Pungitius pungitius (ninespine stickleback): 119223762
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Entry
119223762 CDS
T07626
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
119223762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ppug04121
]
119223762
Enzymes [BR:
ppug01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
119223762
Ubiquitin system [BR:
ppug04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
119223762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
zf-RING_5
U-box
zf-RING_10
zf_RING_Vps8
zf-UBR
Motif
Other DBs
NCBI-GeneID:
119223762
NCBI-ProteinID:
XP_062419252
LinkDB
All DBs
Position
1:23267888..23272058
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AA seq
524 aa
AA seq
DB search
MSLSKPEELLAHELSCPICLQLFSDPVVLPCGHNYCLSCIRMTADSMDKTSPRCPECREE
FQGVETLKKNFKLCSIIEGYQAAGPRGGDESEALCDRCIDKESPAAESCLLGDASPCSGR
LQGHQEKEWDARSCPIHRRPLEYLCSDDMSLMCGICFTEGRHCNHDVLTFDAAEEEMRRA
LENRRTLVSQRLQMTESLLQMTAKEQGAAEAIGDKLANKAVSVMESMATLVDGYRDCLRE
LLEEERNMRRKSWQVGLEALEEQQQQLVEAQRSATQVLSETDTCIFMHRFMQVEPKLREV
ATSAIPCGVPSKAPLNPKRLQAGLKTQDFRSEMTRHLDSLHILLNPLELTFNLCTAHPNL
LVSSDQRTVKYSPVKQPYPDHPERFTSAPQILCTQGFTGGEHVWVVEVGGSSMWSMGVCY
KSIPRRGDHSRLGHNSVSWRLQWKNGKLTVCNSSCNVALGEMSHHPLRVEIALDYEAGTL
MFHNIRGRREHLHTFRAVFREAVYPAFSMHSHTPESWITLHNGM
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgtccaagcccgaggagctgctggcccacgagctgagctgccccatctgcctc
cagctcttctccgatcccgtggttctcccctgcgggcacaactactgtctgtcctgcatt
cgcatgaccgccgactccatggacaagacgtctccgcgttgcccggagtgtcgcgaggag
ttccagggcgtggagaccctgaagaagaacttcaagctgtgcagcatcatcgagggctac
caagccgccgggccgaggggcggagacgagtcggaggctctctgcgaccgatgcatcgac
aaggagtcgccggcggcggagtcgtgcctgctgggcgacgcgtcgccgtgctccggccgc
ctccaggggcaccaggagaaggagtgggacgcgaggagctgccccatccaccggcgtccc
ctcgagtacctttgctccgacgacatgagcctgatgtgcggcatctgcttcacggagggc
cgccactgcaaccacgacgtgctcaccttcgacgcggccgaagaggagatgaggcgggcg
ctggagaaccgcaggacgctggtttctcagaggctgcagatgaccgagagtctcctccag
atgacagcaaaggagcagggagcggctgaagccattggggacaaactggccaacaaggcg
gtctctgtcatggagagtatggctactttggtggacgggtacagggactgtctgcgtgag
ctgttggaggaggagaggaacatgcgcaggaaaagctggcaggtgggactagaagctctc
gaagagcaacagcagcagttagtggaggcccagcgaagtgccacgcaggtcctcagcgag
acagacacgtgcatcttcatgcacaggttcatgcaggtcgaacccaagctgagagaagtt
gccacaagcgccattccctgcggggtcccctccaaagcaccgctcaaccccaagcgtctc
caggcgggcctcaaaacccaggacttccgctcagagatgacccgccacctggactccctc
cacatactgctgaaccccctggagctcaccttcaacctctgcaccgcccaccccaacctg
ttggtgtccagtgatcagcgtacggtcaagtacagccccgtcaagcagccgtacccggat
cacccggagcgcttcacgagcgcgccccagattctctgcacccaggggttcacagggggg
gagcacgtgtgggtggtggaggtggggggcagcagcatgtggtcgatgggcgtgtgttac
aagagcatccctcgccgtggggaccacagccgtctgggtcacaactcagtttcctggcgg
ctgcagtggaaaaacggcaagctaacggtgtgcaattcgtcctgcaacgtggctctgggg
gaaatgagccatcatccactgagggttgagatagcactggactacgaggcggggacgctg
atgttccacaacatcagagggcgcagggagcacctccacactttcagggctgtgttcagg
gaggcggtttatccagcgttcagcatgcattcacacacaccagagtcctggatcacactg
cacaatgggatgtga
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