Pungitius pungitius (ninespine stickleback): 119223649
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Entry
119223649 CDS
T07626
Symbol
her9
Name
(RefSeq) hairy-related 9 isoform X1
KO
K06054
hairy and enhancer of split 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03460
Fanconi anemia pathway
ppug04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
119223649 (her9)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
119223649 (her9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ppug03000
]
119223649 (her9)
03400 DNA repair and recombination proteins [BR:
ppug03400
]
119223649 (her9)
Transcription factors [BR:
ppug03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
119223649 (her9)
DNA repair and recombination proteins [BR:
ppug03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
119223649 (her9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
119223649
NCBI-ProteinID:
XP_037336927
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All DBs
Position
1:28345180..28347099
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AA seq
291 aa
AA seq
DB search
MPADTMEKQTASPLAGAPANGTHTPDKPKNASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNLQRVQMSAALSADATVISKYRAGFNECMNE
VTRFLSTSEGVNTEVRSRLLNHLSSCMGQMMSINYPQQAASQQAHLAQPLHVQLPSTLPL
NAAALGSKLSPAEAISPKVFGGFQLVPASDGQFAFLIPNPAFSSATAPVIPLYANAGVPV
TVNASPVHGGSASTAASPIHGMTSFSVGSQAVSPVGVSAGSEGNEPVWRPW
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgccagctgacaccatggagaagcagacggcatccccgctggccggtgcccctgcaaac
ggaacacacacgccggacaaacccaaaaatgccagcgagcatagaaaatcatcgaaaccc
atcatggaaaaacggcgtagagccagaataaacgaaagccttgggcagctcaagactctc
atcctggacgcacttaaaaaagatagctccaggcattcgaagttggagaaagcagatatc
ctggaaatgacagtaaagcacttgaggaacctgcagcgtgtccagatgagcgcagcactc
tcagcagatgccaccgtcataagcaaatatagagcaggattcaacgagtgcatgaacgag
gtcacccgcttcctgtccacctcagagggggtgaacacggaggtgaggtcgaggctcctc
aaccacctgtccagctgcatgggccagatgatgtccatcaactacccgcagcaggccgcg
tcccagcaggcgcacctggctcagccgctgcacgtgcagctgccatccaccctgcccctc
aacgccgcggctctgggctccaaactgagccccgcggaggccatctcccccaaggtcttc
ggcggctttcagctggtgcccgcaagcgatggacagtttgcatttttgatccccaaccca
gccttctcctccgccacggcccccgtcatcccgctttacgcaaacgcaggagtgcccgtt
acggtcaacgccagtccggtgcacgggggctcggcatcgaccgcggcttcgcccatccac
ggcatgacgtctttctccgtgggctcccaggcggtcagtccggtgggagtgagcgccggc
tcggagggcaacgagccggtgtggaggccttggtag
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integrated database retrieval system
