Pungitius pungitius (ninespine stickleback): 119223524
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Entry
119223524 CDS
T07626
Symbol
poln
Name
(RefSeq) DNA polymerase nu
KO
K16618
DNA polymerase nu [EC:
2.7.7.7
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
119223524 (poln)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119223524 (poln)
Enzymes [BR:
ppug01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
119223524 (poln)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
A-family DNA polymerase
119223524 (poln)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_P_Exo
Motif
Other DBs
NCBI-GeneID:
119223524
NCBI-ProteinID:
XP_037336758
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All DBs
Position
1:complement(3974361..4008794)
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AA seq
922 aa
AA seq
DB search
MPPVDRENGRTATEDSGKESRSTPTVSQQRRPNRSGFTAPCLPGNHRRYDNELAANAKRS
FSRVLAGTSADGQNSSSGQDAASTTAKPGKRMKNSQLLSSLTHSRHPPIIPSFPLKRKHG
ELQRQYAEPTPKICLAGRHPKWEAPHPSQEKEREQGVGELKGAGSRTCNPERSAEPPEAH
TEAGPSHKTGRVSGAHGDSYASKQTQQIRQRKANERCKPFKHKGGKRGPDQEKDGPKVPH
EEARGTDPLNQSKAGSLTATLTSDPRVKDSGKMNPDEKIQTLEGAKKAEALVLTLVYRDG
TTQFDPEQKLTPEVCGLLVLLKNHPDGSTPEDLLGPNDSLVYLKLELTPAWAQQHTQQSK
DLFTRDMLLQVLSRSQLVVCYKAKDLLRTALQFYGPELGLKQVAGCHIQDPQVSGWLLDP
TDPSSCYRDLLNKHSRRPHTTPCLGTRQVSQVISGLYSLHWLNTELCFKLQSRGLWELYS
DMELSMISVLAAMESHRIHVDKEALKRTSDLLGTKMKQLEHEAHRAAGQLFLVTSNTQLR
TVLFEKLCLHERCENKKLPKTVNTQQQSTSEAALLQLQDLHPLPKIILEYRHVHKIKSTF
VDGILSCMASKNSVCSTWNQTSAVTGRISAKHPNFQALPRQPLQITKKQYVQGKEEEVVT
VHPRAMFVPQDGWTFLAADFCQVELRLLAHLSADPELLRIFLNPQADVFTMLASQWKGVS
EGEVTSEDREHAKRIVYSVVYGAGRERLSGILGVSAEQASRFQDGFLQAYRDVHAFIQRT
IQQCRKQGYVLSIMGRRRTLPNINSPDWAVRMQAERQAVNFVVQGSAADLCKMAMIRIFN
LVSSSSSLSARLVAQLHDELLYEVEDSQLEQFAGLVKSTMESLQHIGHLGVHLKVSLKVA
VSSGKSWGSMSELNVPTMSPPQ
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgccccccgtggacagagaaaatgggcgcacagctacagaggactcgggcaaagaaagt
cgttccacgccaacggtgtcccagcagcgaaggccaaataggtcagggttcacagctccc
tgtctccctgggaaccaccggcgctatgacaacgagctagcggctaatgcaaagagaagc
ttcagcagggtgctggccggcacgtctgctgacggacaaaactcctcctcaggacaggac
gctgcgtcgaccactgcaaaaccgggcaaaagaatgaaaaacagccagctgctttcttcc
ctaactcattcccgccatccccccatcatcccctccttccccttgaagaggaaacacgga
gaacttcagcgccaatatgcagaacctactcctaaaatctgcctagccgggcgtcatcca
aaatgggaagcacctcatccttctcaagaaaaggaaagggagcaaggagtcggcgagctg
aagggagccgggtccaggacctgtaaccccgaacgctcagcagaaccaccagaagcacat
actgaagccggtccttcacataaaacaggaagagtatcaggggctcatggagactcgtat
gcctcaaagcaaacacaacaaattcggcagagaaaggcgaatgaaaggtgcaaacccttt
aaacacaaggggggtaaacgtgggcctgaccaggaaaaagatggccccaaggtacctcat
gaggaggcccgcggtactgatcccttgaaccaatccaaagccggttctctgactgcaacc
ttgacatccgaccccagagtgaaggattctgggaagatgaacccggacgaaaaaatacaa
acgcttgagggggcaaagaaggccgaggcgctggtgctcaccttggtgtaccgagatgga
accactcagttcgacccggagcagaagctcaccccggaggtttgcggcctcctcgtactg
ttgaagaatcatcctgacggcagcacaccggaggacctgctcgggcccaacgacagtctg
gtctatttaaaactagagctcacacctgcatgggcccagcagcatacacaacagagcaag
gacctcttcactagagatatgctgctacaggtgctatcaagatctcagctggtggtgtgc
tataaagccaaggacttgcttcgtacagctttgcagttttatggacctgagctgggctta
aaacaagtggcggggtgtcacattcaggacccacaagtgtcagggtggctactggatcca
acagatccctcctcctgctacagagaccttctcaacaaacacagcagaagaccccataca
acaccttgcctgggaaccaggcaggtttcacaggtcatttcaggtctctattcgctccac
tggcttaacacggagctgtgcttcaaactccagagccgagggctgtgggagctgtactca
gacatggagctgagcatgatctctgtactggcagccatggagagccatcgcatccatgtg
gacaaagaagctctcaagagaacgtcagacctgctggggaccaagatgaagcagttggag
cacgaggcccaccgagcagcaggacaacttttccttgttaccagcaacactcaactacgt
acagtcctgtttgagaagctttgcctccacgagcgctgcgagaacaagaaacttcccaag
accgtcaacacgcagcagcagtcgacctcagaagccgcactgttgcagcttcaggacctt
cacccactgccgaagatcattctggagtacagacatgttcacaagatcaagtctactttt
gttgatgggatcctctcatgcatggcgagcaagaactccgtttgctccacatggaaccag
acaagtgccgtgacggggagaatctcagccaagcacccaaacttccaggccctgccgagg
caaccacttcaaatcaccaagaagcagtacgtccaaggaaaggaggaggaggtggtgact
gttcatcctcgagcgatgttcgtccctcaggacggatggacgtttctcgctgcagacttt
tgccaggtggagcttcgtctgcttgcccacctctccgctgaccctgagctgctccgcatt
tttctcaacccacaggcggacgtctttaccatgttggcctctcagtggaagggggtgagt
gagggtgaggtgacgtctgaggatcgggaacacgccaaacgcatcgtttactctgttgtg
tacggggcaggtcgtgagcgtctgtccgggatcctcggggtgagcgccgagcaggccagc
cggttccaggacggcttcctgcaggcctacagagacgtccacgctttcatccagaggacc
atccagcagtgccgcaagcaaggctacgtgctctccatcatgggtcgtcgacggaccctt
cccaacatcaactcccccgattgggctgtacgcatgcaggctgagaggcaggcagtgaac
tttgtggtgcaagggtctgctgctgacctctgtaagatggccatgatcagaatcttcaac
ctggtctcctcctccagctccctctctgccaggctggtggcacagctccacgacgagctc
ctctacgaggtggaggactcccagctggagcagtttgcaggtctggtgaagagcaccatg
gagtcccttcagcacatcggccatctaggagtgcaccttaaggtctccctgaaggtggcg
gtctccagtggcaagtcttggggatccatgtctgagcttaatgtccctaccatgtccccg
ccccaataa
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