Pungitius pungitius (ninespine stickleback): 119224306
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Entry
119224306 CDS
T07626
Name
(RefSeq) protocadherin-20
KO
K16498
protocadherin delta 1
Organism
ppug
Pungitius pungitius (ninespine stickleback)
Pathway
ppug03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
ppug00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
119224306
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ppug01009
]
119224306
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ppug04515
]
119224306
Protein phosphatases and associated proteins [BR:
ppug01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
119224306
Cell adhesion molecules [BR:
ppug04515
]
Cadherins
Protocadherins
119224306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
DUF6899
Motif
Other DBs
NCBI-GeneID:
119224306
NCBI-ProteinID:
XP_037337185
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Position
4:9425280..9429640
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AA seq
872 aa
AA seq
DB search
MFHCRHPSLSKRGGIWGLCILLLYTSPLSCFANFSQAKELIYKIKEGLPRGTFIGAIGVD
LNLDFTVKPPFLFSLPKKKVSGQYVNLNNTTGELYTSATEIDRENFCPYHSDGRGCFLSL
DVFVLPQQYFQLVKVKIFIEDVNDNRPKFPVDEIRISVPENTPINARYAVEQSAVDPDLG
VHGVQTYWLVNDFGMFTLDVEENEGGELTPFLIVIEALDRETQAEYITDIIAEDGGTPPL
LGAATLKIVITDVNDNCPQFTESQMNVTLHGNATKGATLARLNAFDPDLGANAQISYAYS
ERVPRDVRSLFHLDRITGFIKLAGKVDTGTATFYKLTILANGPGCIPAVATVFVYLIKVV
TGPPAVIPRYIAQEKDGVVTIKESEPEFTPIAFYTVKNIAMNQRVDCHLEGSGPFRLVPY
QLLKNEYLLETTEPLDYEKTREYELIVVAKNSHELVIKTFLKVQVLDENDNVPVFQQSWV
EISVEENNPPNTFLTQLQATDQDSESRGEVIYLLGGNAPGIFVVDRLTGVLTVTTSLDRE
EKETYRFIARAVDQGTPRRESIATVVVSVLDRNDNSPRFINKDFTFFVPENFPGYGEIGV
LSVTDADAGENGWVALSILNGSDIFMIDTGRGALRAKTSLDREQQGTYQLWIEAVDGGEP
ALSCVTTVTVLLVDVNDNPPIVLFPQSNQSYMLVLPDTLPGTSITEVYAVDKDTGMNAVI
AYSIVKRKGGEPGSFAIDPETGNITLKKELSIRGLYRLLVKVSDHGHPEPLYSTVMVNFF
VNETVSNESYIHSLLTREAEIEVEERPWYKGQMTEGPERYELFPCQPLLIALSVTCLGLF
FSVVTLTSYICCRRFKKRKRKKRSEVEIPLKI
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgttccactgcagacacccaagccttagcaaaagaggagggatatggggattgtgcatc
ctcttgctttacaccagccccctttcctgttttgcgaatttcagccaggcgaaagagctg
atctataagataaaggaaggattacccagggggacttttattggggccattggagtagac
ttaaatttggatttcactgtgaagcccccctttttattcagtctcccgaaaaagaaggtc
agtggacagtatgttaacctaaataataccaccggggagctttatacctctgctacggag
attgacagggagaacttctgcccatatcactcagacggacggggctgcttcctctcactg
gatgtgtttgtgttgccccagcagtactttcagctggtcaaagttaagatcttcatcgag
gatgtgaatgacaacagacccaagttccccgtggatgagatccgtatatctgtcccagaa
aacaccccaatcaatgctcgttatgcagtggagcagtcagcggtggacccggaccttggc
gttcacggagtgcagacctactggctggtcaacgactttggaatgttcacactggatgtt
gaggaaaatgagggcggtgagttgacacccttcctcattgtgatagaggcgttggacaga
gagacccaggctgagtacattacagatatcattgcagaggacggagggacccctcctctg
cttggagcggcgacgttgaaaattgtcatcacagatgtgaatgataactgcccccaattc
acagagtcgcaaatgaacgtcactttgcatgggaatgccaccaaaggggcgactttggca
cgtctgaacgcttttgaccctgaccttggtgctaatgctcagatcagctatgcttacagt
gaacgcgtgccaagggacgtcaggagcttgttccatttggacagaatcacagggtttatc
aagctagcagggaaagtagacactggcacagccacgttttacaaactcaccattttggcc
aatggacctggttgtatccctgcagtagctactgtttttgtctatttaatcaaagttgtc
acaggaccccccgctgtcataccccgatatattgcacaagaaaaggacggggtggtgacc
ataaaggagtctgaaccagagtttactccaatcgctttttatactgtcaaaaacattgct
atgaaccaaagggtagattgccatttggaaggttccggccccttcaggcttgtgccctat
cagcttttaaaaaatgaatacctgttggagactacagagcccttggactatgagaagacc
cgggagtacgagcttattgtggttgccaaaaattctcatgaacttgtcatcaagaccttt
ctcaaggtgcaggttttggatgagaatgataacgtaccagtgtttcaacagtcttgggtg
gaaatatctgtggaggagaacaatccaccaaacacctttctgacccagctccaagctaca
gaccaggacagcgaaagcagaggggaagtcatctacctccttggcggtaacgccccaggg
atcttcgttgttgatcgcctgaccggtgtcctgactgtaaccacatcgcttgaccgcgag
gagaaggagacgtaccggttcatagcgagagcggtggatcagggaacgcccaggagggag
tccattgcaactgtggtggtgagcgtgctggaccgcaatgacaacagtccgcgcttcatc
aacaaggacttcacgttctttgtgcccgagaacttcccggggtacggtgaaatcggggtc
ctctctgtgacagacgccgatgcaggggaaaatggttgggtcgccctttccatcctcaat
ggcagcgacatcttcatgatagacacaggccgaggtgcactgagggcaaagacatcactc
gaccgcgagcaacaagggacataccagctgtggattgaggccgtcgatggtggagagcct
gcgctttcttgcgtcactacggtgactgtgctgctggtggatgtaaatgacaatccccct
attgtcctcttcccccagtccaatcagtcttacatgctggttctacctgatacactaccg
gggacatcaataacagaggtctacgctgtggataaggacacgggcatgaatgctgtgatt
gcctacagtatcgttaagaggaaaggtggcgagccaggttccttcgccattgacccagaa
acaggaaatatcacattaaagaaggagcttagcatccggggcctatacagacttctggtc
aaggtcagtgaccatggtcaccctgagccactttactcaacagtgatggttaacttcttt
gtcaatgaaacagtgagcaacgagagctacatacacagccttctgaccagggaggctgaa
atcgaggtagaggagagaccctggtacaaaggccagatgacagaggggcctgagaggtat
gagttgttcccctgtcagcctctcctcattgctctgtcagtgacatgtctggggctgttc
ttctcagttgtcacactgacatcttacatatgctgtaggagatttaaaaaaagaaaaaga
aagaaaagatctgaggttgagatacctttgaaaatataa
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