Pungitius pungitius (ninespine stickleback): 119223501
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Entry
119223501 CDS
T07626
Symbol
capn1
Name
(RefSeq) calpain-1 catalytic subunit
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04141
Protein processing in endoplasmic reticulum
ppug04210
Apoptosis
ppug04217
Necroptosis
ppug04218
Cellular senescence
ppug04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
119223501 (capn1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
119223501 (capn1)
04217 Necroptosis
119223501 (capn1)
04218 Cellular senescence
119223501 (capn1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
119223501 (capn1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ppug01002
]
119223501 (capn1)
Enzymes [BR:
ppug01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
119223501 (capn1)
Peptidases and inhibitors [BR:
ppug01002
]
Cysteine peptidases
Family C2: calpain family
119223501 (capn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
EF-hand_5
CAPN13-like_C_EFh
Sclerostin
Motif
Other DBs
NCBI-GeneID:
119223501
NCBI-ProteinID:
XP_037336736
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All DBs
Position
1:complement(3363330..3380890)
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AA seq
703 aa
AA seq
DB search
MSSLCATGMAAKLRSQWDRNDGLGQNHMAVKYLGQDYEGLRAQCAQAGRLFEDHLFPSAA
SSLGFNELGPRSAKTSGVRWMRPGEICKRPDFIVDGATRTDICQGALGDCWLLAAIASLT
LNDHLLNRVVPQGQGFQQGYAGIFHFQFWQFGEWVDVVIDDRLPVKDGKLLFVHSAEGTE
FWSALLEKAYAKLNGSYEALSGGSTSEGFEDFTGGVTEMFELGKAPPDLFSIIRRAIDRG
SLLGCSIETTSSNDREAVTFKKLVKGHAYSVTGVEEVVYRGNATKLVRIRNPWGEVEWTG
PWSDDSREWDSVDDSTRSRLRKRSEDGEFWMSYADFLREFSRLELCNLTADTLQASQPKK
WSSALYQGEWRKGSTAGGCRNFPATFWLNPQFKIALQHPDTGTSECSFLVGLMQKDRRKK
RQEGQDMETIGFALYEVPKEFVGCSGVHLKRDFFLTHASSARSELFINLREVSSRLRLPP
GEYVIVPSTFEPQKEGDFVLRVFSEKPADSQELDDDVKADLPTEVQLDESQIDPAFKNLF
RQLAGSDMEISLTELQTILNRIISKHKDLKTDGFTKESCRSMINLMDTDGSGKLGLSEFH
VLWEKIKRYLTIFRQFDLDKSGTMSSYEMRMALDSAGFKLTNTLFQLIILRYTEADMSVD
FDNFVTCLVRLETMFKTFHTLDTDKDGYMSLDFNQWITLTMFA
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgctctgtgcgaccggcatggccgccaagctgaggagccagtgggaccgcaac
gacggcctggggcagaaccacatggcggtgaagtacctgggtcaggactacgagggcctg
agggcccagtgcgcccaggccggcaggctgtttgaggaccacctgttccccagcgccgcg
tcgtccctgggcttcaacgagctcggcccgaggtccgccaagacgtctggagtgcgctgg
atgaggcccggggagatttgcaagcgccccgatttcatcgtggacggagcgacgcggacg
gacatctgtcagggggctctgggggactgctggctgctggcggccatcgcctcgctgacc
ttgaacgaccacctcctcaaccgagtggtcccccagggacagggcttccagcagggctac
gccggcatcttccacttccagttctggcagttcggcgagtgggtcgacgtggtgatcgac
gaccggctgccggtgaaggacggcaagctgctgttcgtgcactcggccgagggcaccgag
ttctggagcgcgctgctggagaaggcctacgccaagctcaacggcagctacgaggccctg
tcgggcggcagcacgtcggagggcttcgaggacttcacgggcggcgtgacggagatgttc
gagctgggcaaagccccccccgacctgttcagcatcatccggagggccatagacaggggc
tccctgctgggctgctccattgagacgaccagctccaatgaccgggaggccgtgacgttc
aagaagctggtgaagggacacgcctactccgtgaccggggtggaggaggtggtgtacaga
gggaacgccaccaagctggtccgcatcaggaacccgtggggggaggtggagtggaccggc
ccctggagcgacgactccagagagtgggacagcgtggacgactccaccagatctcggctg
cggaagcgcagcgaggacggcgagttctggatgtcctacgccgacttcctgcgcgagttc
agccgcctggagctgtgcaacctgacggcggacaccctgcaggccagccagcccaagaag
tggagctcggcgctgtaccagggcgagtggaggaagggcagcaccgccgggggctgcagg
aacttcccagcgaccttctggctgaacccccagttcaagatcgcgctgcagcacccggac
acgggcacgtccgagtgcagcttcctggtgggcctcatgcagaaggaccgcaggaagaaa
cgccaggagggccaagacatggagaccatcggcttcgccctctacgaggttccgaaggag
tttgtgggatgttcgggcgtccacctgaagagggacttcttcctcacgcacgcctccagc
gcccgctccgagctcttcatcaacttgcgggaggtcagctcgcggctgcggctgccgccc
ggcgagtacgtcatcgtgccgtccaccttcgagccgcagaaagagggcgacttcgtcctg
cgggttttctccgagaagcccgccgactcccaggagctcgatgacgacgtcaaagcggac
cttccgactgaggtccagctggacgagagccagatcgacccggccttcaaaaacctcttc
agacagctggcaggatcggacatggagatcagcctcacagagctgcagaccatcctgaat
cggatcataagcaaacacaaagacctgaagacggacggcttcacgaaggaatcctgtcgc
agcatgataaacctcatggacacggacggcagcggaaagctgggcctgagcgagttccac
gtcctgtgggagaagatcaagcgctacctgaccattttcaggcagtttgatttggacaaa
tcgggcaccatgagctcctacgagatgaggatggctctggactctgcaggtttcaagctg
accaacactctgttccagctgatcatcctgcgctacacggaggccgacatgtccgtcgac
tttgacaacttcgtcacctgtctggtccggctggagaccatgttcaaaaccttccacacc
ttggacacggacaaagacggctacatgtccctcgacttcaaccagtggatcaccctgacc
atgtttgcctga
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