggtgcttcttcatctagacttgttgcagtgaaagagact
gagagtgaacctaggcctattggctgggtgtctcctaattcgtgggactttcctggaaga
ggcccaaatacagcaaaacaaactagccccgttttaggtactagcacccctgaaagtgga
gaagctacctgcaaacgtgaagataagggtgtaattgtttcagaaattacaggactagat
agtcataaacatacaaacattaaagacacaacaaggagagagccagcaggccgcactgtt
gctgaaggagaatatattgatatccttcaggcaactatgctttttagtagagctcagtca
tcaactgaagaaccgcaaaaattagaagtgcaaatgcaatcgcatgcacaaatcaaaccg
caaatgcaaagatatccacatagacaagcacaaatgcatccatgtgcaccaatggagtca
tacaggcaaacacagaggcagccaaacacacagacatcacctcaagcacagtcacgagca
catgggcagtttcctacaaaaccacaaacacaaagtcattctggattagaggctgctgta
tcattgaaacccaacatgtccgacgaaaccgctctccaccattccacatcccacccccct
cacccggaccctgactgcgttgaacctttccaatgtgtccgtacagtccgtttctcagag
aaaccctgcaccccgtgcatgaggagaaggcaaggcggaaaggcgtccaaatctcaggag
ctgaggtgtcgatacagggattcctaccaggctgctatacaaaaccctgtcccctttgga
caggagaaggacagggggaatatgttggctgtggtggaggagggtggggatttctcacag
tgtgagaaaagacctctgcagaccaacgcagggcgcaatgttccaggaacgtggtttgat
tctgtcagtggagccatctgtaaggagtcaggagagaagaacattgttccatattggaaa
accggagatacaaacactgccccctgtaaggactacggggggacaaatgtttcaaaagtt
ggtgggctaccagaacaaacagctgaaaggaccactgtgcgtttcacggaaccaagggat
ttacacaatgtgaacgggacaagcttgaacgatcctaaccagtcagatgcaacgatgaac
ttgaccctcaagcctcgtgaaaggctacaaagtagaaacgattccaagggagttggtcca
cactttcctcggtctctttcagcaccacagaacagacatgaattcatctcagatggaaga
tgttcatccctctccacagctgtggtggacacctcagaaaagtgtgccctggtcattgtt
gaaggtcaaaacgttagaagaagagacgatacagggtcctgtgcagagattccccagctg
catgtagtcaaatgtaagaacagcacagcctttggactggtttcacccaagatcaacagg
aggcagacggtcattccagatgctgctcagcctggcagcaagttcttaaccagtagaagt
ggccaccagatggggaacccgtcagagagagatccacctccagcagcagagacccagaag
gtctcccagtcggcctctagtcgtcccagacctgaccaccttcccctgggatcccctgac
cccagagcccagcccctctactcaggattggcctctatcacaggtggcagagacaggaca
ggcagggcgataattgagctctatggtgaccaccagggatggagatcttctgtaaccagt
caagaactcttacagatgctgctctacttccgcactatcaccaggagagaaatcagagaa
gctgggctgatgctaatttttgattcaaggaggacaaatcctcagccgcaactctataag
gccttaatgacgcttcaggagcagaatccccatgcagtaaattgttttgtgctgctggtg
aataaggagaacagccttcgaccagagaggtgtcccggcatccagcagactgaagtggtg
acatccatgaaagccttgttcaagctggtggagatgagtcagctcagctcctgcctggat
ggcacactgccccacagccactgtgactggatagagctgcaccagaaacttttcccattt
gtgtctgatcttcatgaggcggccagccttcttctgagggccatcagtgagttagaggag
ccccaggggacggacactgtacagactgtgcagcagtgcatgatggaccagaggactctg
atgagacatgtcctggaggacagtcgattagtcagcctgcagagggagggcggggccatc
ctagcgaggctgaggaaggagagtgacctcaaatacccgcattgtgagaacctcagtgac
gcagtggactcggtgacgagcatgtacaaccaggtggaggagcaggtgcatgtcctcgtg
cagaggtccaacatgtccctggaacacctggagtatctgctgcaactcagggaggtggag
ggacacttaatgcagatgcaacagtggtttcacatagaaggagagcgccacctgctggag
gctgaatcagtcaacaactctggagaacaaatggagcagatcctcaacagcttcactggt
ttccttatagaagcgaatgaccgaaagcaccatgccattacgttggtgtcggaggcagag
cgactccagcagagcgggttccagtacccagagacggaggcctccgggactctagtcagc
accttcaagtcgggcctggagagctttctggttagggcggaggcctgtggcagggagctt
cagatcatggtcaacgtgtgtgatttttgtgagcaggctacagctcttgccagcgaatgc
atcgagtacctgggtcagactcaacccataatccacacactgcaagactgtgacccgacc
acaacacctgtcaatcactcaatcactccgccaaaacagcgtcaaaaccaagaccccgga
ctgagcactgcatcccgttgcccgtctgatatccgagcagcacgtgcctcatgcccaacc
accaccagggtttttctgccaagcagtgacacctccgtcctccagacttttcaagacagg
ttccttcagttcagcacggagaaatttctggaggtgaaggctcaggccagcgccctccag
ggctccagggggatgcaggtctggaacgtagcctggctgagatgccaggaggccaggcag
cagctcttcgagaggatgcagggtgtggaggaggttttccacaaccaatcagattctgac
agcttgtgtgaacttcactatgttgatgtggtgagcaccaatgttcagtcgccgtcctcc
ggtggccagaatctggtggtacaatctacacccgggcctagacaccctcagtgggagggc
atcgtgtcgggagcagtggatgtggggaagagacggccaatcctgggcaggaacaacaca
aactcaacaaatgtggcctgctgtaacgtcacacctgaggatcacagtgatgctgtaacc
agccagggctcaaatgtcactccaccctctcctcaaaggtcagcgacaaggaggagacag
acgagcagagcgaggagtgagagagatgctgcggctttgtctcagtcccagactgtcggc
tgccagtggtttccatggggacggggtctcagagcgaggtcggtgagccaggacacttcc
tgcacaggagaagcagcaaaggagttatcccctccttcagagcagccccttcgacccccg
tcgtcctgctcccatcacggtcagccctcctgccggatcctccaggaggctcagaagttc
cagatctcccgccacgggagcttctgctcagcagagtcctgtgagagcgacgggggggca
gccgggggtaacaggaatttatactgcaaacactccagcttgcccaccgggagatgcgag
gaggcgttttgtttggcaactccacaggagaatgccagcaatgccctgaggctgcagcgt
gtcatggaggagctggtgttcacggagagggagtacgtacgctcgctgggctacatcttg
acccactacctgcccctgctggacagaccggatatcccccaggacctcaggggcaagaga
ggggtcatcttcggtaacctggagaagctttatgacttccacagtcattacttccttccc
gagctggaggcctgccaaagggagcctggcatggtggcccgctgctttctcagacatagt
gagagttttggtctgtacgctctgtacagcaagaacaaacctctgtccgatgcccttatc
ctccaccgtcgccatgacattttcaagaagaagcagcatgagctgggggacatgatggac
ctttcatcgtacctgctcaggcccatccagaggatcagcaagtacagcctcttgctgcag
gatatgctggctctggctggttcgtacaggccaaaagacatgatccaggatacactgctc
gcatccagtgtgtgcgcacaaagtgtgtgtggcccaggttcacgtgtccctgatctgacg
ggcaacgagccggaccgggagagggctgagatccaagctgctgccgatctggttcgtttt
cagatgcgacacggcaacgatttgctcaccatggacgccatccaggagtgcgatgtgaat
ttaaaagagcagggccagcttgttcgccaagatgagttcaccgttttctttcggaagaag
aaatgtgtccgccgcgtctttctctttgaggatctcgtcctcttcagcaagaccaggagg
acagatattggcaacgatgtttatgtctacaagcagtcatttaagacgagcgacattggg
atgacccacaactctagtgtgaacagcttgtgttttgagatctggtttcgcagaagaaaa
cgccaagacacctacaccctgaaggcctcaagcatggaggtgaagaaagtatggaccacc
gacctggagaggattctgtggaatcaagccacgcacagtcgagagctgcgcatgcaggag
agggtgttcatgggaatgggccgtaaacccttcatggacattcaacccagcgatgctgcc
atctccgaccgagcggtcagctgcgctctggccgggagaactcctactgtccacatgtcc
aagtgtccttga
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