Pungitius pungitius (ninespine stickleback): 119223394
Help
Entry
119223394 CDS
T07626
Symbol
rnf41
Name
(RefSeq) E3 ubiquitin-protein ligase NRDP1
KO
K11981
E3 ubiquitin-protein ligase NRDP1 [EC:
2.3.2.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
119223394 (rnf41)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ppug04131
]
119223394 (rnf41)
04121 Ubiquitin system [BR:
ppug04121
]
119223394 (rnf41)
03029 Mitochondrial biogenesis [BR:
ppug03029
]
119223394 (rnf41)
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119223394 (rnf41)
Membrane trafficking [BR:
ppug04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
119223394 (rnf41)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
119223394 (rnf41)
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
119223394 (rnf41)
Mitochondrial biogenesis [BR:
ppug03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
119223394 (rnf41)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP8_interact
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-rbx1
zf-RING_6
zf-Nse
zf-C3HC4_4
zf-RING_UBOX
zf-RING_5
zf-C3HC4_3
U-box
Sina_ZnF
zf-ANAPC11
zf-TRAF
SlyX
Rootletin
zf-RING_10
Trimer_CC
DUF641
zf-TRAF_2
DFF-C
LXG
Laminin_II
Sos7
DUF4795
TMF_DNA_bd
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
119223394
NCBI-ProteinID:
XP_037336584
LinkDB
All DBs
Position
1:complement(32463132..32466725)
Genome browser
AA seq
318 aa
AA seq
DB search
MGYDITRFQGEVDEDLLCPICSGVLEEPVQAPHCEHAFCNACITQWFAQQQICPVDRTVV
TLAHLRPVPRIMRNMLSKLQISCDNAGFGCTATLRLDQLQSHLKDCEHNPKRPVNCEEGC
GHEMPKDEVPNHNCIKHLRSVVQQQQTKISDLEKTVAEHKHQLGEQKRDIQLLKAYMRAI
RSANPNLQNLEESIEYNEILEWVNSMQPARVTRWGGMISTPDAVLQAVIKRSLIDSGCPL
SIVNDLIENAHERNWPQGLATLETRQMNRRYYENYVAKRIPGKQAVVVMACENQHMGEDM
ILEPGLVMIFAHGVEEIL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggggtacgacattacgaggttccaaggggaggtggatgaagacctgctgtgccctata
tgcagtggagtgctcgaagaaccagtgcaggctccacactgtgagcatgccttctgcaac
gcctgcataacgcagtggtttgcccagcagcagatctgtcctgttgaccgcacggtagtg
acgctagctcaccttcgacctgtgccccgcatcatgcgtaacatgctgtccaaacttcag
atcagctgtgacaacgcaggtttcggctgcacagccacgctgcggctggaccagctgcaa
tcacacctcaaggactgtgaacataaccccaaaaggcctgtcaactgcgaggagggatgt
gggcatgagatgcccaaagatgaggtgcccaaccataactgtattaaacacttgcggagc
gtcgtccagcagcaacagacaaagatttcggacctggagaaaacggttgcggagcataaa
caccagttgggggaacaaaaacgggacattcagctgctaaaagcctacatgagagcaatc
cgcagtgctaatcctaacctccaaaacctcgaggagagcattgagtacaacgagatcttg
gagtgggtgaactccatgcagcccgccagagtcacacgctgggggggcatgatctccacc
cccgacgccgtgcttcaagccgtcatcaagcgctccctcatcgacagcggctgtcccctc
tcaatcgtgaacgacctgatcgagaacgcccacgagcgaaactggccgcagggactggcc
acgctggagacgcggcagatgaacaggcgctactacgagaactacgtcgccaagcgtatc
cctggcaagcaggccgtggtggtgatggcctgcgagaatcagcatatgggggaggacatg
atcctggagccgggcctggtgatgatctttgcacacggagtggaggagatattataa
DBGET
integrated database retrieval system
